RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, human

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT3A-215	ENST00000496570	PTBP3	O95758	552 aa	Known RBP	13.57	□□□□□ -0.24
DNMT3A-215	ENST00000496570	CD200	P41217	278 aa		13.57	□□□□□ -0.24
DNMT3A-215	ENST00000496570	ALDH3A2	P51648	485 aa		13.57	□□□□□ -0.24
DNMT3A-215	ENST00000496570	SLC3A1	Q07837	685 aa		13.57	□□□□□ -0.24
DNMT3A-215	ENST00000496570	ZMYND11	Q15326	602 aa		13.57	□□□□□ -0.24
DNMT3A-215	ENST00000496570	CBR4	Q8N4T8	237 aa		13.57	□□□□□ -0.24
DNMT3A-215	ENST00000496570	CELF2-AS1	Q8N7Q2	184 aa		13.57	□□□□□ -0.24
DNMT3A-215	ENST00000496570	DVL3	Q92997	716 aa	Predicted RBP	13.57	□□□□□ -0.24
DNMT3A-215	ENST00000496570	UBE2F	Q969M7	185 aa		13.57	□□□□□ -0.24
DNMT3A-215	ENST00000496570	TIMD4	Q96H15	378 aa		13.57	□□□□□ -0.24
DNMT3A-215	ENST00000496570	REEP6	Q96HR9	211 aa		13.57	□□□□□ -0.24
DNMT3A-215	ENST00000496570	LYZL4	Q96KX0	146 aa		13.57	□□□□□ -0.24
DNMT3A-215	ENST00000496570	MBOAT4	Q96T53	435 aa		13.57	□□□□□ -0.24
DNMT3A-215	ENST00000496570	CNN2	Q99439	309 aa	Known RBP	13.57	□□□□□ -0.24
DNMT3A-215	ENST00000496570	SLC29A1	Q99808	456 aa		13.57	□□□□□ -0.24
DNMT3A-215	ENST00000496570	OPA3	Q9H6K4	179 aa		13.57	□□□□□ -0.24
DNMT3A-215	ENST00000496570	PPP1R3E	Q9H7J1	279 aa		13.57	□□□□□ -0.24
DNMT3A-215	ENST00000496570	BRD7	Q9NPI1	651 aa		13.57	□□□□□ -0.24
DNMT3A-215	ENST00000496570	FAM206A	Q9NX38	181 aa		13.57	□□□□□ -0.24
DNMT3A-215	ENST00000496570	GGT3P	A6NGU5	568 aa		13.56	□□□□□ -0.24
DNMT3A-215	ENST00000496570	SLC22A31	A6NKX4	558 aa		13.56	□□□□□ -0.24
DNMT3A-215	ENST00000496570	SRSF10	O75494	262 aa	Known RBP	13.56	□□□□□ -0.24
DNMT3A-215	ENST00000496570	APOC1	P02654	83 aa		13.56	□□□□□ -0.24
DNMT3A-215	ENST00000496570	SRP9	P49458	86 aa	Known RBP	13.56	□□□□□ -0.24
DNMT3A-215	ENST00000496570	DVL1P1	P54792	670 aa	Predicted RBP	13.56	□□□□□ -0.24
DNMT3A-215	ENST00000496570	PSMA6	P60900	246 aa	Known RBP	13.56	□□□□□ -0.24
DNMT3A-215	ENST00000496570	MPPED2	Q15777	294 aa		13.56	□□□□□ -0.24
DNMT3A-215	ENST00000496570	FAM120AOS	Q5T036	256 aa		13.56	□□□□□ -0.24
DNMT3A-215	ENST00000496570	PRAMEF6	Q5VXH4	476 aa		13.56	□□□□□ -0.24
DNMT3A-215	ENST00000496570	DEGS2	Q6QHC5	323 aa		13.56	□□□□□ -0.24
DNMT3A-215	ENST00000496570	IL17REL	Q6ZVW7	336 aa		13.56	□□□□□ -0.24
DNMT3A-215	ENST00000496570	MOGAT3	Q86VF5	341 aa		13.56	□□□□□ -0.24
DNMT3A-215	ENST00000496570	LRRC28	Q86X40	367 aa	Predicted RBP	13.56	□□□□□ -0.24
DNMT3A-215	ENST00000496570	PQLC1	Q8N2U9	271 aa		13.56	□□□□□ -0.24
DNMT3A-215	ENST00000496570	OR8B12	Q8NGG6	310 aa		13.56	□□□□□ -0.24
DNMT3A-215	ENST00000496570	OR52H1	Q8NGJ2	320 aa		13.56	□□□□□ -0.24
DNMT3A-215	ENST00000496570	HRASLS5	Q96KN8	279 aa		13.56	□□□□□ -0.24
DNMT3A-215	ENST00000496570	OR8B4	Q96RC9	309 aa		13.56	□□□□□ -0.24
DNMT3A-215	ENST00000496570	TTTY10	Q9BZA0	68 aa		13.56	□□□□□ -0.24
DNMT3A-215	ENST00000496570	LPAR2	Q9HBW0	351 aa		13.56	□□□□□ -0.24
DNMT3A-215	ENST00000496570	CDC42EP3	Q9UKI2	254 aa		13.56	□□□□□ -0.24
DNMT3A-215	ENST00000496570	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	13.55	□□□□□ -0.24
DNMT3A-215	ENST00000496570	MAGEB4	O15481	346 aa	Predicted RBP	13.55	□□□□□ -0.24
DNMT3A-215	ENST00000496570	GMDS	O60547	372 aa		13.55	□□□□□ -0.24
DNMT3A-215	ENST00000496570	CYB5R3	P00387	301 aa	Predicted RBP	13.55	□□□□□ -0.24
DNMT3A-215	ENST00000496570	MSMB	P08118	114 aa		13.55	□□□□□ -0.24
DNMT3A-215	ENST00000496570	SBK2	P0C263	348 aa		13.55	□□□□□ -0.24
DNMT3A-215	ENST00000496570	ACKR3	P25106	362 aa		13.55	□□□□□ -0.24
DNMT3A-215	ENST00000496570	HTR1F	P30939	366 aa		13.55	□□□□□ -0.24
DNMT3A-215	ENST00000496570	GSK3A	P49840	483 aa		13.55	□□□□□ -0.24
DNMT3A-215	ENST00000496570	BTG1	P62324	171 aa		13.55	□□□□□ -0.24
DNMT3A-215	ENST00000496570	HOXA4	Q00056	320 aa	Predicted RBP	13.55	□□□□□ -0.24
DNMT3A-215	ENST00000496570	OR8B8	Q15620	311 aa		13.55	□□□□□ -0.24
DNMT3A-215	ENST00000496570	TIGD6	Q17RP2	521 aa		13.55	□□□□□ -0.24
DNMT3A-215	ENST00000496570	ZNF181	Q2M3W8	571 aa		13.55	□□□□□ -0.24
DNMT3A-215	ENST00000496570	CR1L	Q2VPA4	569 aa		13.55	□□□□□ -0.24
DNMT3A-215	ENST00000496570	ZIK1	Q3SY52	487 aa	Predicted RBP	13.55	□□□□□ -0.24
DNMT3A-215	ENST00000496570	CHRFAM7A	Q494W8	412 aa		13.55	□□□□□ -0.24
DNMT3A-215	ENST00000496570	ZNF771	Q7L3S4	317 aa	Predicted RBP	13.55	□□□□□ -0.24
DNMT3A-215	ENST00000496570	SSX6	Q7RTT6	188 aa		13.55	□□□□□ -0.24
DNMT3A-215	ENST00000496570	KRT77	Q7Z794	578 aa		13.55	□□□□□ -0.24
DNMT3A-215	ENST00000496570	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	13.55	□□□□□ -0.24
DNMT3A-215	ENST00000496570	GID4	Q8IVV7	300 aa		13.55	□□□□□ -0.24
DNMT3A-215	ENST00000496570	SLC35F2	Q8IXU6	374 aa		13.55	□□□□□ -0.24
DNMT3A-215	ENST00000496570	ZNF679	Q8IYX0	411 aa		13.55	□□□□□ -0.24
DNMT3A-215	ENST00000496570	OR8J1	Q8NGP2	316 aa		13.55	□□□□□ -0.24
DNMT3A-215	ENST00000496570		Q8TCH9	128 aa		13.55	□□□□□ -0.24
DNMT3A-215	ENST00000496570	EME1	Q96AY2	570 aa		13.55	□□□□□ -0.24
DNMT3A-215	ENST00000496570	PGAM5	Q96HS1	289 aa		13.55	□□□□□ -0.24
DNMT3A-215	ENST00000496570	ADAT1	Q9BUB4	502 aa	Known RBP	13.55	□□□□□ -0.24
DNMT3A-215	ENST00000496570	SLC22A4	Q9H015	551 aa		13.55	□□□□□ -0.24
DNMT3A-215	ENST00000496570	OR10A2	Q9H208	303 aa		13.55	□□□□□ -0.24
DNMT3A-215	ENST00000496570	NIPAL2	Q9H841	368 aa		13.55	□□□□□ -0.24
DNMT3A-215	ENST00000496570	SP140L	Q9H930	580 aa		13.55	□□□□□ -0.24
DNMT3A-215	ENST00000496570	H2AFY2	Q9P0M6	372 aa	Predicted RBP	13.55	□□□□□ -0.24
DNMT3A-215	ENST00000496570	FBN1	P35555	2871 aa	Known RBP	13.55	□□□□□ -0.24
DNMT3A-215	ENST00000496570	ISPD	A4D126	451 aa		13.54	□□□□□ -0.24
DNMT3A-215	ENST00000496570	PLPP2	O43688	288 aa		13.54	□□□□□ -0.24
DNMT3A-215	ENST00000496570	IGLV3-1	P01715	115 aa		13.54	□□□□□ -0.24
DNMT3A-215	ENST00000496570	DCTD	P32321	178 aa		13.54	□□□□□ -0.24
DNMT3A-215	ENST00000496570	CXCR4	P61073	352 aa		13.54	□□□□□ -0.24
DNMT3A-215	ENST00000496570	MFGE8	Q08431	387 aa	Predicted RBP	13.54	□□□□□ -0.24
DNMT3A-215	ENST00000496570	OR8G1	Q15617	311 aa		13.54	□□□□□ -0.24
DNMT3A-215	ENST00000496570	TMEM155	Q4W5P6	130 aa		13.54	□□□□□ -0.24
DNMT3A-215	ENST00000496570	FAM201A	Q5SY85	155 aa		13.54	□□□□□ -0.24
DNMT3A-215	ENST00000496570	WDR86	Q86TI4	376 aa		13.54	□□□□□ -0.24
DNMT3A-215	ENST00000496570	C10orf67	Q8IYJ2	551 aa		13.54	□□□□□ -0.24
DNMT3A-215	ENST00000496570	OR51G2	Q8NGK0	314 aa		13.54	□□□□□ -0.24
DNMT3A-215	ENST00000496570	ASB17	Q8WXJ9	295 aa		13.54	□□□□□ -0.24
DNMT3A-215	ENST00000496570	PPP1R14A	Q96A00	147 aa		13.54	□□□□□ -0.24
DNMT3A-215	ENST00000496570	TMEM186	Q96B77	213 aa		13.54	□□□□□ -0.24
DNMT3A-215	ENST00000496570	GAL3ST1	Q99999	423 aa		13.54	□□□□□ -0.24
DNMT3A-215	ENST00000496570	APOL4	Q9BPW4	351 aa		13.54	□□□□□ -0.24
DNMT3A-215	ENST00000496570	RGCC	Q9H4X1	137 aa		13.54	□□□□□ -0.24
DNMT3A-215	ENST00000496570	G6PC2	Q9NQR9	355 aa		13.54	□□□□□ -0.24
DNMT3A-215	ENST00000496570	CLN6	Q9NWW5	311 aa		13.54	□□□□□ -0.24
DNMT3A-215	ENST00000496570	WARS2	Q9UGM6	360 aa	Known RBP	13.54	□□□□□ -0.24
DNMT3A-215	ENST00000496570	RHBDD3	Q9Y3P4	386 aa		13.54	□□□□□ -0.24
DNMT3A-215	ENST00000496570	TMEM14A	Q9Y6G1	99 aa		13.54	□□□□□ -0.24
DNMT3A-215	ENST00000496570		F5H0A9	414 aa	Predicted RBP	13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms