RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 MCUBQ9NWR8 336 aa6.11□□□□□ -1.43
USP39-219ENST00000496047 PTTG3PQ9NZH4 202 aa6.11□□□□□ -1.43
USP39-219ENST00000496047 GHRLQ9UBU3 117 aa6.11□□□□□ -1.43
USP39-219ENST00000496047 ZNF107Q9UII5 783 aaPredicted RBP6.11□□□□□ -1.43
USP39-219ENST00000496047 RAB22AQ9UL26 194 aa6.11□□□□□ -1.43
USP39-219ENST00000496047 SLC5A6Q9Y289 635 aa6.11□□□□□ -1.43
USP39-219ENST00000496047 N6AMT1Q9Y5N5 214 aa6.11□□□□□ -1.43
USP39-219ENST00000496047 FLVCR1Q9Y5Y0 555 aa6.11□□□□□ -1.43
USP39-219ENST00000496047 TNRC6AQ8NDV7 1962 aaKnown RBP6.11□□□□□ -1.43
USP39-219ENST00000496047 HELZ2Q9BYK8 2649 aaKnown RBP6.11□□□□□ -1.43
USP39-219ENST00000496047 ZNF407Q9C0G0 2248 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 TRAV18A0A075B6X5 111 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 A0A0G2JMM0 328 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 TMEM272A0A1B0GTI8 110 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 A0A1B0GVC2 190 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 A0A1W2PPB8 328 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 A0A1W2PRS3 328 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 ANKRD20A5PA0PJZ0 165 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 UBE2QL1A1L167 161 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 OR6C6A6NF89 314 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 A6NIN4 97 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 ARGFXA6NJG6 315 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 DHRS7CA6NNS2 312 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 KIR3DP1A8MWS1 328 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 ZNF814B7Z6K7 855 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 ZNF587BE7ETH6 402 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 RER1O15258 196 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 SSNA1O43805 119 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 PEX14O75381 377 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 DHRS3O75911 302 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 SNAPC5O75971 98 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 CYB5AP00167 134 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 MT-ND4P03905 459 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 ALDOBP05062 364 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 LPLP06858 475 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 SP1P08047 785 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 ITGA5P08648 1049 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 ANXA3P12429 323 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 GTF2F2P13984 249 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 C4BPBP20851 252 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 CCL1P22362 96 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 CTSSP25774 331 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 GIFP27352 417 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 ZNF93P35789 620 aaPredicted RBP6.1□□□□□ -1.43
USP39-219ENST00000496047 CD96P40200 585 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 MAGEB1P43366 347 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 SELENOPP49908 381 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 CLDN15P56746 228 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 B3GALT5-AS1P59052 145 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 GALK2Q01415 458 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 MFAP5Q13361 173 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 KLF9Q13886 244 aaPredicted RBP6.1□□□□□ -1.43
USP39-219ENST00000496047 MEF2DQ14814 521 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 ZMYND11Q15326 602 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 RBMS2Q15434 407 aaKnown RBP6.1□□□□□ -1.43
USP39-219ENST00000496047 BCL2A1Q16548 175 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 GFOD2Q3B7J2 385 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 PCGF3Q3KNV8 242 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 SLC36A2Q495M3 483 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 PLA1AQ53H76 456 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 FAM27BQ5VT28 67 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 OTPQ5XKR4 325 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 CD276Q5ZPR3 534 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 SPINK14Q6IE38 97 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 DRAM2Q6UX65 266 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 NHLRC1Q6VVB1 395 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 ZNF782Q6ZMW2 699 aaPredicted RBP6.1□□□□□ -1.43
USP39-219ENST00000496047 LINC00696Q6ZRV3 163 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 SLC16A14Q7RTX9 510 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 DPPA2Q7Z7J5 298 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 GGNQ86UU5 652 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 WFDC8Q8IUA0 241 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 ZNF584Q8IVC4 421 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 SULF2Q8IWU5 870 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 ZNF101Q8IZC7 436 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 TCTE3Q8IZS6 198 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 LRRC18Q8N456 261 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 FAM109AQ8N4B1 249 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 DTX3Q8N9I9 347 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 SUMF1Q8NBK3 374 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 DEFB124Q8NES8 71 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 OR8B12Q8NGG6 310 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 OR1J2Q8NGS2 313 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 OR13C9Q8NGT0 318 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 OR52I2Q8NH67 350 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 OR51E1Q8TCB6 317 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 CCDC107Q8WV48 283 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 NKD1Q969G9 470 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 ITFG2Q969R8 447 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 UPRTQ96BW1 309 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 FAM71F1Q96KD3 344 aaPredicted RBP6.1□□□□□ -1.43
USP39-219ENST00000496047 TECTBQ96PL2 329 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 ZNF385AQ96PM9 386 aaKnown RBP6.1□□□□□ -1.43
USP39-219ENST00000496047 MDFIQ99750 246 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 TTTY12Q9BZ98 90 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 LINC00470Q9BZP3 86 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 CST11Q9H112 138 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 C20orf85Q9H1P6 137 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 RGCCQ9H4X1 137 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 RNF122Q9H9V4 155 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms