RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 PRKXP51817 358 aa7.42□□□□□ -1.22
PDLIM5-213ENST00000509357 CXCR4P61073 352 aa7.42□□□□□ -1.22
PDLIM5-213ENST00000509357 TNFAIP6P98066 277 aaPredicted RBP7.42□□□□□ -1.22
PDLIM5-213ENST00000509357 HOXA4Q00056 320 aaPredicted RBP7.42□□□□□ -1.22
PDLIM5-213ENST00000509357 PSG7Q13046 419 aa7.42□□□□□ -1.22
PDLIM5-213ENST00000509357 CDK5R2Q13319 367 aa7.42□□□□□ -1.22
PDLIM5-213ENST00000509357 CR1LQ2VPA4 569 aa7.42□□□□□ -1.22
PDLIM5-213ENST00000509357 FAM209AQ5JX71 171 aa7.42□□□□□ -1.22
PDLIM5-213ENST00000509357 GLYATL3Q5SZD4 288 aa7.42□□□□□ -1.22
PDLIM5-213ENST00000509357 IZUMO2Q6UXV1 221 aa7.42□□□□□ -1.22
PDLIM5-213ENST00000509357 PEG10Q86TG7 708 aaKnown RBP7.42□□□□□ -1.22
PDLIM5-213ENST00000509357 GLCCI1Q86VQ1 547 aa7.42□□□□□ -1.22
PDLIM5-213ENST00000509357 GID4Q8IVV7 300 aa7.42□□□□□ -1.22
PDLIM5-213ENST00000509357 DHRSXQ8N5I4 330 aa7.42□□□□□ -1.22
PDLIM5-213ENST00000509357 OR52I1Q8NGK6 324 aa7.42□□□□□ -1.22
PDLIM5-213ENST00000509357 CLDND2Q8NHS1 167 aa7.42□□□□□ -1.22
PDLIM5-213ENST00000509357 THEM6Q8WUY1 208 aa7.42□□□□□ -1.22
PDLIM5-213ENST00000509357 TRUB1Q8WWH5 349 aaKnown RBP7.42□□□□□ -1.22
PDLIM5-213ENST00000509357 RAB1CQ92928 201 aa7.42□□□□□ -1.22
PDLIM5-213ENST00000509357 RNFT2Q96EX2 444 aa7.42□□□□□ -1.22
PDLIM5-213ENST00000509357 OR8B4Q96RC9 309 aa7.42□□□□□ -1.22
PDLIM5-213ENST00000509357 DIRC2Q96SL1 478 aa7.42□□□□□ -1.22
PDLIM5-213ENST00000509357 CNN2Q99439 309 aaKnown RBP7.42□□□□□ -1.22
PDLIM5-213ENST00000509357 YIPF3Q9GZM5 350 aa7.42□□□□□ -1.22
PDLIM5-213ENST00000509357 MSL2Q9HCI7 577 aa7.42□□□□□ -1.22
PDLIM5-213ENST00000509357 TUBG2Q9NRH3 451 aa7.42□□□□□ -1.22
PDLIM5-213ENST00000509357 CENPMQ9NSP4 180 aa7.42□□□□□ -1.22
PDLIM5-213ENST00000509357 FAM206AQ9NX38 181 aa7.42□□□□□ -1.22
PDLIM5-213ENST00000509357 PTTG3PQ9NZH4 202 aa7.42□□□□□ -1.22
PDLIM5-213ENST00000509357 CGGBP1Q9UFW8 167 aaPredicted RBP7.42□□□□□ -1.22
PDLIM5-213ENST00000509357 WARS2Q9UGM6 360 aaKnown RBP7.42□□□□□ -1.22
PDLIM5-213ENST00000509357 ENOPH1Q9UHY7 261 aa7.42□□□□□ -1.22
PDLIM5-213ENST00000509357 ATPIF1Q9UII2 106 aa7.42□□□□□ -1.22
PDLIM5-213ENST00000509357 ZDHHC8Q9ULC8 765 aa7.42□□□□□ -1.22
PDLIM5-213ENST00000509357 EXOGQ9Y2C4 368 aaKnown RBP7.42□□□□□ -1.22
PDLIM5-213ENST00000509357 ORC6Q9Y5N6 252 aa7.42□□□□□ -1.22
PDLIM5-213ENST00000509357 CUBNO60494 3623 aa7.42□□□□□ -1.22
PDLIM5-213ENST00000509357 ZSCAN5BA6NJL1 495 aa7.41□□□□□ -1.22
PDLIM5-213ENST00000509357 RNF212BA8MTL3 300 aa7.41□□□□□ -1.22
PDLIM5-213ENST00000509357 ZNF878C9JN71 531 aa7.41□□□□□ -1.22
PDLIM5-213ENST00000509357 H0YAE9 185 aa7.41□□□□□ -1.22
PDLIM5-213ENST00000509357 H0YHG0 523 aa7.41□□□□□ -1.22
PDLIM5-213ENST00000509357 M0R135 149 aa7.41□□□□□ -1.22
PDLIM5-213ENST00000509357 RP2O75695 350 aa7.41□□□□□ -1.22
PDLIM5-213ENST00000509357 IGLV3-1P01715 115 aa7.41□□□□□ -1.22
PDLIM5-213ENST00000509357 IGHA1P01876 353 aa7.41□□□□□ -1.22
PDLIM5-213ENST00000509357 CX3CR1P49238 355 aa7.41□□□□□ -1.22
PDLIM5-213ENST00000509357 ZNF121P58317 390 aaPredicted RBP7.41□□□□□ -1.22
PDLIM5-213ENST00000509357 IL5RAQ01344 420 aa7.41□□□□□ -1.22
PDLIM5-213ENST00000509357 ROM1Q03395 351 aa7.41□□□□□ -1.22
PDLIM5-213ENST00000509357 ZNF92Q03936 586 aa7.41□□□□□ -1.22
PDLIM5-213ENST00000509357 SLC3A1Q07837 685 aa7.41□□□□□ -1.22
PDLIM5-213ENST00000509357 XAF1Q6GPH4 301 aa7.41□□□□□ -1.22
PDLIM5-213ENST00000509357 OR5AS1Q8N127 324 aa7.41□□□□□ -1.22
PDLIM5-213ENST00000509357 OR2Z1Q8NG97 314 aa7.41□□□□□ -1.22
PDLIM5-213ENST00000509357 ZNF799Q96GE5 643 aa7.41□□□□□ -1.22
PDLIM5-213ENST00000509357 DCLRE1CQ96SD1 692 aaKnown RBP7.41□□□□□ -1.22
PDLIM5-213ENST00000509357 KCNJ15Q99712 375 aa7.41□□□□□ -1.22
PDLIM5-213ENST00000509357 MDFIQ99750 246 aa7.41□□□□□ -1.22
PDLIM5-213ENST00000509357 COPS4Q9BT78 406 aa7.41□□□□□ -1.22
PDLIM5-213ENST00000509357 FGF23Q9GZV9 251 aaPredicted RBP7.41□□□□□ -1.22
PDLIM5-213ENST00000509357 ISG20L2Q9H9L3 353 aaKnown RBP7.41□□□□□ -1.22
PDLIM5-213ENST00000509357 G6PC2Q9NQR9 355 aa7.41□□□□□ -1.22
PDLIM5-213ENST00000509357 MRPS18AQ9NVS2 196 aaKnown RBP7.41□□□□□ -1.22
PDLIM5-213ENST00000509357 FKBP14Q9NWM8 211 aa7.41□□□□□ -1.22
PDLIM5-213ENST00000509357 CLN6Q9NWW5 311 aa7.41□□□□□ -1.22
PDLIM5-213ENST00000509357 IMPAD1Q9NX62 359 aa7.41□□□□□ -1.22
PDLIM5-213ENST00000509357 UBAP1Q9NZ09 502 aa7.41□□□□□ -1.22
PDLIM5-213ENST00000509357 CLEC2DQ9UHP7 191 aa7.41□□□□□ -1.22
PDLIM5-213ENST00000509357 PURGQ9UJV8 347 aaKnown RBP7.41□□□□□ -1.22
PDLIM5-213ENST00000509357 CACNG2Q9Y698 323 aa7.41□□□□□ -1.22
PDLIM5-213ENST00000509357 E9PI62 339 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 H0YJX3 145 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 H0YL77 283 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 WNT9BO14905 357 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 MLNRO43193 412 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 LALBAP00709 142 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 LCATP04180 440 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 LIMS3P0CW19 117 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 LIMS4P0CW20 117 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 TNFRSF1AP19438 455 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 ACKR3P25106 362 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 KIR3DL2P43630 455 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 MTNR1AP48039 350 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 BLVRAP53004 296 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 NANOS3P60323 173 aaKnown RBP7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 ECH1Q13011 328 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 MALLQ13021 153 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 GK2Q14410 553 aaPredicted RBP7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 TAF13Q15543 124 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 TP53I3Q53FA7 332 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 LCN1P1Q5VSP4 162 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 FAHD2BQ6P2I3 314 aaPredicted RBP7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 ZNF322Q6U7Q0 402 aaPredicted RBP7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 PRSS35Q8N3Z0 413 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 ZNF485Q8NCK3 441 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 OR8B12Q8NGG6 310 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 OR51F2Q8NH61 342 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 GGHQ92820 318 aa7.4□□□□□ -1.22
PDLIM5-213ENST00000509357 DVL3Q92997 716 aaPredicted RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms