RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 LOXP28300 417 aaPredicted RBP1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 HTR1EP28566 365 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 ARL2P36404 184 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 SERPINB5P36952 375 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 GPX4P36969 197 aaPredicted RBP1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 CEACAM3P40198 252 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 CSNK1DP48730 415 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 TGM4P49221 684 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 RGS6P49758 472 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 RPL14P50914 215 aaKnown RBP1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 RAB7AP51149 207 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 FABP6P51161 128 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 CEBPGP53567 150 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 AP1S2P56377 157 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 NUP107P57740 925 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 MLF1P58340 268 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 PAFAH1B2P68402 229 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 ZNF763Q0D2J5 394 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 PDIA2Q13087 525 aaKnown RBP1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 TPBGQ13641 420 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 GPNMBQ14956 572 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 PSG5Q15238 335 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 ATP6AP1Q15904 470 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 POU2AF1Q16633 256 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 GOLGA7BQ2TAP0 167 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 TMEM249Q2WGJ8 235 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 SLC36A2Q495M3 483 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 C2orf83Q53S99 150 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 PIGGQ5H8A4 983 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 C1orf100Q5SVJ3 147 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 THEM4Q5T1C6 240 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 IDNKQ5T6J7 187 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 THOC7Q6I9Y2 204 aaKnown RBP1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 CNIH2Q6PI25 160 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 RNF165Q6ZSG1 346 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 TMEM179Q6ZVK1 233 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 PRSS41Q7RTY9 318 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 PAGE2Q7Z2X7 111 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 MRPL52Q86TS9 123 aaKnown RBP1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 KRTAP11-1Q8IUC1 163 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 SLC34A3Q8N130 599 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 C6orf223Q8N319 242 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 MREGQ8N565 214 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 NKAPP1Q8N9T2 125 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 C20orf203Q8NBC4 194 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 HSD17B11Q8NBQ5 300 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 CCDC112Q8NEF3 446 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 LFNGQ8NES3 379 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 OR6Q1Q8NGQ2 317 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 MCOLN3Q8TDD5 553 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 SDR42E1Q8WUS8 393 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 DNAJB3Q8WWF6 145 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 TMEM234Q8WY98 164 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 CDS1Q92903 461 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 UCN3Q969E3 161 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 ELSPBP1Q96BH3 223 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 PPP1R14BQ96C90 147 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 CMTM5Q96DZ9 223 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 MED8Q96G25 268 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 ADTRPQ96IZ2 230 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 ZNF681Q96N22 645 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 P2RX4Q99571 388 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 ZNF426Q9BUY5 554 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 BEX2Q9BXY8 128 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 API5Q9BZZ5 524 aaKnown RBP1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 ING2Q9H160 280 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 C20orf85Q9H1P6 137 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 VCX3BQ9H321 246 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 REEP1Q9H902 201 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 SLC25A22Q9H936 323 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 NANOGQ9H9S0 305 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 TMBIM4Q9HC24 238 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 ISYNA1Q9NPH2 558 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 KCNJ16Q9NPI9 418 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 CYB5R1Q9UHQ9 305 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 CES1P1Q9UKY3 287 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 ACOT9Q9Y305 439 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 KLF12Q9Y4X4 402 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 OR51B2Q9Y5P1 312 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 ABCB11O95342 1321 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 PLB1Q6P1J6 1458 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 MSH6P52701 1360 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 A0A0G2JLM5 398 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 ZNF726A6NNF4 738 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 NCBP2LA6PVI3 153 aaKnown RBP1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 HIDE1A8MVS5 230 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 CENPBD1B2RD01 187 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 SLC16A4O15374 487 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 TRAPPC3O43617 180 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 ENSAO43768 121 aaKnown RBP1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 ZNF861PO60384 105 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 NPIPB7O75200 414 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 ADAP1O75689 374 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 SRP72O76094 671 aaKnown RBP1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 RPP14O95059 124 aaKnown RBP1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 KLF8O95600 359 aaPredicted RBP1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 TTC4O95801 387 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 OXTP01178 125 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 ORM1P02763 201 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 OR5AL1P0C617 328 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms