RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 TMEM163Q8TC26 289 aa12.68□□□□□ -0.38
UBE3B-212ENST00000540230 REEP6Q96HR9 211 aa12.68□□□□□ -0.38
UBE3B-212ENST00000540230 BEX2Q9BXY8 128 aa12.68□□□□□ -0.38
UBE3B-212ENST00000540230 PPP1R3EQ9H7J1 279 aa12.68□□□□□ -0.38
UBE3B-212ENST00000540230 LAMP5Q9UJQ1 280 aa12.68□□□□□ -0.38
UBE3B-212ENST00000540230 LRP12Q9Y561 859 aa12.68□□□□□ -0.38
UBE3B-212ENST00000540230 EI24O14681 340 aa12.67□□□□□ -0.38
UBE3B-212ENST00000540230 XRCC2O43543 280 aa12.67□□□□□ -0.38
UBE3B-212ENST00000540230 SBK2P0C263 348 aa12.67□□□□□ -0.38
UBE3B-212ENST00000540230 FAM157CP0CG43 387 aa12.67□□□□□ -0.38
UBE3B-212ENST00000540230 SRP9P49458 86 aaKnown RBP12.67□□□□□ -0.38
UBE3B-212ENST00000540230 RAD23AP54725 363 aa12.67□□□□□ -0.38
UBE3B-212ENST00000540230 MPPED2Q15777 294 aa12.67□□□□□ -0.38
UBE3B-212ENST00000540230 GFOD2Q3B7J2 385 aa12.67□□□□□ -0.38
UBE3B-212ENST00000540230 FAM201AQ5SY85 155 aa12.67□□□□□ -0.38
UBE3B-212ENST00000540230 MEPCEQ7L2J0 689 aaKnown RBP12.67□□□□□ -0.38
UBE3B-212ENST00000540230 TMEM186Q96B77 213 aa12.67□□□□□ -0.38
UBE3B-212ENST00000540230 ADAT1Q9BUB4 502 aaKnown RBP12.67□□□□□ -0.38
UBE3B-212ENST00000540230 PRRG3Q9BZD7 231 aa12.67□□□□□ -0.38
UBE3B-212ENST00000540230 HIF1ANQ9NWT6 349 aa12.67□□□□□ -0.38
UBE3B-212ENST00000540230 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.67□□□□□ -0.38
UBE3B-212ENST00000540230 FBN1P35555 2871 aaKnown RBP12.67□□□□□ -0.38
UBE3B-212ENST00000540230 hCG_38984A0A1B0GV85 526 aa12.67□□□□□ -0.38
UBE3B-212ENST00000540230 ALPLP05186 524 aa12.67□□□□□ -0.38
UBE3B-212ENST00000540230 CD200P41217 278 aa12.67□□□□□ -0.38
UBE3B-212ENST00000540230 SEC61A1P61619 476 aaKnown RBP12.67□□□□□ -0.38
UBE3B-212ENST00000540230 BTG1P62324 171 aa12.67□□□□□ -0.38
UBE3B-212ENST00000540230 OR8G1Q15617 311 aa12.67□□□□□ -0.38
UBE3B-212ENST00000540230 TIGD6Q17RP2 521 aa12.67□□□□□ -0.38
UBE3B-212ENST00000540230 LCN1P1Q5VSP4 162 aa12.67□□□□□ -0.38
UBE3B-212ENST00000540230 NXNL2Q5VZ03 156 aa12.67□□□□□ -0.38
UBE3B-212ENST00000540230 ZFP1Q6P2D0 407 aa12.67□□□□□ -0.38
UBE3B-212ENST00000540230 PEG10Q86TG7 708 aaKnown RBP12.67□□□□□ -0.38
UBE3B-212ENST00000540230 GLCCI1Q86VQ1 547 aa12.67□□□□□ -0.38
UBE3B-212ENST00000540230 RAB39BQ96DA2 213 aa12.67□□□□□ -0.38
UBE3B-212ENST00000540230 PGAM5Q96HS1 289 aa12.67□□□□□ -0.38
UBE3B-212ENST00000540230 RBM4BQ9BQ04 359 aaKnown RBP12.67□□□□□ -0.38
UBE3B-212ENST00000540230 YIPF3Q9GZM5 350 aa12.67□□□□□ -0.38
UBE3B-212ENST00000540230 ADGRL4Q9HBW9 690 aa12.67□□□□□ -0.38
UBE3B-212ENST00000540230 UFSP2Q9NUQ7 469 aa12.67□□□□□ -0.38
UBE3B-212ENST00000540230 LPAR3Q9UBY5 353 aa12.67□□□□□ -0.38
UBE3B-212ENST00000540230 MXRA5Q9NR99 2828 aa12.66□□□□□ -0.38
UBE3B-212ENST00000540230 MAGEB4O15481 346 aaPredicted RBP12.66□□□□□ -0.38
UBE3B-212ENST00000540230 PLPP2O43688 288 aa12.66□□□□□ -0.38
UBE3B-212ENST00000540230 GATA4P43694 442 aa12.66□□□□□ -0.38
UBE3B-212ENST00000540230 PSMA6P60900 246 aaKnown RBP12.66□□□□□ -0.38
UBE3B-212ENST00000540230 KRT77Q7Z794 578 aa12.66□□□□□ -0.38
UBE3B-212ENST00000540230 LRRC28Q86X40 367 aaPredicted RBP12.66□□□□□ -0.38
UBE3B-212ENST00000540230 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.66□□□□□ -0.38
UBE3B-212ENST00000540230 OR8B12Q8NGG6 310 aa12.66□□□□□ -0.38
UBE3B-212ENST00000540230 OR51F2Q8NH61 342 aa12.66□□□□□ -0.38
UBE3B-212ENST00000540230 UBE2FQ969M7 185 aa12.66□□□□□ -0.38
UBE3B-212ENST00000540230 LYZL4Q96KX0 146 aa12.66□□□□□ -0.38
UBE3B-212ENST00000540230 CNN2Q99439 309 aaKnown RBP12.66□□□□□ -0.38
UBE3B-212ENST00000540230 OPA3Q9H6K4 179 aa12.66□□□□□ -0.38
UBE3B-212ENST00000540230 G6PC2Q9NQR9 355 aa12.66□□□□□ -0.38
UBE3B-212ENST00000540230 MRPL15Q9P015 296 aaKnown RBP12.66□□□□□ -0.38
UBE3B-212ENST00000540230 ENOPH1Q9UHY7 261 aa12.66□□□□□ -0.38
UBE3B-212ENST00000540230 WNK2Q9Y3S1 2297 aa12.66□□□□□ -0.38
UBE3B-212ENST00000540230 FAM20BO75063 409 aa12.65□□□□□ -0.38
UBE3B-212ENST00000540230 APOC1P02654 83 aa12.65□□□□□ -0.38
UBE3B-212ENST00000540230 C19orf18Q8NEA5 215 aa12.65□□□□□ -0.38
UBE3B-212ENST00000540230 OR52H1Q8NGJ2 320 aa12.65□□□□□ -0.38
UBE3B-212ENST00000540230 OR10A2Q9H208 303 aa12.65□□□□□ -0.38
UBE3B-212ENST00000540230 S100A14Q9HCY8 104 aa12.65□□□□□ -0.38
UBE3B-212ENST00000540230 FAM206AQ9NX38 181 aa12.65□□□□□ -0.38
UBE3B-212ENST00000540230 USE1Q9NZ43 259 aa12.65□□□□□ -0.38
UBE3B-212ENST00000540230 SLC22A31A6NKX4 558 aa12.64□□□□□ -0.39
UBE3B-212ENST00000540230 E9PQ18 207 aa12.64□□□□□ -0.39
UBE3B-212ENST00000540230 APOL3O95236 402 aa12.64□□□□□ -0.39
UBE3B-212ENST00000540230 PTBP3O95758 552 aaKnown RBP12.64□□□□□ -0.39
UBE3B-212ENST00000540230 AVPP01185 164 aa12.64□□□□□ -0.39
UBE3B-212ENST00000540230 SRD5A1P18405 259 aa12.64□□□□□ -0.39
UBE3B-212ENST00000540230 ACKR3P25106 362 aa12.64□□□□□ -0.39
UBE3B-212ENST00000540230 ZFP36P26651 326 aaKnown RBP12.64□□□□□ -0.39
UBE3B-212ENST00000540230 GSK3AP49840 483 aa12.64□□□□□ -0.39
UBE3B-212ENST00000540230 CXCR4P61073 352 aa12.64□□□□□ -0.39
UBE3B-212ENST00000540230 LCN2P80188 198 aa12.64□□□□□ -0.39
UBE3B-212ENST00000540230 ZNF181Q2M3W8 571 aa12.64□□□□□ -0.39
UBE3B-212ENST00000540230 ZIK1Q3SY52 487 aaPredicted RBP12.64□□□□□ -0.39
UBE3B-212ENST00000540230 TMEM155Q4W5P6 130 aa12.64□□□□□ -0.39
UBE3B-212ENST00000540230 C1orf229Q6ZS94 237 aaPredicted RBP12.64□□□□□ -0.39
UBE3B-212ENST00000540230 SSX6Q7RTT6 188 aa12.64□□□□□ -0.39
UBE3B-212ENST00000540230 WDR86Q86TI4 376 aa12.64□□□□□ -0.39
UBE3B-212ENST00000540230 SLC35F2Q8IXU6 374 aa12.64□□□□□ -0.39
UBE3B-212ENST00000540230 CBR4Q8N4T8 237 aa12.64□□□□□ -0.39
UBE3B-212ENST00000540230 CELF2-AS1Q8N7Q2 184 aa12.64□□□□□ -0.39
UBE3B-212ENST00000540230 OR51G2Q8NGK0 314 aa12.64□□□□□ -0.39
UBE3B-212ENST00000540230 PPP1R14AQ96A00 147 aa12.64□□□□□ -0.39
UBE3B-212ENST00000540230 OR8B4Q96RC9 309 aa12.64□□□□□ -0.39
UBE3B-212ENST00000540230 MDFIQ99750 246 aa12.64□□□□□ -0.39
UBE3B-212ENST00000540230 SLC22A4Q9H015 551 aa12.64□□□□□ -0.39
UBE3B-212ENST00000540230 PATZ1Q9HBE1 687 aaKnown RBP12.64□□□□□ -0.39
UBE3B-212ENST00000540230 TMEM165Q9HC07 324 aa12.64□□□□□ -0.39
UBE3B-212ENST00000540230 H2AFY2Q9P0M6 372 aaPredicted RBP12.64□□□□□ -0.39
UBE3B-212ENST00000540230 ATRQ13535 2644 aa12.63□□□□□ -0.39
UBE3B-212ENST00000540230 CEACAM18A8MTB9 384 aa12.63□□□□□ -0.39
UBE3B-212ENST00000540230 F5H0A9 414 aaPredicted RBP12.63□□□□□ -0.39
UBE3B-212ENST00000540230 GMDSO60547 372 aa12.63□□□□□ -0.39
UBE3B-212ENST00000540230 PNPP00491 289 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms