RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 NIPSNAP1Q9BPW8 284 aa10.66□□□□□ -0.7
PTPRF-214ENST00000496043 TOR3AQ9H497 397 aa10.66□□□□□ -0.7
PTPRF-214ENST00000496043 OPA3Q9H6K4 179 aa10.66□□□□□ -0.7
PTPRF-214ENST00000496043 MRPL15Q9P015 296 aaKnown RBP10.66□□□□□ -0.7
PTPRF-214ENST00000496043 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.65□□□□□ -0.7
PTPRF-214ENST00000496043 KIR2DS1A0A191URI9 304 aa10.65□□□□□ -0.7
PTPRF-214ENST00000496043 DHRS12A0PJE2 317 aa10.65□□□□□ -0.7
PTPRF-214ENST00000496043 ARRDC5A6NEK1 342 aa10.65□□□□□ -0.7
PTPRF-214ENST00000496043 APOC1P02654 83 aa10.65□□□□□ -0.7
PTPRF-214ENST00000496043 PPIAL4GP0DN37 164 aa10.65□□□□□ -0.7
PTPRF-214ENST00000496043 SLC2A1P11166 492 aa10.65□□□□□ -0.7
PTPRF-214ENST00000496043 PSKH1P11801 424 aa10.65□□□□□ -0.7
PTPRF-214ENST00000496043 PAICSP22234 425 aaKnown RBP10.65□□□□□ -0.7
PTPRF-214ENST00000496043 CFPP27918 469 aa10.65□□□□□ -0.7
PTPRF-214ENST00000496043 POU1F1P28069 291 aa10.65□□□□□ -0.7
PTPRF-214ENST00000496043 GSTT1P30711 240 aa10.65□□□□□ -0.7
PTPRF-214ENST00000496043 PITPNBP48739 271 aa10.65□□□□□ -0.7
PTPRF-214ENST00000496043 PAX2Q02962 417 aa10.65□□□□□ -0.7
PTPRF-214ENST00000496043 MPPED2Q15777 294 aa10.65□□□□□ -0.7
PTPRF-214ENST00000496043 KCNJ8Q15842 424 aa10.65□□□□□ -0.7
PTPRF-214ENST00000496043 KLF17Q5JT82 389 aaPredicted RBP10.65□□□□□ -0.7
PTPRF-214ENST00000496043 LINC01590Q5TEZ4 76 aa10.65□□□□□ -0.7
PTPRF-214ENST00000496043 LYPD2Q6UXB3 125 aa10.65□□□□□ -0.7
PTPRF-214ENST00000496043 DCDC5Q6ZRR9 648 aa10.65□□□□□ -0.7
PTPRF-214ENST00000496043 SPATC1Q76KD6 591 aa10.65□□□□□ -0.7
PTPRF-214ENST00000496043 DPY19L4Q7Z388 723 aa10.65□□□□□ -0.7
PTPRF-214ENST00000496043 ADGRG5Q8IZF4 528 aa10.65□□□□□ -0.7
PTPRF-214ENST00000496043 SIGLECL1Q8N7X8 197 aa10.65□□□□□ -0.7
PTPRF-214ENST00000496043 C3orf56Q8N813 242 aa10.65□□□□□ -0.7
PTPRF-214ENST00000496043 CANT1Q8WVQ1 401 aa10.65□□□□□ -0.7
PTPRF-214ENST00000496043 CCDC124Q96CT7 223 aaKnown RBP10.65□□□□□ -0.7
PTPRF-214ENST00000496043 INTS14Q96SY0 518 aa10.65□□□□□ -0.7
PTPRF-214ENST00000496043 MS4A7Q9GZW8 240 aaPredicted RBP10.65□□□□□ -0.7
PTPRF-214ENST00000496043 MED20Q9H944 212 aa10.65□□□□□ -0.7
PTPRF-214ENST00000496043 C14orf119Q9NWQ9 140 aa10.65□□□□□ -0.7
PTPRF-214ENST00000496043 PDP1Q9P0J1 537 aaPredicted RBP10.65□□□□□ -0.7
PTPRF-214ENST00000496043 CLN8Q9UBY8 286 aa10.65□□□□□ -0.7
PTPRF-214ENST00000496043 ZNF69Q9UC07 566 aa10.65□□□□□ -0.7
PTPRF-214ENST00000496043 IGHV2-70DA0A0C4DH43 119 aa10.64□□□□□ -0.71
PTPRF-214ENST00000496043 C5orf63A6NC05 138 aa10.64□□□□□ -0.71
PTPRF-214ENST00000496043 FAM183AA6NL82 134 aa10.64□□□□□ -0.71
PTPRF-214ENST00000496043 ANKRD30BLA7E2S9 258 aa10.64□□□□□ -0.71
PTPRF-214ENST00000496043 LGALS8O00214 317 aa10.64□□□□□ -0.71
PTPRF-214ENST00000496043 TBX1O43435 398 aa10.64□□□□□ -0.71
PTPRF-214ENST00000496043 NDUFA2O43678 99 aa10.64□□□□□ -0.71
PTPRF-214ENST00000496043 GLCEO94923 617 aa10.64□□□□□ -0.71
PTPRF-214ENST00000496043 PTBP3O95758 552 aaKnown RBP10.64□□□□□ -0.71
PTPRF-214ENST00000496043 HMGN1P05114 100 aa10.64□□□□□ -0.71
PTPRF-214ENST00000496043 ANXA2P07355 339 aaKnown RBP10.64□□□□□ -0.71
PTPRF-214ENST00000496043 GRPP07492 148 aa10.64□□□□□ -0.71
PTPRF-214ENST00000496043 HSD11B1P28845 292 aa10.64□□□□□ -0.71
PTPRF-214ENST00000496043 UBA52P62987 128 aaKnown RBP10.64□□□□□ -0.71
PTPRF-214ENST00000496043 GINS1Q14691 196 aa10.64□□□□□ -0.71
PTPRF-214ENST00000496043 CD276Q5ZPR3 534 aa10.64□□□□□ -0.71
PTPRF-214ENST00000496043 WDR25Q64LD2 544 aaPredicted RBP10.64□□□□□ -0.71
PTPRF-214ENST00000496043 RHOUQ7L0Q8 258 aa10.64□□□□□ -0.71
PTPRF-214ENST00000496043 DOK3Q7L591 496 aa10.64□□□□□ -0.71
PTPRF-214ENST00000496043 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.64□□□□□ -0.71
PTPRF-214ENST00000496043 ERI1Q8IV48 349 aaKnown RBP10.64□□□□□ -0.71
PTPRF-214ENST00000496043 BOLLQ8N9W6 283 aaKnown RBP10.64□□□□□ -0.71
PTPRF-214ENST00000496043 OR6N2Q8NGY6 317 aa10.64□□□□□ -0.71
PTPRF-214ENST00000496043 RNF133Q8WVZ7 376 aa10.64□□□□□ -0.71
PTPRF-214ENST00000496043 SPSB4Q96A44 273 aa10.64□□□□□ -0.71
PTPRF-214ENST00000496043 SGK3Q96BR1 496 aa10.64□□□□□ -0.71
PTPRF-214ENST00000496043 NUDT16L1Q9BRJ7 211 aaKnown RBP10.64□□□□□ -0.71
PTPRF-214ENST00000496043 ADAT1Q9BUB4 502 aaKnown RBP10.64□□□□□ -0.71
PTPRF-214ENST00000496043 ABHD6Q9BV23 337 aa10.64□□□□□ -0.71
PTPRF-214ENST00000496043 OR51V1Q9H2C8 321 aa10.64□□□□□ -0.71
PTPRF-214ENST00000496043 YY1AP1Q9H869 796 aa10.64□□□□□ -0.71
PTPRF-214ENST00000496043 ZNF556Q9HAH1 456 aa10.64□□□□□ -0.71
PTPRF-214ENST00000496043 ESM1Q9NQ30 184 aa10.64□□□□□ -0.71
PTPRF-214ENST00000496043 TRIM36Q9NQ86 728 aa10.64□□□□□ -0.71
PTPRF-214ENST00000496043 ERVK-18Q9QC07 812 aa10.64□□□□□ -0.71
PTPRF-214ENST00000496043 TRAV38-1A0A0B4J264 116 aa10.63□□□□□ -0.71
PTPRF-214ENST00000496043 PRR23D1E9PI22 279 aaPredicted RBP10.63□□□□□ -0.71
PTPRF-214ENST00000496043 PHYHO14832 338 aa10.63□□□□□ -0.71
PTPRF-214ENST00000496043 GYG2O15488 501 aa10.63□□□□□ -0.71
PTPRF-214ENST00000496043 PRR23D2P0DMB1 279 aaPredicted RBP10.63□□□□□ -0.71
PTPRF-214ENST00000496043 ANXA8P13928 327 aa10.63□□□□□ -0.71
PTPRF-214ENST00000496043 CFL1P23528 166 aaKnown RBP10.63□□□□□ -0.71
PTPRF-214ENST00000496043 PSMB10P40306 273 aa10.63□□□□□ -0.71
PTPRF-214ENST00000496043 MTNR1AP48039 350 aa10.63□□□□□ -0.71
PTPRF-214ENST00000496043 CX3CR1P49238 355 aa10.63□□□□□ -0.71
PTPRF-214ENST00000496043 NPY4RP50391 375 aa10.63□□□□□ -0.71
PTPRF-214ENST00000496043 BAMBIQ13145 260 aa10.63□□□□□ -0.71
PTPRF-214ENST00000496043 OR8B8Q15620 311 aa10.63□□□□□ -0.71
PTPRF-214ENST00000496043 TIGD6Q17RP2 521 aa10.63□□□□□ -0.71
PTPRF-214ENST00000496043 TUSC1Q2TAM9 212 aa10.63□□□□□ -0.71
PTPRF-214ENST00000496043 SFRP4Q6FHJ7 346 aaPredicted RBP10.63□□□□□ -0.71
PTPRF-214ENST00000496043 ZNF841Q6ZN19 808 aa10.63□□□□□ -0.71
PTPRF-214ENST00000496043 TMEM179BQ7Z7N9 219 aa10.63□□□□□ -0.71
PTPRF-214ENST00000496043 BCL6BQ8N143 479 aaPredicted RBP10.63□□□□□ -0.71
PTPRF-214ENST00000496043 IQCF1Q8N6M8 205 aa10.63□□□□□ -0.71
PTPRF-214ENST00000496043 C19orf18Q8NEA5 215 aa10.63□□□□□ -0.71
PTPRF-214ENST00000496043 OR56B2PQ8NGI1 322 aa10.63□□□□□ -0.71
PTPRF-214ENST00000496043 OR52H1Q8NGJ2 320 aa10.63□□□□□ -0.71
PTPRF-214ENST00000496043 OR8S1Q8NH09 359 aa10.63□□□□□ -0.71
PTPRF-214ENST00000496043 UPRTQ96BW1 309 aa10.63□□□□□ -0.71
PTPRF-214ENST00000496043 MARCH7Q9H992 704 aa10.63□□□□□ -0.71
PTPRF-214ENST00000496043 C1orf123Q9NWV4 160 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms