RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 DMRT1Q9Y5R6 373 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 TENM2Q9NT68 2774 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 STAB2Q8WWQ8 2551 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 A0A087WUJ7 227 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 LCE6AA0A183 80 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 A0A1B0GVI7 797 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 CCDC154A6NI56 674 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 AQP12BA6NM10 295 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 CENPBD1B2RD01 187 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 MS4A18H0YCH9 400 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 H0YJX3 145 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 HMGN4O00479 90 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 FBP2O00757 339 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 ANGPT2O15123 496 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 TIMM8AO60220 97 aaPredicted RBP4.03□□□□□ -1.76
SDCBP-207ENST00000520168 IFNA14P01570 189 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 SCG5P05408 212 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 GKN3PP0CG01 181 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 CCL2P13500 99 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 HSD17B1P14061 328 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 MMP9P14780 707 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 FAHP16930 419 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 HOXB6P17509 224 aaKnown RBP4.03□□□□□ -1.76
SDCBP-207ENST00000520168 M6PRP20645 277 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 CCNOP22674 350 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 STOMP27105 288 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 GRPRP30550 384 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 RRM2P31350 389 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 CHI3L1P36222 383 aaPredicted RBP4.03□□□□□ -1.76
SDCBP-207ENST00000520168 CRATP43155 626 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 ZNF84P51523 738 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 POLR2JP52435 117 aaKnown RBP4.03□□□□□ -1.76
SDCBP-207ENST00000520168 PRRX1P54821 245 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 PCBP3P57721 371 aaKnown RBP4.03□□□□□ -1.76
SDCBP-207ENST00000520168 POLR2GP62487 172 aaKnown RBP eCLIP4.03□□□□□ -1.76
SDCBP-207ENST00000520168 VAMP2P63027 116 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 MS4A18Q3C1V0 323 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 KCTD21Q4G0X4 260 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 C6orf136Q5SQH8 315 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 THEM4Q5T1C6 240 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 WDR25Q64LD2 544 aaPredicted RBP4.03□□□□□ -1.76
SDCBP-207ENST00000520168 SLC35E4Q6ICL7 350 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 TNFAIP8L2Q6P589 184 aaPredicted RBP4.03□□□□□ -1.76
SDCBP-207ENST00000520168 METAP1DQ6UB28 335 aaPredicted RBP4.03□□□□□ -1.76
SDCBP-207ENST00000520168 OLIG3Q7RTU3 272 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 HDDC2Q7Z4H3 204 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 ARPINQ7Z6K5 226 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 DHDDSQ86SQ9 333 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 SLC51BQ86UW2 128 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 DHFR2Q86XF0 187 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 FUNDC1Q8IVP5 155 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 AQP12AQ8IXF9 295 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 SLC15A3Q8IY34 581 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 KLHDC1Q8N7A1 406 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 FAM156AQ8NDB6 213 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 NPEPL1Q8NDH3 523 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 WFDC9Q8NEX5 89 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 OR2Z1Q8NG97 314 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 OR4A15Q8NGL6 344 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 OR6X1Q8NH79 312 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 SLC25A40Q8TBP6 338 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 DNAJA4Q8WW22 397 aaPredicted RBP4.03□□□□□ -1.76
SDCBP-207ENST00000520168 NRG4Q8WWG1 115 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 DPF1Q92782 380 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 ZNF566Q969W8 418 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 CCDC124Q96CT7 223 aaKnown RBP4.03□□□□□ -1.76
SDCBP-207ENST00000520168 R3HDM4Q96D70 268 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 SPDL1Q96EA4 605 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 SLC41A3Q96GZ6 507 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 SLC25A44Q96H78 314 aaPredicted RBP4.03□□□□□ -1.76
SDCBP-207ENST00000520168 Q96M66 194 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 ZNF570Q96NI8 536 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 WDFY2Q96P53 400 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 ZNF184Q99676 751 aaPredicted RBP4.03□□□□□ -1.76
SDCBP-207ENST00000520168 ECSITQ9BQ95 431 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 EMC6Q9BV81 110 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 OR2J1Q9GZK6 312 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 VCXQ9H320 206 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 RIBC2Q9H4K1 309 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 Q9H521 79 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 SPACA1Q9HBV2 294 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 MSL2Q9HCI7 577 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 GCM1Q9NP62 436 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 TRIM36Q9NQ86 728 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 ASIC5Q9NY37 505 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 MRPL39Q9NYK5 338 aaKnown RBP4.03□□□□□ -1.76
SDCBP-207ENST00000520168 GLTPQ9NZD2 209 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 RPS6KB2Q9UBS0 482 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 AP4S1Q9Y587 144 aa4.03□□□□□ -1.76
SDCBP-207ENST00000520168 LOC100506127A0A0U1RQW1 187 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 PRSS51A0A1B0GVH4 220 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 TCRBV3S1A0A5B6 114 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 XKRY2A2RUG3 117 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 HTR3EA5X5Y0 456 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 MAGEA13PA6NCF6 341 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 SNTNA6NMZ2 147 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 SCGB1D1O95968 90 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 MT-ATP6P00846 226 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 IL6P05231 212 aa4.02□□□□□ -1.77
SDCBP-207ENST00000520168 ALDOCP09972 364 aaKnown RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms