RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 RFC3P40938 356 aa13.72□□□□□ -0.21
PCDHA3-202ENST00000532566 ACAA2P42765 397 aaKnown RBP13.72□□□□□ -0.21
PCDHA3-202ENST00000532566 RPP30P78346 268 aaKnown RBP13.72□□□□□ -0.21
PCDHA3-202ENST00000532566 DMRTC1Q5HYR2 192 aa13.72□□□□□ -0.21
PCDHA3-202ENST00000532566 SLC22A25Q6T423 547 aa13.72□□□□□ -0.21
PCDHA3-202ENST00000532566 LYG2Q86SG7 212 aa13.72□□□□□ -0.21
PCDHA3-202ENST00000532566 OR14K1Q8NGZ2 314 aa13.72□□□□□ -0.21
PCDHA3-202ENST00000532566 YIPF5Q969M3 257 aa13.72□□□□□ -0.21
PCDHA3-202ENST00000532566 LANCL2Q9NS86 450 aa13.72□□□□□ -0.21
PCDHA3-202ENST00000532566 TRIM64A6NGJ6 449 aa13.72□□□□□ -0.21
PCDHA3-202ENST00000532566 ST8SIA3O43173 380 aa13.72□□□□□ -0.21
PCDHA3-202ENST00000532566 GLI4P10075 376 aa13.72□□□□□ -0.21
PCDHA3-202ENST00000532566 ZNF266Q14584 549 aa13.72□□□□□ -0.21
PCDHA3-202ENST00000532566 WDR74Q6RFH5 385 aaPredicted RBP13.72□□□□□ -0.21
PCDHA3-202ENST00000532566 FAM213BQ8TBF2 198 aa13.72□□□□□ -0.21
PCDHA3-202ENST00000532566 PRSS27Q9BQR3 290 aa13.72□□□□□ -0.21
PCDHA3-202ENST00000532566 TINAGL1Q9GZM7 467 aaPredicted RBP13.72□□□□□ -0.21
PCDHA3-202ENST00000532566 DSPPQ9NZW4 1301 aa13.72□□□□□ -0.21
PCDHA3-202ENST00000532566 TCRBV16S1A1N1A0A5B0 115 aa13.72□□□□□ -0.21
PCDHA3-202ENST00000532566 SNRNP70P08621 437 aaKnown RBP13.72□□□□□ -0.21
PCDHA3-202ENST00000532566 SLC6A1P30531 599 aa13.72□□□□□ -0.21
PCDHA3-202ENST00000532566 VHLLQ6RSH7 139 aa13.72□□□□□ -0.21
PCDHA3-202ENST00000532566 TMEM91Q6ZNR0 172 aa13.72□□□□□ -0.21
PCDHA3-202ENST00000532566 ZNF321PQ8N8H1 164 aa13.72□□□□□ -0.21
PCDHA3-202ENST00000532566 SUMF1Q8NBK3 374 aa13.72□□□□□ -0.21
PCDHA3-202ENST00000532566 ASB13Q8WXK3 278 aa13.72□□□□□ -0.21
PCDHA3-202ENST00000532566 MARC2Q969Z3 335 aa13.72□□□□□ -0.21
PCDHA3-202ENST00000532566 UQCC2Q9BRT2 126 aa13.72□□□□□ -0.21
PCDHA3-202ENST00000532566 DEFB127Q9H1M4 99 aa13.72□□□□□ -0.21
PCDHA3-202ENST00000532566 SDHAF2Q9NX18 166 aa13.72□□□□□ -0.21
PCDHA3-202ENST00000532566 CLEC1BQ9P126 229 aa13.72□□□□□ -0.21
PCDHA3-202ENST00000532566 DUSP13Q9UII6 198 aa13.72□□□□□ -0.21
PCDHA3-202ENST00000532566 RER1O15258 196 aa13.71□□□□□ -0.21
PCDHA3-202ENST00000532566 CTXN2P0C2S0 81 aa13.71□□□□□ -0.21
PCDHA3-202ENST00000532566 OR5H8P0DN80 308 aa13.71□□□□□ -0.21
PCDHA3-202ENST00000532566 ARR3P36575 388 aa13.71□□□□□ -0.21
PCDHA3-202ENST00000532566 IFITM3Q01628 133 aa13.71□□□□□ -0.21
PCDHA3-202ENST00000532566 CLINT1Q14677 625 aa13.71□□□□□ -0.21
PCDHA3-202ENST00000532566 ARRDC1Q8N5I2 433 aa13.71□□□□□ -0.21
PCDHA3-202ENST00000532566 OR5T1Q8NG75 326 aa13.71□□□□□ -0.21
PCDHA3-202ENST00000532566 SLCO1B1Q9Y6L6 691 aa13.71□□□□□ -0.21
PCDHA3-202ENST00000532566 C5orf49A4QMS7 147 aa13.71□□□□□ -0.21
PCDHA3-202ENST00000532566 CTAG2O75638 210 aa13.71□□□□□ -0.21
PCDHA3-202ENST00000532566 IFNA17P01571 189 aa13.71□□□□□ -0.21
PCDHA3-202ENST00000532566 SNTB1Q13884 538 aaKnown RBP13.71□□□□□ -0.21
PCDHA3-202ENST00000532566 PNLIPRP3Q17RR3 467 aa13.71□□□□□ -0.21
PCDHA3-202ENST00000532566 OR4S1Q8NGB4 309 aa13.71□□□□□ -0.21
PCDHA3-202ENST00000532566 OR51A4Q8NGJ6 313 aa13.71□□□□□ -0.21
PCDHA3-202ENST00000532566 AKR7LQ8NHP1 331 aa13.71□□□□□ -0.21
PCDHA3-202ENST00000532566 FOXB1Q99853 325 aa13.71□□□□□ -0.21
PCDHA3-202ENST00000532566 SH3BGRL2Q9UJC5 107 aa13.71□□□□□ -0.21
PCDHA3-202ENST00000532566 SERPINE3A8MV23 424 aa13.71□□□□□ -0.21
PCDHA3-202ENST00000532566 DEGS1O15121 323 aa13.71□□□□□ -0.21
PCDHA3-202ENST00000532566 MT-CO2P00403 227 aa13.71□□□□□ -0.21
PCDHA3-202ENST00000532566 LTC4SQ16873 150 aa13.71□□□□□ -0.21
PCDHA3-202ENST00000532566 TERB2Q8NHR7 220 aa13.71□□□□□ -0.21
PCDHA3-202ENST00000532566 WFDC6Q9BQY6 131 aa13.71□□□□□ -0.21
PCDHA3-202ENST00000532566 PIGMQ9H3S5 423 aa13.71□□□□□ -0.21
PCDHA3-202ENST00000532566 PLEKHA3Q9HB20 300 aa13.71□□□□□ -0.21
PCDHA3-202ENST00000532566 LSM2Q9Y333 95 aaKnown RBP13.71□□□□□ -0.21
PCDHA3-202ENST00000532566 TPOP07202 933 aa13.71□□□□□ -0.22
PCDHA3-202ENST00000532566 INHBBP09529 407 aa13.71□□□□□ -0.22
PCDHA3-202ENST00000532566 PPIAP62937 165 aaKnown RBP13.71□□□□□ -0.22
PCDHA3-202ENST00000532566 ZNF79Q15937 498 aa13.71□□□□□ -0.22
PCDHA3-202ENST00000532566 ST3GAL2Q16842 350 aa13.71□□□□□ -0.22
PCDHA3-202ENST00000532566 LAIR2Q6ISS4 152 aa13.71□□□□□ -0.22
PCDHA3-202ENST00000532566 WDR89Q96FK6 387 aaPredicted RBP13.71□□□□□ -0.22
PCDHA3-202ENST00000532566 TAAR9Q96RI9 348 aa13.71□□□□□ -0.22
PCDHA3-202ENST00000532566 RTL8AQ9BWD3 113 aa13.71□□□□□ -0.22
PCDHA3-202ENST00000532566 GREB1Q4ZG55 1949 aa13.71□□□□□ -0.22
PCDHA3-202ENST00000532566 PTP4A3O75365 173 aa13.7□□□□□ -0.22
PCDHA3-202ENST00000532566 IL9P15248 144 aa13.7□□□□□ -0.22
PCDHA3-202ENST00000532566 PRKACAP17612 351 aa13.7□□□□□ -0.22
PCDHA3-202ENST00000532566 HBG1P69891 147 aa13.7□□□□□ -0.22
PCDHA3-202ENST00000532566 HBG2P69892 147 aa13.7□□□□□ -0.22
PCDHA3-202ENST00000532566 ETFDHQ16134 617 aa13.7□□□□□ -0.22
PCDHA3-202ENST00000532566 WIPI1Q5MNZ9 446 aaPredicted RBP13.7□□□□□ -0.22
PCDHA3-202ENST00000532566 SLC22A18ASQ8N1D0 253 aa13.7□□□□□ -0.22
PCDHA3-202ENST00000532566 OR56B2PQ8NGI1 322 aa13.7□□□□□ -0.22
PCDHA3-202ENST00000532566 GRPP07492 148 aa13.7□□□□□ -0.22
PCDHA3-202ENST00000532566 BAMBIQ13145 260 aa13.7□□□□□ -0.22
PCDHA3-202ENST00000532566 SLC25A26Q70HW3 274 aa13.7□□□□□ -0.22
PCDHA3-202ENST00000532566 PRSS42Q7Z5A4 293 aa13.7□□□□□ -0.22
PCDHA3-202ENST00000532566 FLVCR1Q9Y5Y0 555 aa13.7□□□□□ -0.22
PCDHA3-202ENST00000532566 SIP14410 1827 aa13.7□□□□□ -0.22
PCDHA3-202ENST00000532566 TMEM272A0A1B0GTI8 110 aa13.7□□□□□ -0.22
PCDHA3-202ENST00000532566 FAM221AA4D161 298 aa13.7□□□□□ -0.22
PCDHA3-202ENST00000532566 C4orf51C9J302 202 aa13.7□□□□□ -0.22
PCDHA3-202ENST00000532566 ICMTO60725 284 aa13.7□□□□□ -0.22
PCDHA3-202ENST00000532566 TNFSF15O95150 251 aa13.7□□□□□ -0.22
PCDHA3-202ENST00000532566 MPZL1O95297 269 aa13.7□□□□□ -0.22
PCDHA3-202ENST00000532566 MSL3P1P0C860 447 aa13.7□□□□□ -0.22
PCDHA3-202ENST00000532566 IDH3GP51553 393 aaPredicted RBP13.7□□□□□ -0.22
PCDHA3-202ENST00000532566 DBPQ10586 325 aaPredicted RBP13.7□□□□□ -0.22
PCDHA3-202ENST00000532566 COL13A1Q5TAT6 717 aaPredicted RBP13.7□□□□□ -0.22
PCDHA3-202ENST00000532566 CDC20BQ86Y33 519 aa13.7□□□□□ -0.22
PCDHA3-202ENST00000532566 OR5AS1Q8N127 324 aa13.7□□□□□ -0.22
PCDHA3-202ENST00000532566 PPP1R1CQ8WVI7 109 aa13.7□□□□□ -0.22
PCDHA3-202ENST00000532566 MCHR2Q969V1 340 aa13.7□□□□□ -0.22
PCDHA3-202ENST00000532566 RBMXL1Q96E39 390 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms