RNA–Protein interactions for RNA: ENST00000521049.5

TRAM1-204, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 872 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-204ENST00000521049 CMTM4Q8IZR5 234 aa13.48□□□□□ -0.25
TRAM1-204ENST00000521049 ST8SIA4Q92187 359 aa13.48□□□□□ -0.25
TRAM1-204ENST00000521049 PPP1R14AQ96A00 147 aa13.48□□□□□ -0.25
TRAM1-204ENST00000521049 RSRC1Q96IZ7 334 aaKnown RBP13.48□□□□□ -0.25
TRAM1-204ENST00000521049 C14orf119Q9NWQ9 140 aa13.48□□□□□ -0.25
TRAM1-204ENST00000521049 LOC100653049A0A140TA62 436 aa13.47□□□□□ -0.25
TRAM1-204ENST00000521049 ANKRD61A6NGH8 418 aa13.47□□□□□ -0.25
TRAM1-204ENST00000521049 GGT3PA6NGU5 568 aa13.47□□□□□ -0.25
TRAM1-204ENST00000521049 UNC119BA6NIH7 251 aa13.47□□□□□ -0.25
TRAM1-204ENST00000521049 M0R135 149 aa13.47□□□□□ -0.25
TRAM1-204ENST00000521049 KRT34O76011 436 aa13.47□□□□□ -0.25
TRAM1-204ENST00000521049 MUC1P15941 1255 aaPredicted RBP13.47□□□□□ -0.25
TRAM1-204ENST00000521049 GABRA5P31644 462 aa13.47□□□□□ -0.25
TRAM1-204ENST00000521049 POU4F2Q12837 409 aa13.47□□□□□ -0.25
TRAM1-204ENST00000521049 C11orf88Q6PI97 169 aa13.47□□□□□ -0.25
TRAM1-204ENST00000521049 ZBTB46Q86UZ6 589 aa13.47□□□□□ -0.25
TRAM1-204ENST00000521049 SPTSSAQ969W0 71 aa13.47□□□□□ -0.25
TRAM1-204ENST00000521049 ZNF799Q96GE5 643 aa13.47□□□□□ -0.25
TRAM1-204ENST00000521049 ERMAPQ96PL5 475 aaPredicted RBP13.47□□□□□ -0.25
TRAM1-204ENST00000521049 TMEM120AQ9BXJ8 343 aa13.47□□□□□ -0.25
TRAM1-204ENST00000521049 SEMA6AQ9H2E6 1030 aa13.47□□□□□ -0.25
TRAM1-204ENST00000521049 RNPEPL1Q9HAU8 725 aa13.47□□□□□ -0.25
TRAM1-204ENST00000521049 ONECUT1Q9UBC0 465 aa13.47□□□□□ -0.25
TRAM1-204ENST00000521049 ENPP4Q9Y6X5 453 aa13.47□□□□□ -0.25
TRAM1-204ENST00000521049 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.46□□□□□ -0.25
TRAM1-204ENST00000521049 hCG_1807616A0A1W2PRN6 198 aa13.46□□□□□ -0.25
TRAM1-204ENST00000521049 A6NLC8 198 aa13.46□□□□□ -0.25
TRAM1-204ENST00000521049 CXCR6O00574 342 aa13.46□□□□□ -0.25
TRAM1-204ENST00000521049 BHLHE40O14503 412 aa13.46□□□□□ -0.25
TRAM1-204ENST00000521049 NPFFO15130 113 aa13.46□□□□□ -0.25
TRAM1-204ENST00000521049 ARPC3O15145 178 aa13.46□□□□□ -0.25
TRAM1-204ENST00000521049 RENP00797 406 aa13.46□□□□□ -0.25
TRAM1-204ENST00000521049 PRB2P02812 416 aaPredicted RBP13.46□□□□□ -0.25
TRAM1-204ENST00000521049 H1F0P07305 194 aaKnown RBP13.46□□□□□ -0.25
TRAM1-204ENST00000521049 GRK5P34947 590 aa13.46□□□□□ -0.25
TRAM1-204ENST00000521049 MICBQ29980 383 aa13.46□□□□□ -0.25
TRAM1-204ENST00000521049 RFX4Q33E94 735 aa13.46□□□□□ -0.25
TRAM1-204ENST00000521049 SMARCD3Q6STE5 483 aa13.46□□□□□ -0.25
TRAM1-204ENST00000521049 C1orf122Q6ZSJ8 110 aa13.46□□□□□ -0.25
TRAM1-204ENST00000521049 CFHR4Q92496 578 aa13.46□□□□□ -0.25
TRAM1-204ENST00000521049 HSH2DQ96JZ2 352 aa13.46□□□□□ -0.25
TRAM1-204ENST00000521049 NMNAT3Q96T66 252 aa13.46□□□□□ -0.25
TRAM1-204ENST00000521049 VIPAS39Q9H9C1 493 aa13.46□□□□□ -0.25
TRAM1-204ENST00000521049 CMTM6Q9NX76 183 aa13.46□□□□□ -0.25
TRAM1-204ENST00000521049 KCNG2Q9UJ96 466 aa13.46□□□□□ -0.25
TRAM1-204ENST00000521049 IGHV3OR15-7A0A075B7D8 119 aa13.45□□□□□ -0.26
TRAM1-204ENST00000521049 OTX1P32242 354 aaPredicted RBP13.45□□□□□ -0.26
TRAM1-204ENST00000521049 KIR2DS4P43632 304 aa13.45□□□□□ -0.26
TRAM1-204ENST00000521049 SNAI3Q3KNW1 292 aa13.45□□□□□ -0.26
TRAM1-204ENST00000521049 SLC36A1Q7Z2H8 476 aa13.45□□□□□ -0.26
TRAM1-204ENST00000521049 C11orf53Q8IXP5 236 aa13.45□□□□□ -0.26
TRAM1-204ENST00000521049 SLC15A3Q8IY34 581 aa13.45□□□□□ -0.26
TRAM1-204ENST00000521049 FGFRL1Q8N441 504 aa13.45□□□□□ -0.26
TRAM1-204ENST00000521049 MAP6Q96JE9 813 aa13.45□□□□□ -0.26
TRAM1-204ENST00000521049 CCL13Q99616 98 aa13.45□□□□□ -0.26
TRAM1-204ENST00000521049 PPA2Q9H2U2 334 aa13.45□□□□□ -0.26
TRAM1-204ENST00000521049 KRCC1Q9NPI7 259 aaPredicted RBP13.45□□□□□ -0.26
TRAM1-204ENST00000521049 SAR1AQ9NR31 198 aa13.45□□□□□ -0.26
TRAM1-204ENST00000521049 SIRT7Q9NRC8 400 aa13.45□□□□□ -0.26
TRAM1-204ENST00000521049 PRPF19Q9UMS4 504 aaKnown RBP13.45□□□□□ -0.26
TRAM1-204ENST00000521049 FAM32AQ9Y421 112 aaKnown RBP13.45□□□□□ -0.26
TRAM1-204ENST00000521049 GSTA4O15217 222 aa13.44□□□□□ -0.26
TRAM1-204ENST00000521049 NDUFB3O43676 98 aa13.44□□□□□ -0.26
TRAM1-204ENST00000521049 PAHP00439 452 aa13.44□□□□□ -0.26
TRAM1-204ENST00000521049 SERPINA1P01009 418 aa13.44□□□□□ -0.26
TRAM1-204ENST00000521049 HLA-DQA2P01906 255 aa13.44□□□□□ -0.26
TRAM1-204ENST00000521049 TROVE2P10155 538 aaKnown RBP eCLIP13.44□□□□□ -0.26
TRAM1-204ENST00000521049 RHCEP18577 417 aa13.44□□□□□ -0.26
TRAM1-204ENST00000521049 DDOSTP39656 456 aa13.44□□□□□ -0.26
TRAM1-204ENST00000521049 TGM4P49221 684 aa13.44□□□□□ -0.26
TRAM1-204ENST00000521049 UBE2E1P51965 193 aa13.44□□□□□ -0.26
TRAM1-204ENST00000521049 EFNB2P52799 333 aa13.44□□□□□ -0.26
TRAM1-204ENST00000521049 LOXL3P58215 753 aa13.44□□□□□ -0.26
TRAM1-204ENST00000521049 LIPEQ05469 1076 aa13.44□□□□□ -0.26
TRAM1-204ENST00000521049 ACSM1Q08AH1 577 aa13.44□□□□□ -0.26
TRAM1-204ENST00000521049 GLYATL3Q5SZD4 288 aa13.44□□□□□ -0.26
TRAM1-204ENST00000521049 DRAM2Q6UX65 266 aa13.44□□□□□ -0.26
TRAM1-204ENST00000521049 ARPINQ7Z6K5 226 aa13.44□□□□□ -0.26
TRAM1-204ENST00000521049 Q8N7P7 452 aa13.44□□□□□ -0.26
TRAM1-204ENST00000521049 OR4K13Q8NH42 304 aa13.44□□□□□ -0.26
TRAM1-204ENST00000521049 OR2AE1Q8NHA4 323 aa13.44□□□□□ -0.26
TRAM1-204ENST00000521049 C8orf46Q8TAG6 207 aa13.44□□□□□ -0.26
TRAM1-204ENST00000521049 TNFRSF14Q92956 283 aa13.44□□□□□ -0.26
TRAM1-204ENST00000521049 C12orf43Q96C57 262 aaKnown RBP13.44□□□□□ -0.26
TRAM1-204ENST00000521049 DCTN5Q9BTE1 182 aa13.44□□□□□ -0.26
TRAM1-204ENST00000521049 OPA3Q9H6K4 179 aa13.44□□□□□ -0.26
TRAM1-204ENST00000521049 RPRD1BQ9NQG5 326 aaKnown RBP13.44□□□□□ -0.26
TRAM1-204ENST00000521049 MRPL22Q9NWU5 206 aaKnown RBP13.44□□□□□ -0.26
TRAM1-204ENST00000521049 GMPR2Q9P2T1 348 aaKnown RBP13.44□□□□□ -0.26
TRAM1-204ENST00000521049 MEIOCA2RUB1 952 aa13.43□□□□□ -0.26
TRAM1-204ENST00000521049 IDH3BO43837 385 aa13.43□□□□□ -0.26
TRAM1-204ENST00000521049 HIST1H1CP16403 213 aaKnown RBP13.43□□□□□ -0.26
TRAM1-204ENST00000521049 ZNF823P16415 610 aa13.43□□□□□ -0.26
TRAM1-204ENST00000521049 SLC6A6P31641 620 aa13.43□□□□□ -0.26
TRAM1-204ENST00000521049 SEC23BQ15437 767 aa13.43□□□□□ -0.26
TRAM1-204ENST00000521049 PCK2Q16822 640 aa13.43□□□□□ -0.26
TRAM1-204ENST00000521049 FGD3Q5JSP0 725 aa13.43□□□□□ -0.26
TRAM1-204ENST00000521049 WDR38Q5JTN6 314 aa13.43□□□□□ -0.26
TRAM1-204ENST00000521049 ATPAF1Q5TC12 328 aaPredicted RBP13.43□□□□□ -0.26
TRAM1-204ENST00000521049 BEND2Q8NDZ0 799 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms