RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 FKBP9P1Q75LS8 142 aa22.06■■□□□ 1.12
CHFR-218ENST00000540963 VMO1Q7Z5L0 202 aa22.06■■□□□ 1.12
CHFR-218ENST00000540963 ARPINQ7Z6K5 226 aa22.06■■□□□ 1.12
CHFR-218ENST00000540963 NAA40Q86UY6 237 aa22.06■■□□□ 1.12
CHFR-218ENST00000540963 FAM90A1Q86YD7 464 aa22.06■■□□□ 1.12
CHFR-218ENST00000540963 OR6V1Q8N148 313 aa22.06■■□□□ 1.12
CHFR-218ENST00000540963 GCSAMQ8N6F7 178 aa22.06■■□□□ 1.12
CHFR-218ENST00000540963 HSH2DQ96JZ2 352 aa22.06■■□□□ 1.12
CHFR-218ENST00000540963 KRCC1Q9NPI7 259 aaPredicted RBP22.06■■□□□ 1.12
CHFR-218ENST00000540963 PNRC2Q9NPJ4 139 aaKnown RBP22.06■■□□□ 1.12
CHFR-218ENST00000540963 ABCD2Q9UBJ2 740 aa22.06■■□□□ 1.12
CHFR-218ENST00000540963 ENPP4Q9Y6X5 453 aa22.06■■□□□ 1.12
CHFR-218ENST00000540963 CCDC22O60826 627 aa22.05■■□□□ 1.12
CHFR-218ENST00000540963 FCN3O75636 299 aa22.05■■□□□ 1.12
CHFR-218ENST00000540963 SERPINA1P01009 418 aa22.05■■□□□ 1.12
CHFR-218ENST00000540963 OPN1MWP04001 364 aa22.05■■□□□ 1.12
CHFR-218ENST00000540963 OPN1MW2P0DN77 364 aa22.05■■□□□ 1.12
CHFR-218ENST00000540963 OPN1MW3P0DN78 364 aa22.05■■□□□ 1.12
CHFR-218ENST00000540963 LY6G5BQ8NDX9 201 aa22.05■■□□□ 1.12
CHFR-218ENST00000540963 OR5R1Q8NH85 324 aa22.05■■□□□ 1.12
CHFR-218ENST00000540963 EFCAB1Q9HAE3 211 aa22.05■■□□□ 1.12
CHFR-218ENST00000540963 C1orf123Q9NWV4 160 aa22.05■■□□□ 1.12
CHFR-218ENST00000540963 FBLN5Q9UBX5 448 aa22.05■■□□□ 1.12
CHFR-218ENST00000540963 GPR37O15354 613 aa22.04■■□□□ 1.12
CHFR-218ENST00000540963 RENP00797 406 aa22.04■■□□□ 1.12
CHFR-218ENST00000540963 H1F0P07305 194 aaKnown RBP22.04■■□□□ 1.12
CHFR-218ENST00000540963 GGT2P36268 569 aa22.04■■□□□ 1.12
CHFR-218ENST00000540963 EGR3Q06889 387 aa22.04■■□□□ 1.12
CHFR-218ENST00000540963 SMARCD3Q6STE5 483 aa22.04■■□□□ 1.12
CHFR-218ENST00000540963 ZBTB46Q86UZ6 589 aa22.04■■□□□ 1.12
CHFR-218ENST00000540963 LINC00346Q8IVM7 164 aa22.04■■□□□ 1.12
CHFR-218ENST00000540963 CMTM4Q8IZR5 234 aa22.04■■□□□ 1.12
CHFR-218ENST00000540963 SPTSSAQ969W0 71 aa22.04■■□□□ 1.12
CHFR-218ENST00000540963 ELAC2Q9BQ52 826 aaKnown RBP22.04■■□□□ 1.12
CHFR-218ENST00000540963 SRA1Q9HD15 236 aaKnown RBP22.04■■□□□ 1.12
CHFR-218ENST00000540963 C14orf119Q9NWQ9 140 aa22.04■■□□□ 1.12
CHFR-218ENST00000540963 KCNG2Q9UJ96 466 aa22.04■■□□□ 1.12
CHFR-218ENST00000540963 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP22.03■■□□□ 1.12
CHFR-218ENST00000540963 M0R135 149 aa22.03■■□□□ 1.12
CHFR-218ENST00000540963 ARPC3O15145 178 aa22.03■■□□□ 1.12
CHFR-218ENST00000540963 MUC1P15941 1255 aaPredicted RBP22.03■■□□□ 1.12
CHFR-218ENST00000540963 HSP90B2PQ58FF3 399 aa22.03■■□□□ 1.12
CHFR-218ENST00000540963 SAMD5Q5TGI4 173 aa22.03■■□□□ 1.12
CHFR-218ENST00000540963 C11orf88Q6PI97 169 aa22.03■■□□□ 1.12
CHFR-218ENST00000540963 ST8SIA4Q92187 359 aa22.03■■□□□ 1.12
CHFR-218ENST00000540963 ZNF799Q96GE5 643 aa22.03■■□□□ 1.12
CHFR-218ENST00000540963 ERMAPQ96PL5 475 aaPredicted RBP22.03■■□□□ 1.12
CHFR-218ENST00000540963 GGT3PA6NGU5 568 aa22.02■■□□□ 1.12
CHFR-218ENST00000540963 UNC119BA6NIH7 251 aa22.02■■□□□ 1.12
CHFR-218ENST00000540963 G3V4G9 280 aa22.02■■□□□ 1.12
CHFR-218ENST00000540963 EEF1B2P24534 225 aaKnown RBP22.02■■□□□ 1.12
CHFR-218ENST00000540963 NUDT2P50583 147 aa22.02■■□□□ 1.12
CHFR-218ENST00000540963 PSME3P61289 254 aa22.02■■□□□ 1.12
CHFR-218ENST00000540963 ZNF92Q03936 586 aa22.02■■□□□ 1.12
CHFR-218ENST00000540963 HERPUD1Q15011 391 aa22.02■■□□□ 1.12
CHFR-218ENST00000540963 RFX4Q33E94 735 aa22.02■■□□□ 1.12
CHFR-218ENST00000540963 Q6ZTK2 550 aa22.02■■□□□ 1.12
CHFR-218ENST00000540963 PDZD9Q8IXQ8 264 aa22.02■■□□□ 1.12
CHFR-218ENST00000540963 FAM86B1Q8N7N1 296 aa22.02■■□□□ 1.12
CHFR-218ENST00000540963 C7orf34Q96L11 122 aa22.02■■□□□ 1.12
CHFR-218ENST00000540963 OPA3Q9H6K4 179 aa22.02■■□□□ 1.12
CHFR-218ENST00000540963 RNPEPL1Q9HAU8 725 aa22.02■■□□□ 1.12
CHFR-218ENST00000540963 A6NLC8 198 aa22.01■■□□□ 1.11
CHFR-218ENST00000540963 RNASEK-C17orf49H0YIS7 233 aa22.01■■□□□ 1.11
CHFR-218ENST00000540963 OTX1P32242 354 aaPredicted RBP22.01■■□□□ 1.11
CHFR-218ENST00000540963 Q6ZPA2 131 aa22.01■■□□□ 1.11
CHFR-218ENST00000540963 NMNAT3Q96T66 252 aa22.01■■□□□ 1.11
CHFR-218ENST00000540963 FAM32AQ9Y421 112 aaKnown RBP22.01■■□□□ 1.11
CHFR-218ENST00000540963 hCG_1807616A0A1W2PRN6 198 aa22■■□□□ 1.11
CHFR-218ENST00000540963 GSTA4O15217 222 aa22■■□□□ 1.11
CHFR-218ENST00000540963 PIN1P1O15428 100 aa22■■□□□ 1.11
CHFR-218ENST00000540963 GRPP07492 148 aa22■■□□□ 1.11
CHFR-218ENST00000540963 RHCEP18577 417 aa22■■□□□ 1.11
CHFR-218ENST00000540963 GRK5P34947 590 aa22■■□□□ 1.11
CHFR-218ENST00000540963 MICBQ29980 383 aa22■■□□□ 1.11
CHFR-218ENST00000540963 SNAI3Q3KNW1 292 aa22■■□□□ 1.11
CHFR-218ENST00000540963 FGD3Q5JSP0 725 aa22■■□□□ 1.11
CHFR-218ENST00000540963 SLC35E4Q6ICL7 350 aa22■■□□□ 1.11
CHFR-218ENST00000540963 DRAM2Q6UX65 266 aa22■■□□□ 1.11
CHFR-218ENST00000540963 ZNF826PQ6ZT77 177 aa22■■□□□ 1.11
CHFR-218ENST00000540963 SLC36A1Q7Z2H8 476 aa22■■□□□ 1.11
CHFR-218ENST00000540963 PPP1R14AQ96A00 147 aa22■■□□□ 1.11
CHFR-218ENST00000540963 NDUFAF4Q9P032 175 aa22■■□□□ 1.11
CHFR-218ENST00000540963 ONECUT1Q9UBC0 465 aa22■■□□□ 1.11
CHFR-218ENST00000540963 ANKRD61A6NGH8 418 aa21.99■■□□□ 1.11
CHFR-218ENST00000540963 BHLHE40O14503 412 aa21.99■■□□□ 1.11
CHFR-218ENST00000540963 NPFFO15130 113 aa21.99■■□□□ 1.11
CHFR-218ENST00000540963 SLC6A6P31641 620 aa21.99■■□□□ 1.11
CHFR-218ENST00000540963 C12orf43Q96C57 262 aaKnown RBP21.99■■□□□ 1.11
CHFR-218ENST00000540963 MAP6Q96JE9 813 aa21.99■■□□□ 1.11
CHFR-218ENST00000540963 KCTD14Q9BQ13 255 aaPredicted RBP21.99■■□□□ 1.11
CHFR-218ENST00000540963 FUZQ9BT04 418 aa21.99■■□□□ 1.11
CHFR-218ENST00000540963 RPRD1BQ9NQG5 326 aaKnown RBP21.99■■□□□ 1.11
CHFR-218ENST00000540963 PRPF19Q9UMS4 504 aaKnown RBP21.99■■□□□ 1.11
CHFR-218ENST00000540963 IDH3BO43837 385 aa21.98■■□□□ 1.11
CHFR-218ENST00000540963 HLA-DQA2P01906 255 aa21.98■■□□□ 1.11
CHFR-218ENST00000540963 HIST1H1CP16403 213 aaKnown RBP21.98■■□□□ 1.11
CHFR-218ENST00000540963 GABRA5P31644 462 aa21.98■■□□□ 1.11
CHFR-218ENST00000540963 DDOSTP39656 456 aa21.98■■□□□ 1.11
CHFR-218ENST00000540963 SEC23BQ15437 767 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms