RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 RAB1CQ92928 201 aa14.24□□□□□ -0.13
CD9-209ENST00000540891 DVL3Q92997 716 aaPredicted RBP14.24□□□□□ -0.13
CD9-209ENST00000540891 TIMD4Q96H15 378 aa14.24□□□□□ -0.13
CD9-209ENST00000540891 REEP6Q96HR9 211 aa14.24□□□□□ -0.13
CD9-209ENST00000540891 HRASLS5Q96KN8 279 aa14.24□□□□□ -0.13
CD9-209ENST00000540891 OR8B4Q96RC9 309 aa14.24□□□□□ -0.13
CD9-209ENST00000540891 MBOAT4Q96T53 435 aa14.24□□□□□ -0.13
CD9-209ENST00000540891 TTTY10Q9BZA0 68 aa14.24□□□□□ -0.13
CD9-209ENST00000540891 OPA3Q9H6K4 179 aa14.24□□□□□ -0.13
CD9-209ENST00000540891 ZNF665Q9H7R5 613 aa14.24□□□□□ -0.13
CD9-209ENST00000540891 MRPL15Q9P015 296 aaKnown RBP14.24□□□□□ -0.13
CD9-209ENST00000540891 H2AFY2Q9P0M6 372 aaPredicted RBP14.24□□□□□ -0.13
CD9-209ENST00000540891 PPP1R3CQ9UQK1 317 aa14.24□□□□□ -0.13
CD9-209ENST00000540891 NPTNQ9Y639 398 aa14.24□□□□□ -0.13
CD9-209ENST00000540891 DYSFO75923 2080 aa14.24□□□□□ -0.13
CD9-209ENST00000540891 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.23□□□□□ -0.13
CD9-209ENST00000540891 IGHV2-70P01814 119 aa14.23□□□□□ -0.13
CD9-209ENST00000540891 SBK2P0C263 348 aa14.23□□□□□ -0.13
CD9-209ENST00000540891 CD200P41217 278 aa14.23□□□□□ -0.13
CD9-209ENST00000540891 SRP9P49458 86 aaKnown RBP14.23□□□□□ -0.13
CD9-209ENST00000540891 TIGD6Q17RP2 521 aa14.23□□□□□ -0.13
CD9-209ENST00000540891 DEGS2Q6QHC5 323 aa14.23□□□□□ -0.13
CD9-209ENST00000540891 PRIMA1Q86XR5 153 aa14.23□□□□□ -0.13
CD9-209ENST00000540891 SLC35F2Q8IXU6 374 aa14.23□□□□□ -0.13
CD9-209ENST00000540891 EME1Q96AY2 570 aa14.23□□□□□ -0.13
CD9-209ENST00000540891 PGAM5Q96HS1 289 aa14.23□□□□□ -0.13
CD9-209ENST00000540891 OR10A2Q9H208 303 aa14.23□□□□□ -0.13
CD9-209ENST00000540891 NIPAL2Q9H841 368 aa14.23□□□□□ -0.13
CD9-209ENST00000540891 SP140LQ9H930 580 aa14.23□□□□□ -0.13
CD9-209ENST00000540891 KCNS2Q9ULS6 477 aa14.23□□□□□ -0.13
CD9-209ENST00000540891 TMEM14AQ9Y6G1 99 aa14.23□□□□□ -0.13
CD9-209ENST00000540891 TMEM178BH3BS89 294 aa14.22□□□□□ -0.13
CD9-209ENST00000540891 MAGEB4O15481 346 aaPredicted RBP14.22□□□□□ -0.13
CD9-209ENST00000540891 IGHV2-5P01817 119 aa14.22□□□□□ -0.13
CD9-209ENST00000540891 HTR1FP30939 366 aa14.22□□□□□ -0.13
CD9-209ENST00000540891 GATA4P43694 442 aa14.22□□□□□ -0.13
CD9-209ENST00000540891 PRAMEF6Q5VXH4 476 aa14.22□□□□□ -0.13
CD9-209ENST00000540891 KCTD18Q6PI47 426 aaPredicted RBP14.22□□□□□ -0.13
CD9-209ENST00000540891 MOGAT3Q86VF5 341 aa14.22□□□□□ -0.13
CD9-209ENST00000540891 ZNF679Q8IYX0 411 aa14.22□□□□□ -0.13
CD9-209ENST00000540891 CELF2-AS1Q8N7Q2 184 aa14.22□□□□□ -0.13
CD9-209ENST00000540891 OR8B12Q8NGG6 310 aa14.22□□□□□ -0.13
CD9-209ENST00000540891 OR51G2Q8NGK0 314 aa14.22□□□□□ -0.13
CD9-209ENST00000540891 FAM81AQ8TBF8 368 aa14.22□□□□□ -0.13
CD9-209ENST00000540891 ASB17Q8WXJ9 295 aa14.22□□□□□ -0.13
CD9-209ENST00000540891 LYZL4Q96KX0 146 aa14.22□□□□□ -0.13
CD9-209ENST00000540891 ADAT1Q9BUB4 502 aaKnown RBP14.22□□□□□ -0.13
CD9-209ENST00000540891 C9orf16Q9BUW7 83 aa14.22□□□□□ -0.13
CD9-209ENST00000540891 MROQ9BYG7 248 aa14.22□□□□□ -0.13
CD9-209ENST00000540891 SLC22A4Q9H015 551 aa14.22□□□□□ -0.13
CD9-209ENST00000540891 FAM206AQ9NX38 181 aa14.22□□□□□ -0.13
CD9-209ENST00000540891 WARS2Q9UGM6 360 aaKnown RBP14.22□□□□□ -0.13
CD9-209ENST00000540891 SVEP1Q4LDE5 3571 aa14.22□□□□□ -0.13
CD9-209ENST00000540891 B4DSR2 109 aa14.21□□□□□ -0.13
CD9-209ENST00000540891 SRSF10O75494 262 aaKnown RBP14.21□□□□□ -0.13
CD9-209ENST00000540891 PTBP3O95758 552 aaKnown RBP14.21□□□□□ -0.13
CD9-209ENST00000540891 CYB5R3P00387 301 aaPredicted RBP14.21□□□□□ -0.13
CD9-209ENST00000540891 DCTDP32321 178 aa14.21□□□□□ -0.13
CD9-209ENST00000540891 DDOSTP39656 456 aa14.21□□□□□ -0.13
CD9-209ENST00000540891 GSK3AP49840 483 aa14.21□□□□□ -0.13
CD9-209ENST00000540891 CDC42P60953 191 aa14.21□□□□□ -0.13
CD9-209ENST00000540891 CXCR4P61073 352 aa14.21□□□□□ -0.13
CD9-209ENST00000540891 ZMYND11Q15326 602 aa14.21□□□□□ -0.13
CD9-209ENST00000540891 OR8G1Q15617 311 aa14.21□□□□□ -0.13
CD9-209ENST00000540891 OR8B8Q15620 311 aa14.21□□□□□ -0.13
CD9-209ENST00000540891 MPPED2Q15777 294 aa14.21□□□□□ -0.13
CD9-209ENST00000540891 GFOD2Q3B7J2 385 aa14.21□□□□□ -0.13
CD9-209ENST00000540891 KRTAP21-3Q3LHN1 58 aa14.21□□□□□ -0.13
CD9-209ENST00000540891 ZNF322Q6U7Q0 402 aaPredicted RBP14.21□□□□□ -0.13
CD9-209ENST00000540891 SSX6Q7RTT6 188 aa14.21□□□□□ -0.13
CD9-209ENST00000540891 PEG10Q86TG7 708 aaKnown RBP14.21□□□□□ -0.13
CD9-209ENST00000540891 TRUB1Q8WWH5 349 aaKnown RBP14.21□□□□□ -0.13
CD9-209ENST00000540891 MNTQ99583 582 aa14.21□□□□□ -0.13
CD9-209ENST00000540891 GAL3ST1Q99999 423 aa14.21□□□□□ -0.13
CD9-209ENST00000540891 RGCCQ9H4X1 137 aa14.21□□□□□ -0.13
CD9-209ENST00000540891 PPP1R3EQ9H7J1 279 aa14.21□□□□□ -0.13
CD9-209ENST00000540891 LPAR2Q9HBW0 351 aa14.21□□□□□ -0.13
CD9-209ENST00000540891 CLN6Q9NWW5 311 aa14.21□□□□□ -0.13
CD9-209ENST00000540891 ORC6Q9Y5N6 252 aa14.21□□□□□ -0.13
CD9-209ENST00000540891 ISPDA4D126 451 aa14.2□□□□□ -0.14
CD9-209ENST00000540891 ANKRD65E5RJM6 399 aa14.2□□□□□ -0.14
CD9-209ENST00000540891 GMDSO60547 372 aa14.2□□□□□ -0.14
CD9-209ENST00000540891 ZNF254O75437 659 aa14.2□□□□□ -0.14
CD9-209ENST00000540891 APOL3O95236 402 aa14.2□□□□□ -0.14
CD9-209ENST00000540891 BAG2O95816 211 aa14.2□□□□□ -0.14
CD9-209ENST00000540891 MSMBP08118 114 aa14.2□□□□□ -0.14
CD9-209ENST00000540891 CFL1P23528 166 aaKnown RBP14.2□□□□□ -0.14
CD9-209ENST00000540891 ACKR3P25106 362 aa14.2□□□□□ -0.14
CD9-209ENST00000540891 DVL1P1P54792 670 aaPredicted RBP14.2□□□□□ -0.14
CD9-209ENST00000540891 BTG1P62324 171 aa14.2□□□□□ -0.14
CD9-209ENST00000540891 MFGE8Q08431 387 aaPredicted RBP14.2□□□□□ -0.14
CD9-209ENST00000540891 ZNF181Q2M3W8 571 aa14.2□□□□□ -0.14
CD9-209ENST00000540891 CHRFAM7AQ494W8 412 aa14.2□□□□□ -0.14
CD9-209ENST00000540891 ZBTB49Q6ZSB9 765 aa14.2□□□□□ -0.14
CD9-209ENST00000540891 IL17RELQ6ZVW7 336 aa14.2□□□□□ -0.14
CD9-209ENST00000540891 ZNF771Q7L3S4 317 aaPredicted RBP14.2□□□□□ -0.14
CD9-209ENST00000540891 LRRC28Q86X40 367 aaPredicted RBP14.2□□□□□ -0.14
CD9-209ENST00000540891 APOL4Q9BPW4 351 aa14.2□□□□□ -0.14
CD9-209ENST00000540891 MRM2Q9UI43 246 aaKnown RBP14.2□□□□□ -0.14
CD9-209ENST00000540891 CDC42EP3Q9UKI2 254 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms