RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 SDK2Q58EX2 2172 aa12.21□□□□□ -0.46
VCP-207ENST00000493886 SLC17A2O00624 439 aa12.21□□□□□ -0.46
VCP-207ENST00000493886 CD3DP04234 171 aa12.21□□□□□ -0.46
VCP-207ENST00000493886 CSN2P05814 226 aa12.21□□□□□ -0.46
VCP-207ENST00000493886 LIPCP11150 499 aa12.21□□□□□ -0.46
VCP-207ENST00000493886 FSTP19883 344 aa12.21□□□□□ -0.46
VCP-207ENST00000493886 MRPS10P82664 201 aaKnown RBP12.21□□□□□ -0.46
VCP-207ENST00000493886 RAB11BQ15907 218 aa12.21□□□□□ -0.46
VCP-207ENST00000493886 ZNF468Q5VIY5 522 aaPredicted RBP12.21□□□□□ -0.46
VCP-207ENST00000493886 TMED4Q7Z7H5 227 aa12.21□□□□□ -0.46
VCP-207ENST00000493886 ARMC10Q8N2F6 343 aa12.21□□□□□ -0.46
VCP-207ENST00000493886 OR13C3Q8NGS6 347 aa12.21□□□□□ -0.46
VCP-207ENST00000493886 RBPMSQ93062 196 aaKnown RBP12.21□□□□□ -0.46
VCP-207ENST00000493886 C1orf198Q9H425 327 aa12.21□□□□□ -0.46
VCP-207ENST00000493886 SEC61A2Q9H9S3 476 aa12.21□□□□□ -0.46
VCP-207ENST00000493886 NIT2Q9NQR4 276 aa12.21□□□□□ -0.46
VCP-207ENST00000493886 LOC102725191A0A1B0GVB3 256 aa12.2□□□□□ -0.46
VCP-207ENST00000493886 LNP1A1A4G5 178 aa12.2□□□□□ -0.46
VCP-207ENST00000493886 GGT3PA6NGU5 568 aa12.2□□□□□ -0.46
VCP-207ENST00000493886 CTAG2O75638 210 aa12.2□□□□□ -0.46
VCP-207ENST00000493886 PMS2P2O95744 297 aa12.2□□□□□ -0.46
VCP-207ENST00000493886 GIPP09681 153 aaPredicted RBP12.2□□□□□ -0.46
VCP-207ENST00000493886 IGFBP3P17936 291 aaPredicted RBP12.2□□□□□ -0.46
VCP-207ENST00000493886 TCN2P20062 427 aa12.2□□□□□ -0.46
VCP-207ENST00000493886 MMP16P51512 607 aa12.2□□□□□ -0.46
VCP-207ENST00000493886 MFAP5Q13361 173 aa12.2□□□□□ -0.46
VCP-207ENST00000493886 ZNF169Q14929 603 aaPredicted RBP12.2□□□□□ -0.46
VCP-207ENST00000493886 PPA1Q15181 289 aa12.2□□□□□ -0.46
VCP-207ENST00000493886 ZNF528Q3MIS6 628 aa12.2□□□□□ -0.46
VCP-207ENST00000493886 RAET1LQ5VY80 246 aa12.2□□□□□ -0.46
VCP-207ENST00000493886 B3GNTL1Q67FW5 361 aaPredicted RBP12.2□□□□□ -0.46
VCP-207ENST00000493886 SLC25A47Q6Q0C1 308 aa12.2□□□□□ -0.46
VCP-207ENST00000493886 C6orf15Q6UXA7 325 aaPredicted RBP12.2□□□□□ -0.46
VCP-207ENST00000493886 MUC20Q8N307 709 aaPredicted RBP12.2□□□□□ -0.46
VCP-207ENST00000493886 C15orf40Q8WUR7 153 aa12.2□□□□□ -0.46
VCP-207ENST00000493886 STRADBQ9C0K7 418 aa12.2□□□□□ -0.46
VCP-207ENST00000493886 DKKL1Q9UK85 242 aa12.2□□□□□ -0.46
VCP-207ENST00000493886 LOC101059948A0A1B0GTJ6 334 aa12.2□□□□□ -0.46
VCP-207ENST00000493886 UBE2QL1A1L167 161 aa12.2□□□□□ -0.46
VCP-207ENST00000493886 ZNF726A6NNF4 738 aa12.2□□□□□ -0.46
VCP-207ENST00000493886 LGALS8O00214 317 aa12.2□□□□□ -0.46
VCP-207ENST00000493886 ZIC3O60481 467 aa12.2□□□□□ -0.46
VCP-207ENST00000493886 DNASE1L1P49184 302 aa12.2□□□□□ -0.46
VCP-207ENST00000493886 GNG10P50151 68 aa12.2□□□□□ -0.46
VCP-207ENST00000493886 TMEM244Q5VVB8 128 aa12.2□□□□□ -0.46
VCP-207ENST00000493886 GLT8D1Q68CQ7 371 aa12.2□□□□□ -0.46
VCP-207ENST00000493886 OR10K2Q6IF99 312 aa12.2□□□□□ -0.46
VCP-207ENST00000493886 FAM166AQ6J272 317 aa12.2□□□□□ -0.46
VCP-207ENST00000493886 RAB11FIP2Q7L804 512 aa12.2□□□□□ -0.46
VCP-207ENST00000493886 TIPARPQ7Z3E1 657 aaKnown RBP12.2□□□□□ -0.46
VCP-207ENST00000493886 OR10S1Q8NGN2 331 aa12.2□□□□□ -0.46
VCP-207ENST00000493886 CT55Q8WUE5 264 aa12.2□□□□□ -0.46
VCP-207ENST00000493886 FAM3DQ96BQ1 224 aa12.2□□□□□ -0.46
VCP-207ENST00000493886 ATG5Q9H1Y0 275 aa12.2□□□□□ -0.46
VCP-207ENST00000493886 CGGBP1Q9UFW8 167 aaPredicted RBP12.2□□□□□ -0.46
VCP-207ENST00000493886 POLR1DQ9Y2S0 133 aa12.2□□□□□ -0.46
VCP-207ENST00000493886 OR2M5A3KFT3 312 aa12.19□□□□□ -0.46
VCP-207ENST00000493886 MCRIP1C9JLW8 97 aa12.19□□□□□ -0.46
VCP-207ENST00000493886 M0QYG6 137 aa12.19□□□□□ -0.46
VCP-207ENST00000493886 GPR37O15354 613 aa12.19□□□□□ -0.46
VCP-207ENST00000493886 XRCC3O43542 346 aa12.19□□□□□ -0.46
VCP-207ENST00000493886 UBCP0CG48 685 aaKnown RBP12.19□□□□□ -0.46
VCP-207ENST00000493886 CDAP32320 146 aa12.19□□□□□ -0.46
VCP-207ENST00000493886 RAP2BP61225 183 aa12.19□□□□□ -0.46
VCP-207ENST00000493886 RBMS2Q15434 407 aaKnown RBP12.19□□□□□ -0.46
VCP-207ENST00000493886 SSX2Q16385 188 aa12.19□□□□□ -0.46
VCP-207ENST00000493886 SWI5Q1ZZU3 235 aa12.19□□□□□ -0.46
VCP-207ENST00000493886 C2orf76Q3KRA6 126 aa12.19□□□□□ -0.46
VCP-207ENST00000493886 KLHL24Q6TFL4 600 aa12.19□□□□□ -0.46
VCP-207ENST00000493886 ZNF627Q7L945 461 aa12.19□□□□□ -0.46
VCP-207ENST00000493886 EDARADDQ8WWZ3 215 aa12.19□□□□□ -0.46
VCP-207ENST00000493886 FAM206AQ9NX38 181 aa12.19□□□□□ -0.46
VCP-207ENST00000493886 GDF2Q9UK05 429 aaPredicted RBP12.19□□□□□ -0.46
VCP-207ENST00000493886 PCDHGA1Q9Y5H4 931 aa12.19□□□□□ -0.46
VCP-207ENST00000493886 LHFPL6Q9Y693 200 aa12.19□□□□□ -0.46
VCP-207ENST00000493886 LOC100509620A0A075B734 347 aa12.19□□□□□ -0.46
VCP-207ENST00000493886 H7C417 338 aa12.19□□□□□ -0.46
VCP-207ENST00000493886 P2RY10O00398 339 aa12.19□□□□□ -0.46
VCP-207ENST00000493886 ACAA1P09110 424 aaPredicted RBP12.19□□□□□ -0.46
VCP-207ENST00000493886 NDUFB7P17568 137 aa12.19□□□□□ -0.46
VCP-207ENST00000493886 H3F3AP84243 136 aa12.19□□□□□ -0.46
VCP-207ENST00000493886 Q0VFX4 171 aa12.19□□□□□ -0.46
VCP-207ENST00000493886 ANKRD16Q6P6B7 361 aa12.19□□□□□ -0.46
VCP-207ENST00000493886 C17orf107Q6ZR85 190 aa12.19□□□□□ -0.46
VCP-207ENST00000493886 EXO5Q9H790 373 aa12.19□□□□□ -0.46
VCP-207ENST00000493886 UFSP2Q9NUQ7 469 aa12.19□□□□□ -0.46
VCP-207ENST00000493886 SDHAF2Q9NX18 166 aa12.19□□□□□ -0.46
VCP-207ENST00000493886 MTFP1Q9UDX5 166 aa12.19□□□□□ -0.46
VCP-207ENST00000493886 OPN4Q9UHM6 478 aa12.19□□□□□ -0.46
VCP-207ENST00000493886 LOC100289279A0A1B0GTE1 492 aa12.18□□□□□ -0.46
VCP-207ENST00000493886 LOC390937A0A1W2PQ73 354 aa12.18□□□□□ -0.46
VCP-207ENST00000493886 DCDC2BA2VCK2 349 aa12.18□□□□□ -0.46
VCP-207ENST00000493886 SIGLEC5O15389 551 aa12.18□□□□□ -0.46
VCP-207ENST00000493886 SPDEFO95238 335 aa12.18□□□□□ -0.46
VCP-207ENST00000493886 QDPRP09417 244 aa12.18□□□□□ -0.46
VCP-207ENST00000493886 CLDN6P56747 220 aa12.18□□□□□ -0.46
VCP-207ENST00000493886 CLDN17P56750 224 aa12.18□□□□□ -0.46
VCP-207ENST00000493886 SEC61A1P61619 476 aaKnown RBP12.18□□□□□ -0.46
VCP-207ENST00000493886 HIST3H3Q16695 136 aa12.18□□□□□ -0.46
VCP-207ENST00000493886 SPICQ8N5J4 248 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms