RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 RWDD4Q6NW29 188 aaKnown RBP3.74□□□□□ -1.81
CD44-213ENST00000525209 TRIM40Q6P9F5 258 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 TMEM207Q6UWW9 146 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 SMIM5Q71RC9 77 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 FAM19A5Q7Z5A7 132 aaPredicted RBP3.74□□□□□ -1.81
CD44-213ENST00000525209 TMEM144Q7Z5S9 345 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 PIANPQ8IYJ0 282 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 CPNE9Q8IYJ1 553 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 OR10W1Q8NGF6 305 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 OR2G2Q8NGZ5 317 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 OR2T11Q8NH01 316 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 C11orf45Q8TAV5 145 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 HAVCR2Q8TDQ0 301 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 EVPLQ92817 2033 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 RERGQ96A58 199 aaPredicted RBP3.74□□□□□ -1.81
CD44-213ENST00000525209 DYNLL2Q96FJ2 89 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 SEC22AQ96IW7 307 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 FAM210BQ96KR6 192 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 ZNF599Q96NL3 588 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 ZNF385AQ96PM9 386 aaKnown RBP3.74□□□□□ -1.81
CD44-213ENST00000525209 RBP7Q96R05 134 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 FAM173AQ9BQD7 235 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 HES7Q9BYE0 225 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 KRTAP9-3Q9BYQ3 159 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 SIAEQ9HAT2 523 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 NMUR1Q9HB89 426 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 TRPM3Q9HCF6 1732 aaPredicted RBP3.74□□□□□ -1.81
CD44-213ENST00000525209 MEPEQ9NQ76 525 aaPredicted RBP3.74□□□□□ -1.81
CD44-213ENST00000525209 EHFQ9NZC4 300 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 PPP4R1LQ9P1A2 415 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 GNPTGQ9UJJ9 305 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 KIAA1210Q9ULL0 1709 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 ING4Q9UNL4 249 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 NTNG1Q9Y2I2 539 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 GOLT1BQ9Y3E0 138 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 L3MBTL1Q9Y468 752 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 SELENOKQ9Y6D0 94 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 N4BP2Q86UW6 1770 aaPredicted RBP3.74□□□□□ -1.81
CD44-213ENST00000525209 LRRC37A3O60309 1634 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 CCDC88AQ3V6T2 1871 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 SHANK3Q9BYB0 1731 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 PPIP5K1Q6PFW1 1433 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 IGLV9-49A0A0B4J1Y8 123 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 RPS10-NUDT3A0A1W2PQS6 291 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 MEIOCA2RUB1 952 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 MIF4GDA9UHW6 222 aaKnown RBP3.73□□□□□ -1.81
CD44-213ENST00000525209 SMKR1H3BMG3 65 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 UBDO15205 165 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 TYROBPO43914 113 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 NOS1APO75052 506 aaPredicted RBP3.73□□□□□ -1.81
CD44-213ENST00000525209 SMIM24O75264 130 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 TBX6O95947 436 aaPredicted RBP3.73□□□□□ -1.81
CD44-213ENST00000525209 NUDT3O95989 172 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 PPBPP02775 128 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 MT-ND4P03905 459 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 CST2P09228 141 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 OR8U9P0C7N5 309 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 RPL35AP18077 110 aaKnown RBP3.73□□□□□ -1.81
CD44-213ENST00000525209 ALOX5APP20292 161 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 F8A1P23610 371 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 ADORA1P30542 326 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 PMELP40967 661 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 GLP1RP43220 463 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 GSSP48637 474 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 ATP4BP51164 291 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 RBX1P62877 108 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 SKP2Q13309 424 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 TRIP13Q15645 432 aaPredicted RBP3.73□□□□□ -1.81
CD44-213ENST00000525209 ATP6AP1Q15904 470 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 ZNF260Q3ZCT1 412 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 SLC36A1Q7Z2H8 476 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 ISCA2Q86U28 154 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 HORMAD1Q86X24 394 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 NIT1Q86X76 327 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 DHFR2Q86XF0 187 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 SLC30A8Q8IWU4 369 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 KIRREL3Q8IZU9 778 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 FBXL14Q8N1E6 418 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 ATPAF2Q8N5M1 289 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 ZNF383Q8NA42 475 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 GPR32P1Q8NGA4 272 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 OR4D10Q8NGI6 311 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 OR8U1Q8NH10 309 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 C16orf78Q8WTQ4 265 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 TRUB1Q8WWH5 349 aaKnown RBP3.73□□□□□ -1.81
CD44-213ENST00000525209 EEF1AKMT3Q96AZ1 226 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 DNAJC19Q96DA6 116 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 CMTM7Q96FZ5 175 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 POM121L2Q96KW2 1035 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 RILPQ96NA2 401 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 NODALQ96S42 347 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 PHB2Q99623 299 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 GPR21Q99679 349 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 PDCD1LG2Q9BQ51 273 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 SLC25A33Q9BSK2 321 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 TIPINQ9BVW5 301 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 BOLA2Q9H3K6 86 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 PLEKHA3Q9HB20 300 aa3.73□□□□□ -1.81
CD44-213ENST00000525209 ELL3Q9HB65 397 aaPredicted RBP3.73□□□□□ -1.81
CD44-213ENST00000525209 ZBTB20Q9HC78 741 aaPredicted RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms