RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 INTS14Q96SY0 518 aa12.92□□□□□ -0.34
CPSF1-211ENST00000533492 TOR3AQ9H497 397 aa12.92□□□□□ -0.34
CPSF1-211ENST00000533492 OPA3Q9H6K4 179 aa12.92□□□□□ -0.34
CPSF1-211ENST00000533492 SP140LQ9H930 580 aa12.92□□□□□ -0.34
CPSF1-211ENST00000533492 MED20Q9H944 212 aa12.92□□□□□ -0.34
CPSF1-211ENST00000533492 MRPL15Q9P015 296 aaKnown RBP12.92□□□□□ -0.34
CPSF1-211ENST00000533492 RNF7Q9UBF6 113 aa12.92□□□□□ -0.34
CPSF1-211ENST00000533492 CLN8Q9UBY8 286 aa12.92□□□□□ -0.34
CPSF1-211ENST00000533492 ZNF69Q9UC07 566 aa12.92□□□□□ -0.34
CPSF1-211ENST00000533492 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.91□□□□□ -0.34
CPSF1-211ENST00000533492 DHRS12A0PJE2 317 aa12.91□□□□□ -0.34
CPSF1-211ENST00000533492 TMEM89A2RUT3 159 aa12.91□□□□□ -0.34
CPSF1-211ENST00000533492 FAM183AA6NL82 134 aa12.91□□□□□ -0.34
CPSF1-211ENST00000533492 AQP12BA6NM10 295 aa12.91□□□□□ -0.34
CPSF1-211ENST00000533492 ACOT8O14734 319 aa12.91□□□□□ -0.34
CPSF1-211ENST00000533492 APOC1P02654 83 aa12.91□□□□□ -0.34
CPSF1-211ENST00000533492 ANXA2P07355 339 aaKnown RBP12.91□□□□□ -0.34
CPSF1-211ENST00000533492 GRPP07492 148 aa12.91□□□□□ -0.34
CPSF1-211ENST00000533492 PAICSP22234 425 aaKnown RBP12.91□□□□□ -0.34
CPSF1-211ENST00000533492 GSTT1P30711 240 aa12.91□□□□□ -0.34
CPSF1-211ENST00000533492 GRK5P34947 590 aa12.91□□□□□ -0.34
CPSF1-211ENST00000533492 CX3CR1P49238 355 aa12.91□□□□□ -0.34
CPSF1-211ENST00000533492 KCNJ8Q15842 424 aa12.91□□□□□ -0.34
CPSF1-211ENST00000533492 TIGD6Q17RP2 521 aa12.91□□□□□ -0.34
CPSF1-211ENST00000533492 DCDC5Q6ZRR9 648 aa12.91□□□□□ -0.34
CPSF1-211ENST00000533492 SHFQ7M4L6 423 aa12.91□□□□□ -0.34
CPSF1-211ENST00000533492 DPY19L4Q7Z388 723 aa12.91□□□□□ -0.34
CPSF1-211ENST00000533492 AQP12AQ8IXF9 295 aa12.91□□□□□ -0.34
CPSF1-211ENST00000533492 ADGRG5Q8IZF4 528 aa12.91□□□□□ -0.34
CPSF1-211ENST00000533492 IQCF1Q8N6M8 205 aa12.91□□□□□ -0.34
CPSF1-211ENST00000533492 SIGLECL1Q8N7X8 197 aa12.91□□□□□ -0.34
CPSF1-211ENST00000533492 C3orf56Q8N813 242 aa12.91□□□□□ -0.34
CPSF1-211ENST00000533492 ZDHHC22Q8N966 263 aa12.91□□□□□ -0.34
CPSF1-211ENST00000533492 BOLLQ8N9W6 283 aaKnown RBP12.91□□□□□ -0.34
CPSF1-211ENST00000533492 PLPP7Q8NBV4 271 aa12.91□□□□□ -0.34
CPSF1-211ENST00000533492 C19orf18Q8NEA5 215 aa12.91□□□□□ -0.34
CPSF1-211ENST00000533492 OR56B2PQ8NGI1 322 aa12.91□□□□□ -0.34
CPSF1-211ENST00000533492 CANT1Q8WVQ1 401 aa12.91□□□□□ -0.34
CPSF1-211ENST00000533492 MS4A7Q9GZW8 240 aaPredicted RBP12.91□□□□□ -0.34
CPSF1-211ENST00000533492 OR51V1Q9H2C8 321 aa12.91□□□□□ -0.34
CPSF1-211ENST00000533492 ZNF556Q9HAH1 456 aa12.91□□□□□ -0.34
CPSF1-211ENST00000533492 ESM1Q9NQ30 184 aa12.91□□□□□ -0.34
CPSF1-211ENST00000533492 PDP1Q9P0J1 537 aaPredicted RBP12.91□□□□□ -0.34
CPSF1-211ENST00000533492 IGHV2-70DA0A0C4DH43 119 aa12.9□□□□□ -0.34
CPSF1-211ENST00000533492 C5orf63A6NC05 138 aa12.9□□□□□ -0.34
CPSF1-211ENST00000533492 ARRDC5A6NEK1 342 aa12.9□□□□□ -0.34
CPSF1-211ENST00000533492 A6NLC8 198 aa12.9□□□□□ -0.34
CPSF1-211ENST00000533492 ANKRD30BLA7E2S9 258 aa12.9□□□□□ -0.34
CPSF1-211ENST00000533492 E2F6O75461 281 aa12.9□□□□□ -0.34
CPSF1-211ENST00000533492 GLCEO94923 617 aa12.9□□□□□ -0.34
CPSF1-211ENST00000533492 HOXB6P17509 224 aaKnown RBP12.9□□□□□ -0.34
CPSF1-211ENST00000533492 CFPP27918 469 aa12.9□□□□□ -0.34
CPSF1-211ENST00000533492 DDOSTP39656 456 aa12.9□□□□□ -0.34
CPSF1-211ENST00000533492 GINS1Q14691 196 aa12.9□□□□□ -0.34
CPSF1-211ENST00000533492 OR8B8Q15620 311 aa12.9□□□□□ -0.34
CPSF1-211ENST00000533492 KLF17Q5JT82 389 aaPredicted RBP12.9□□□□□ -0.34
CPSF1-211ENST00000533492 LINC01590Q5TEZ4 76 aa12.9□□□□□ -0.34
CPSF1-211ENST00000533492 SFRP4Q6FHJ7 346 aaPredicted RBP12.9□□□□□ -0.34
CPSF1-211ENST00000533492 LYPD2Q6UXB3 125 aa12.9□□□□□ -0.34
CPSF1-211ENST00000533492 SPATA24Q86W54 205 aa12.9□□□□□ -0.34
CPSF1-211ENST00000533492 NUDT16L1Q9BRJ7 211 aaKnown RBP12.9□□□□□ -0.34
CPSF1-211ENST00000533492 ABHD6Q9BV23 337 aa12.9□□□□□ -0.34
CPSF1-211ENST00000533492 MMADHCQ9H3L0 296 aaPredicted RBP12.9□□□□□ -0.34
CPSF1-211ENST00000533492 C14orf119Q9NWQ9 140 aa12.9□□□□□ -0.34
CPSF1-211ENST00000533492 ERVK-18Q9QC07 812 aa12.9□□□□□ -0.34
CPSF1-211ENST00000533492 KIR2DS1A0A191URI9 304 aa12.89□□□□□ -0.35
CPSF1-211ENST00000533492 PRR23D1E9PI22 279 aaPredicted RBP12.89□□□□□ -0.35
CPSF1-211ENST00000533492 LGALS8O00214 317 aa12.89□□□□□ -0.35
CPSF1-211ENST00000533492 DYNC1I1O14576 645 aa12.89□□□□□ -0.35
CPSF1-211ENST00000533492 PHYHO14832 338 aa12.89□□□□□ -0.35
CPSF1-211ENST00000533492 GYG2O15488 501 aa12.89□□□□□ -0.35
CPSF1-211ENST00000533492 HMGN1P05114 100 aa12.89□□□□□ -0.35
CPSF1-211ENST00000533492 PRR23D2P0DMB1 279 aaPredicted RBP12.89□□□□□ -0.35
CPSF1-211ENST00000533492 PPIAL4GP0DN37 164 aa12.89□□□□□ -0.35
CPSF1-211ENST00000533492 ANOS1P23352 680 aa12.89□□□□□ -0.35
CPSF1-211ENST00000533492 COMPP49747 757 aaPredicted RBP12.89□□□□□ -0.35
CPSF1-211ENST00000533492 UBA52P62987 128 aaKnown RBP12.89□□□□□ -0.35
CPSF1-211ENST00000533492 PAX2Q02962 417 aa12.89□□□□□ -0.35
CPSF1-211ENST00000533492 DNAL1Q4LDG9 190 aa12.89□□□□□ -0.35
CPSF1-211ENST00000533492 WDR25Q64LD2 544 aaPredicted RBP12.89□□□□□ -0.35
CPSF1-211ENST00000533492 DOK3Q7L591 496 aa12.89□□□□□ -0.35
CPSF1-211ENST00000533492 TRPM8Q7Z2W7 1104 aa12.89□□□□□ -0.35
CPSF1-211ENST00000533492 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.89□□□□□ -0.35
CPSF1-211ENST00000533492 BCL6BQ8N143 479 aaPredicted RBP12.89□□□□□ -0.35
CPSF1-211ENST00000533492 OR8S1Q8NH09 359 aa12.89□□□□□ -0.35
CPSF1-211ENST00000533492 YY1AP1Q9H869 796 aa12.89□□□□□ -0.35
CPSF1-211ENST00000533492 BRD7Q9NPI1 651 aa12.89□□□□□ -0.35
CPSF1-211ENST00000533492 TRIM36Q9NQ86 728 aa12.89□□□□□ -0.35
CPSF1-211ENST00000533492 C1orf123Q9NWV4 160 aa12.89□□□□□ -0.35
CPSF1-211ENST00000533492 DNAJC27Q9NZQ0 273 aa12.89□□□□□ -0.35
CPSF1-211ENST00000533492 IGHV3OR16-10A0A075B7F0 116 aa12.88□□□□□ -0.35
CPSF1-211ENST00000533492 TRAV38-1A0A0B4J264 116 aa12.88□□□□□ -0.35
CPSF1-211ENST00000533492 hCG_1807616A0A1W2PRN6 198 aa12.88□□□□□ -0.35
CPSF1-211ENST00000533492 C3orf80F5H4A9 247 aa12.88□□□□□ -0.35
CPSF1-211ENST00000533492 NDUFA2O43678 99 aa12.88□□□□□ -0.35
CPSF1-211ENST00000533492 PTBP3O95758 552 aaKnown RBP12.88□□□□□ -0.35
CPSF1-211ENST00000533492 H2BFMP0C1H6 154 aa12.88□□□□□ -0.35
CPSF1-211ENST00000533492 CFL1P23528 166 aaKnown RBP12.88□□□□□ -0.35
CPSF1-211ENST00000533492 MTNR1AP48039 350 aa12.88□□□□□ -0.35
CPSF1-211ENST00000533492 NPY4RP50391 375 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms