RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 SGK3Q96BR1 496 aa16.01■□□□□ 0.15
VPS33A-205ENST00000541169 SLC30A2Q9BRI3 323 aa16.01■□□□□ 0.15
VPS33A-205ENST00000541169 AMBNQ9NP70 447 aa16.01■□□□□ 0.15
VPS33A-205ENST00000541169 BRD7Q9NPI1 651 aa16.01■□□□□ 0.15
VPS33A-205ENST00000541169 DLL4Q9NR61 685 aa16.01■□□□□ 0.15
VPS33A-205ENST00000541169 CHCHD3Q9NX63 227 aaKnown RBP16.01■□□□□ 0.15
VPS33A-205ENST00000541169 GNG8Q9UK08 70 aa16.01■□□□□ 0.15
VPS33A-205ENST00000541169 DIMT1Q9UNQ2 313 aaKnown RBP16.01■□□□□ 0.15
VPS33A-205ENST00000541169 EXOSC1Q9Y3B2 195 aaKnown RBP16.01■□□□□ 0.15
VPS33A-205ENST00000541169 N6AMT1Q9Y5N5 214 aa16.01■□□□□ 0.15
VPS33A-205ENST00000541169 TEX15Q9BXT5 2789 aa16.01■□□□□ 0.15
VPS33A-205ENST00000541169 CCDC168Q8NDH2 2452 aa16■□□□□ 0.15
VPS33A-205ENST00000541169 IFNL4K9M1U5 179 aa16■□□□□ 0.15
VPS33A-205ENST00000541169 PSMD9O00233 223 aa16■□□□□ 0.15
VPS33A-205ENST00000541169 SSX4O60224 188 aa16■□□□□ 0.15
VPS33A-205ENST00000541169 FAM20BO75063 409 aa16■□□□□ 0.15
VPS33A-205ENST00000541169 APOL3O95236 402 aa16■□□□□ 0.15
VPS33A-205ENST00000541169 IGHV1-46P01743 117 aa16■□□□□ 0.15
VPS33A-205ENST00000541169 DAOP14920 347 aa16■□□□□ 0.15
VPS33A-205ENST00000541169 MYF6P23409 242 aa16■□□□□ 0.15
VPS33A-205ENST00000541169 PDLIM4P50479 330 aa16■□□□□ 0.15
VPS33A-205ENST00000541169 OR8B8Q15620 311 aa16■□□□□ 0.15
VPS33A-205ENST00000541169 CLEC12BQ2HXU8 276 aa16■□□□□ 0.15
VPS33A-205ENST00000541169 BCL2L15Q5TBC7 163 aa16■□□□□ 0.15
VPS33A-205ENST00000541169 FDX2Q6P4F2 183 aa16■□□□□ 0.15
VPS33A-205ENST00000541169 TMPRSS11AQ6ZMR5 421 aa16■□□□□ 0.15
VPS33A-205ENST00000541169 DNM1P46Q6ZS02 220 aa16■□□□□ 0.15
VPS33A-205ENST00000541169 ZNF786Q8N393 782 aa16■□□□□ 0.15
VPS33A-205ENST00000541169 RFLNBQ8N5W9 214 aa16■□□□□ 0.15
VPS33A-205ENST00000541169 CELF2-AS1Q8N7Q2 184 aa16■□□□□ 0.15
VPS33A-205ENST00000541169 OR8B12Q8NGG6 310 aa16■□□□□ 0.15
VPS33A-205ENST00000541169 OR52I1Q8NGK6 324 aa16■□□□□ 0.15
VPS33A-205ENST00000541169 UBASH3BQ8TF42 649 aa16■□□□□ 0.15
VPS33A-205ENST00000541169 RDH5Q92781 318 aa16■□□□□ 0.15
VPS33A-205ENST00000541169 PBOV1Q9GZY1 135 aa16■□□□□ 0.15
VPS33A-205ENST00000541169 SAP30LQ9HAJ7 183 aa16■□□□□ 0.15
VPS33A-205ENST00000541169 ERVK13-1Q9NX77 482 aa16■□□□□ 0.15
VPS33A-205ENST00000541169 SCN3BQ9NY72 215 aa16■□□□□ 0.15
VPS33A-205ENST00000541169 AASSQ9UDR5 926 aa16■□□□□ 0.15
VPS33A-205ENST00000541169 IL19Q9UHD0 177 aa16■□□□□ 0.15
VPS33A-205ENST00000541169 USF3Q68DE3 2245 aa16■□□□□ 0.15
VPS33A-205ENST00000541169 CSMD2Q7Z408 3487 aa15.99■□□□□ 0.15
VPS33A-205ENST00000541169 hCG_38984A0A1B0GV85 526 aa15.99■□□□□ 0.15
VPS33A-205ENST00000541169 DHRS7CA6NNS2 312 aa15.99■□□□□ 0.15
VPS33A-205ENST00000541169 ANKRD30BLA7E2S9 258 aa15.99■□□□□ 0.15
VPS33A-205ENST00000541169 PRR32B1ATL7 298 aa15.99■□□□□ 0.15
VPS33A-205ENST00000541169 TPD52L2O43399 206 aaKnown RBP15.99■□□□□ 0.15
VPS33A-205ENST00000541169 SRSF10O75494 262 aaKnown RBP15.99■□□□□ 0.15
VPS33A-205ENST00000541169 ZNF12P17014 697 aa15.99■□□□□ 0.15
VPS33A-205ENST00000541169 MAP2K3P46734 347 aa15.99■□□□□ 0.15
VPS33A-205ENST00000541169 SRP9P49458 86 aaKnown RBP15.99■□□□□ 0.15
VPS33A-205ENST00000541169 FAM3AP98173 230 aa15.99■□□□□ 0.15
VPS33A-205ENST00000541169 SMN1Q16637 294 aaKnown RBP15.99■□□□□ 0.15
VPS33A-205ENST00000541169 ZBTB37Q5TC79 503 aa15.99■□□□□ 0.15
VPS33A-205ENST00000541169 SSX6Q7RTT6 188 aa15.99■□□□□ 0.15
VPS33A-205ENST00000541169 TGIF2LYQ8IUE0 185 aa15.99■□□□□ 0.15
VPS33A-205ENST00000541169 ELMOD2Q8IZ81 293 aa15.99■□□□□ 0.15
VPS33A-205ENST00000541169 OR2AE1Q8NHA4 323 aa15.99■□□□□ 0.15
VPS33A-205ENST00000541169 FAM168AQ92567 244 aa15.99■□□□□ 0.15
VPS33A-205ENST00000541169 ELMOD3Q96FG2 381 aa15.99■□□□□ 0.15
VPS33A-205ENST00000541169 TMEM80Q96HE8 168 aa15.99■□□□□ 0.15
VPS33A-205ENST00000541169 ZNF184Q99676 751 aaPredicted RBP15.99■□□□□ 0.15
VPS33A-205ENST00000541169 ALG8Q9BVK2 526 aa15.99■□□□□ 0.15
VPS33A-205ENST00000541169 TPK1Q9H3S4 243 aa15.99■□□□□ 0.15
VPS33A-205ENST00000541169 OR52A1Q9UKL2 312 aa15.99■□□□□ 0.15
VPS33A-205ENST00000541169 PRRC2AP48634 2157 aaKnown RBP15.99■□□□□ 0.15
VPS33A-205ENST00000541169 CREBBPQ92793 2442 aa15.98■□□□□ 0.15
VPS33A-205ENST00000541169 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.98■□□□□ 0.15
VPS33A-205ENST00000541169 ZSCAN5BA6NJL1 495 aa15.98■□□□□ 0.15
VPS33A-205ENST00000541169 MAST4O15021 2626 aa15.98■□□□□ 0.15
VPS33A-205ENST00000541169 SPRY3O43610 288 aa15.98■□□□□ 0.15
VPS33A-205ENST00000541169 SLC25A16P16260 332 aa15.98■□□□□ 0.15
VPS33A-205ENST00000541169 ACHEP22303 614 aa15.98■□□□□ 0.15
VPS33A-205ENST00000541169 CRYBB2P43320 205 aa15.98■□□□□ 0.15
VPS33A-205ENST00000541169 GSK3AP49840 483 aa15.98■□□□□ 0.15
VPS33A-205ENST00000541169 CCR9P51686 369 aa15.98■□□□□ 0.15
VPS33A-205ENST00000541169 CCL8P80075 99 aa15.98■□□□□ 0.15
VPS33A-205ENST00000541169 TNFAIP6P98066 277 aaPredicted RBP15.98■□□□□ 0.15
VPS33A-205ENST00000541169 SLC3A1Q07837 685 aa15.98■□□□□ 0.15
VPS33A-205ENST00000541169 ALKBH6Q3KRA9 238 aa15.98■□□□□ 0.15
VPS33A-205ENST00000541169 KRT74Q7RTS7 529 aa15.98■□□□□ 0.15
VPS33A-205ENST00000541169 ZCCHC24Q8N2G6 241 aaKnown RBP15.98■□□□□ 0.15
VPS33A-205ENST00000541169 PLPP7Q8NBV4 271 aa15.98■□□□□ 0.15
VPS33A-205ENST00000541169 OR2Z1Q8NG97 314 aa15.98■□□□□ 0.15
VPS33A-205ENST00000541169 ERGIC1Q969X5 290 aa15.98■□□□□ 0.15
VPS33A-205ENST00000541169 SIGLEC11Q96RL6 698 aa15.98■□□□□ 0.15
VPS33A-205ENST00000541169 CHODLQ9H9P2 273 aa15.98■□□□□ 0.15
VPS33A-205ENST00000541169 MSL2Q9HCI7 577 aa15.98■□□□□ 0.15
VPS33A-205ENST00000541169 PSORS1C1Q9UIG5 152 aa15.98■□□□□ 0.15
VPS33A-205ENST00000541169 MYRFQ9Y2G1 1151 aa15.98■□□□□ 0.15
VPS33A-205ENST00000541169 CAB39Q9Y376 341 aaPredicted RBP15.98■□□□□ 0.15
VPS33A-205ENST00000541169 MYO9AB2RTY4 2548 aa15.98■□□□□ 0.15
VPS33A-205ENST00000541169 NDUFS7O75251 213 aa15.97■□□□□ 0.15
VPS33A-205ENST00000541169 CCDC159P0C7I6 412 aa15.97■□□□□ 0.15
VPS33A-205ENST00000541169 UBCP0CG48 685 aaKnown RBP15.97■□□□□ 0.15
VPS33A-205ENST00000541169 GIFP27352 417 aa15.97■□□□□ 0.15
VPS33A-205ENST00000541169 GNALP38405 381 aa15.97■□□□□ 0.15
VPS33A-205ENST00000541169 TMEM33P57088 247 aa15.97■□□□□ 0.15
VPS33A-205ENST00000541169 HFEQ30201 348 aa15.97■□□□□ 0.15
VPS33A-205ENST00000541169 CCDC58Q4VC31 144 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms