RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 MS4A18Q3C1V0 323 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 NSUN5P1Q3KNT7 163 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 ZNF404Q494X3 552 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 DMRTC1Q5HYR2 192 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 PHYHD1Q5SRE7 291 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 LCE3CQ5T5A8 94 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 FAM69AQ5T7M9 428 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 SERTAD4-AS1Q5TG53 156 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 ASPHD1Q5U4P2 390 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 ANKRD26P1Q6NSI1 321 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 ARL9Q6T311 187 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 UNQ9370/PRO34162Q6UXP9 181 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 SLC16A12Q6ZSM3 486 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 RPS27LQ71UM5 84 aaKnown RBP2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 ZNF771Q7L3S4 317 aaPredicted RBP2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 PXKQ7Z7A4 578 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 TEX45Q8NA69 505 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 SCCPDHQ8NBX0 429 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 OR5D16Q8NGK9 328 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 OR6N1Q8NGY5 312 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 OR6S1Q8NH40 331 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 GEMIN6Q8WXD5 167 aaKnown RBP2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 SLC35B4Q969S0 331 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 ERGIC1Q969X5 290 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 ROPN1LQ96C74 230 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 SLC25A36Q96CQ1 311 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 CCDC126Q96EE4 140 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 L3HYPDHQ96EM0 354 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 TMEM246Q9BRR3 403 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 CDCA4Q9BXL8 241 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 ULBP2Q9BZM5 246 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 DPY30Q9C005 99 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 KCNN2Q9H2S1 579 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 PPA2Q9H2U2 334 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 ELOVL3Q9HB03 270 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 C12orf10Q9HB07 376 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 MID1IP1Q9NPA3 183 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 LZTFL1Q9NQ48 299 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 KIAA1456Q9P272 454 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 ERVK-18Q9QC07 812 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 NLKQ9UBE8 527 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 IL36RNQ9UBH0 155 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 PEMTQ9UBM1 199 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 FOXJ3Q9UPW0 622 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 KPTNQ9Y664 436 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 HUWE1Q7Z6Z7 4374 aaKnown RBP2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 A0A1B0GVI7 797 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 RPS10-NUDT3A0A1W2PQS6 291 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 AP3D1O14617 1153 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 ZNF500O60304 480 aaPredicted RBP2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 BCAS1O75363 584 aaPredicted RBP2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 KRT36O76013 467 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 CLIC3O95833 236 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 GSTA1P08263 222 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 HOXB5P09067 269 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 PATE4P0C8F1 98 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 CD28P10747 220 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 THRBP10828 461 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 LAMP1P11279 417 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 NEFHP12036 1026 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 CCL2P13500 99 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 ZNF26P17031 533 aaPredicted RBP2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 SDC1P18827 310 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 PRPS1L1P21108 318 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 KITLGP21583 273 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 STOMP27105 288 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 HPCAL1P37235 193 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 ACAA2P42765 397 aaKnown RBP2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 MAGEA4P43358 317 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 CSNK1A1P48729 337 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 SRP9P49458 86 aaKnown RBP2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 SERPINB9P50453 376 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 CCR9P51686 369 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 ARHGDIAP52565 204 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 ERVS71-1P61550 626 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 UFM1P61960 85 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 HBA1P69905 142 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 ACSM1Q08AH1 577 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 PSG7Q13046 419 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 CDONQ4KMG0 1287 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 RFTN2Q52LD8 501 aaPredicted RBP2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 SPRNQ5BIV9 151 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 TCTEX1D4Q5JR98 221 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 CEP85LQ5SZL2 805 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 SPSB3Q6PJ21 355 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 LRRC74BQ6ZQY2 392 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 SLC16A14Q7RTX9 510 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 TBC1D26Q86UD7 250 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 Q8N2B8 174 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 ICA1LQ8NDH6 482 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 OR2Z1Q8NG97 314 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 SLC25A40Q8TBP6 338 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 PTP4A1Q93096 173 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 LHX4Q969G2 390 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 SLC38A4Q969I6 547 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 TMEM54Q969K7 222 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 TMEM18Q96B42 140 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 SLC41A3Q96GZ6 507 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 POM121L2Q96KW2 1035 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 ZNF583Q96ND8 569 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms