RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 KCNJ15Q99712 375 aa11.35□□□□□ -0.59
COL6A3-211ENST00000491233 TRIM15Q9C019 465 aa11.35□□□□□ -0.59
COL6A3-211ENST00000491233 UNKLQ9H9P5 680 aaKnown RBP11.35□□□□□ -0.59
COL6A3-211ENST00000491233 CENPMQ9NSP4 180 aa11.35□□□□□ -0.59
COL6A3-211ENST00000491233 ARMC1Q9NVT9 282 aa11.35□□□□□ -0.59
COL6A3-211ENST00000491233 VNN3Q9NY84 501 aa11.35□□□□□ -0.59
COL6A3-211ENST00000491233 MRPL15Q9P015 296 aaKnown RBP11.35□□□□□ -0.59
COL6A3-211ENST00000491233 ACTR3BQ9P1U1 418 aa11.35□□□□□ -0.59
COL6A3-211ENST00000491233 N6AMT1Q9Y5N5 214 aa11.35□□□□□ -0.59
COL6A3-211ENST00000491233 TCRBV5S2A0A599 114 aa11.34□□□□□ -0.59
COL6A3-211ENST00000491233 ZNF878C9JN71 531 aa11.34□□□□□ -0.59
COL6A3-211ENST00000491233 ADAM20O43506 726 aa11.34□□□□□ -0.59
COL6A3-211ENST00000491233 WIPF1O43516 503 aa11.34□□□□□ -0.59
COL6A3-211ENST00000491233 GMDSO60547 372 aa11.34□□□□□ -0.59
COL6A3-211ENST00000491233 CLUP10909 449 aa11.34□□□□□ -0.59
COL6A3-211ENST00000491233 SPI1P17947 270 aa11.34□□□□□ -0.59
COL6A3-211ENST00000491233 FMO3P31513 532 aa11.34□□□□□ -0.59
COL6A3-211ENST00000491233 NPY4RP50391 375 aa11.34□□□□□ -0.59
COL6A3-211ENST00000491233 SLC25A1P53007 311 aa11.34□□□□□ -0.59
COL6A3-211ENST00000491233 OR8B8Q15620 311 aa11.34□□□□□ -0.59
COL6A3-211ENST00000491233 KCNJ8Q15842 424 aa11.34□□□□□ -0.59
COL6A3-211ENST00000491233 DEFB112Q30KQ8 113 aa11.34□□□□□ -0.59
COL6A3-211ENST00000491233 GPR157Q5UAW9 335 aa11.34□□□□□ -0.59
COL6A3-211ENST00000491233 RUSC1-AS1Q66K80 236 aa11.34□□□□□ -0.59
COL6A3-211ENST00000491233 ZNF826PQ6ZT77 177 aa11.34□□□□□ -0.59
COL6A3-211ENST00000491233 SPATC1Q76KD6 591 aa11.34□□□□□ -0.59
COL6A3-211ENST00000491233 OR6K6Q8NGW6 343 aa11.34□□□□□ -0.59
COL6A3-211ENST00000491233 PCGF1Q9BSM1 259 aa11.34□□□□□ -0.59
COL6A3-211ENST00000491233 NMNAT2Q9BZQ4 307 aa11.34□□□□□ -0.59
COL6A3-211ENST00000491233 SMURF1Q9HCE7 757 aa11.34□□□□□ -0.59
COL6A3-211ENST00000491233 C1orf123Q9NWV4 160 aa11.34□□□□□ -0.59
COL6A3-211ENST00000491233 ERVK-18Q9QC07 812 aa11.34□□□□□ -0.59
COL6A3-211ENST00000491233 BAIAP2Q9UQB8 552 aa11.34□□□□□ -0.59
COL6A3-211ENST00000491233 SAMHD1Q9Y3Z3 626 aaKnown RBP11.34□□□□□ -0.59
COL6A3-211ENST00000491233 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.33□□□□□ -0.6
COL6A3-211ENST00000491233 hCG_1807616A0A1W2PRN6 198 aa11.33□□□□□ -0.6
COL6A3-211ENST00000491233 OOEPA6NGQ2 149 aa11.33□□□□□ -0.6
COL6A3-211ENST00000491233 HOXA3O43365 443 aaPredicted RBP11.33□□□□□ -0.6
COL6A3-211ENST00000491233 TBX1O43435 398 aa11.33□□□□□ -0.6
COL6A3-211ENST00000491233 XRCC2O43543 280 aa11.33□□□□□ -0.6
COL6A3-211ENST00000491233 GRPP07492 148 aa11.33□□□□□ -0.6
COL6A3-211ENST00000491233 SFTPBP07988 381 aa11.33□□□□□ -0.6
COL6A3-211ENST00000491233 CFHR2P36980 270 aa11.33□□□□□ -0.6
COL6A3-211ENST00000491233 CX3CR1P49238 355 aa11.33□□□□□ -0.6
COL6A3-211ENST00000491233 IL13RA1P78552 427 aa11.33□□□□□ -0.6
COL6A3-211ENST00000491233 PCK2Q16822 640 aa11.33□□□□□ -0.6
COL6A3-211ENST00000491233 PRR31Q5SQ13 230 aa11.33□□□□□ -0.6
COL6A3-211ENST00000491233 LCN8Q6JVE9 175 aa11.33□□□□□ -0.6
COL6A3-211ENST00000491233 PIGWQ7Z7B1 504 aa11.33□□□□□ -0.6
COL6A3-211ENST00000491233 PLPP7Q8NBV4 271 aa11.33□□□□□ -0.6
COL6A3-211ENST00000491233 OR2T33Q8NG76 320 aa11.33□□□□□ -0.6
COL6A3-211ENST00000491233 ZDHHC16Q969W1 377 aa11.33□□□□□ -0.6
COL6A3-211ENST00000491233 OPA3Q9H6K4 179 aa11.33□□□□□ -0.6
COL6A3-211ENST00000491233 MAGIXQ9H6Y5 334 aa11.33□□□□□ -0.6
COL6A3-211ENST00000491233 REEP1Q9H902 201 aa11.33□□□□□ -0.6
COL6A3-211ENST00000491233 U3KQV3 271 aa11.33□□□□□ -0.6
COL6A3-211ENST00000491233 TRAV38-1A0A0B4J264 116 aa11.32□□□□□ -0.6
COL6A3-211ENST00000491233 DHRS12A0PJE2 317 aa11.32□□□□□ -0.6
COL6A3-211ENST00000491233 RIIAD1A6NNX1 92 aa11.32□□□□□ -0.6
COL6A3-211ENST00000491233 ZNF593O00488 134 aaPredicted RBP11.32□□□□□ -0.6
COL6A3-211ENST00000491233 IFNGP01579 166 aa11.32□□□□□ -0.6
COL6A3-211ENST00000491233 GYPAP02724 150 aa11.32□□□□□ -0.6
COL6A3-211ENST00000491233 ANXA2P07355 339 aaKnown RBP11.32□□□□□ -0.6
COL6A3-211ENST00000491233 ZNF3P17036 446 aa11.32□□□□□ -0.6
COL6A3-211ENST00000491233 MDKP21741 143 aaPredicted RBP11.32□□□□□ -0.6
COL6A3-211ENST00000491233 GRB2P62993 217 aaKnown RBP11.32□□□□□ -0.6
COL6A3-211ENST00000491233 EIF2B1Q14232 305 aaKnown RBP11.32□□□□□ -0.6
COL6A3-211ENST00000491233 TIGD6Q17RP2 521 aa11.32□□□□□ -0.6
COL6A3-211ENST00000491233 TEX30Q5JUR7 227 aa11.32□□□□□ -0.6
COL6A3-211ENST00000491233 LINC01590Q5TEZ4 76 aa11.32□□□□□ -0.6
COL6A3-211ENST00000491233 CD276Q5ZPR3 534 aa11.32□□□□□ -0.6
COL6A3-211ENST00000491233 OR2T5Q6IEZ7 315 aa11.32□□□□□ -0.6
COL6A3-211ENST00000491233 GCSAMQ8N6F7 178 aa11.32□□□□□ -0.6
COL6A3-211ENST00000491233 SPERTQ8NA61 448 aa11.32□□□□□ -0.6
COL6A3-211ENST00000491233 OR6N2Q8NGY6 317 aa11.32□□□□□ -0.6
COL6A3-211ENST00000491233 OR2T29Q8NH02 315 aa11.32□□□□□ -0.6
COL6A3-211ENST00000491233 SPSB4Q96A44 273 aa11.32□□□□□ -0.6
COL6A3-211ENST00000491233 TBX15Q96SF7 602 aa11.32□□□□□ -0.6
COL6A3-211ENST00000491233 DGCR6LQ9BY27 220 aa11.32□□□□□ -0.6
COL6A3-211ENST00000491233 MUC13Q9H3R2 512 aa11.32□□□□□ -0.6
COL6A3-211ENST00000491233 ZNF696Q9H7X3 374 aa11.32□□□□□ -0.6
COL6A3-211ENST00000491233 TRIM36Q9NQ86 728 aa11.32□□□□□ -0.6
COL6A3-211ENST00000491233 TNFRSF19Q9NS68 423 aa11.32□□□□□ -0.6
COL6A3-211ENST00000491233 C14orf119Q9NWQ9 140 aa11.32□□□□□ -0.6
COL6A3-211ENST00000491233 IGHV3OR15-7A0A075B7D8 119 aa11.31□□□□□ -0.6
COL6A3-211ENST00000491233 ANKRD30BLA7E2S9 258 aa11.31□□□□□ -0.6
COL6A3-211ENST00000491233 B2RBV5 119 aa11.31□□□□□ -0.6
COL6A3-211ENST00000491233 SRRM5B3KS81 715 aa11.31□□□□□ -0.6
COL6A3-211ENST00000491233 ZNF879B4DU55 563 aa11.31□□□□□ -0.6
COL6A3-211ENST00000491233 P2RY10O00398 339 aa11.31□□□□□ -0.6
COL6A3-211ENST00000491233 OMGP23515 440 aa11.31□□□□□ -0.6
COL6A3-211ENST00000491233 HSD11B1P28845 292 aa11.31□□□□□ -0.6
COL6A3-211ENST00000491233 MNAT1P51948 309 aa11.31□□□□□ -0.6
COL6A3-211ENST00000491233 BLVRAP53004 296 aa11.31□□□□□ -0.6
COL6A3-211ENST00000491233 MZT1Q08AG7 82 aa11.31□□□□□ -0.6
COL6A3-211ENST00000491233 MICAQ29983 383 aa11.31□□□□□ -0.6
COL6A3-211ENST00000491233 C16orf87Q6PH81 154 aa11.31□□□□□ -0.6
COL6A3-211ENST00000491233 SLC16A9Q7RTY1 509 aa11.31□□□□□ -0.6
COL6A3-211ENST00000491233 WDR86Q86TI4 376 aa11.31□□□□□ -0.6
COL6A3-211ENST00000491233 DHFR2Q86XF0 187 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms