RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 MRPL15Q9P015 296 aaKnown RBP13.42□□□□□ -0.26
CTDSP1-209ENST00000488627 ENOPH1Q9UHY7 261 aa13.42□□□□□ -0.26
CTDSP1-209ENST00000488627 E9PQ18 207 aa13.41□□□□□ -0.26
CTDSP1-209ENST00000488627 IFNL4K9M1U5 179 aa13.41□□□□□ -0.26
CTDSP1-209ENST00000488627 TBX1O43435 398 aa13.41□□□□□ -0.26
CTDSP1-209ENST00000488627 PLPP2O43688 288 aa13.41□□□□□ -0.26
CTDSP1-209ENST00000488627 PTBP3O95758 552 aaKnown RBP13.41□□□□□ -0.26
CTDSP1-209ENST00000488627 ALPLP05186 524 aa13.41□□□□□ -0.26
CTDSP1-209ENST00000488627 ANXA2P07355 339 aaKnown RBP13.41□□□□□ -0.26
CTDSP1-209ENST00000488627 MRPL3P09001 348 aaKnown RBP13.41□□□□□ -0.26
CTDSP1-209ENST00000488627 CD200P41217 278 aa13.41□□□□□ -0.26
CTDSP1-209ENST00000488627 BTG1P62324 171 aa13.41□□□□□ -0.26
CTDSP1-209ENST00000488627 TMEM155Q4W5P6 130 aa13.41□□□□□ -0.26
CTDSP1-209ENST00000488627 MOGAT3Q86VF5 341 aa13.41□□□□□ -0.26
CTDSP1-209ENST00000488627 RAB39BQ96DA2 213 aa13.41□□□□□ -0.26
CTDSP1-209ENST00000488627 REEP6Q96HR9 211 aa13.41□□□□□ -0.26
CTDSP1-209ENST00000488627 GAL3ST1Q99999 423 aa13.41□□□□□ -0.26
CTDSP1-209ENST00000488627 RBM4BQ9BQ04 359 aaKnown RBP13.41□□□□□ -0.26
CTDSP1-209ENST00000488627 SLC22A4Q9H015 551 aa13.41□□□□□ -0.26
CTDSP1-209ENST00000488627 SP140LQ9H930 580 aa13.41□□□□□ -0.26
CTDSP1-209ENST00000488627 HAO2Q9NYQ3 351 aa13.41□□□□□ -0.26
CTDSP1-209ENST00000488627 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.41□□□□□ -0.26
CTDSP1-209ENST00000488627 LAMP5Q9UJQ1 280 aa13.41□□□□□ -0.26
CTDSP1-209ENST00000488627 COPS3Q9UNS2 423 aa13.41□□□□□ -0.26
CTDSP1-209ENST00000488627 hCG_38984A0A1B0GV85 526 aa13.4□□□□□ -0.26
CTDSP1-209ENST00000488627 ISPDA4D126 451 aa13.4□□□□□ -0.26
CTDSP1-209ENST00000488627 GMDSO60547 372 aa13.4□□□□□ -0.26
CTDSP1-209ENST00000488627 ANPEPP15144 967 aa13.4□□□□□ -0.26
CTDSP1-209ENST00000488627 DDOSTP39656 456 aa13.4□□□□□ -0.26
CTDSP1-209ENST00000488627 ROM1Q03395 351 aa13.4□□□□□ -0.26
CTDSP1-209ENST00000488627 MPPED2Q15777 294 aa13.4□□□□□ -0.26
CTDSP1-209ENST00000488627 LCN1P1Q5VSP4 162 aa13.4□□□□□ -0.26
CTDSP1-209ENST00000488627 DEGS2Q6QHC5 323 aa13.4□□□□□ -0.26
CTDSP1-209ENST00000488627 GLCCI1Q86VQ1 547 aa13.4□□□□□ -0.26
CTDSP1-209ENST00000488627 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.4□□□□□ -0.26
CTDSP1-209ENST00000488627 OR51F2Q8NH61 342 aa13.4□□□□□ -0.26
CTDSP1-209ENST00000488627 Q8TCH9 128 aa13.4□□□□□ -0.26
CTDSP1-209ENST00000488627 OR10A2Q9H208 303 aa13.4□□□□□ -0.26
CTDSP1-209ENST00000488627 NIPAL2Q9H841 368 aa13.4□□□□□ -0.26
CTDSP1-209ENST00000488627 ADGRL4Q9HBW9 690 aa13.4□□□□□ -0.26
CTDSP1-209ENST00000488627 BRD7Q9NPI1 651 aa13.4□□□□□ -0.26
CTDSP1-209ENST00000488627 G6PC2Q9NQR9 355 aa13.4□□□□□ -0.26
CTDSP1-209ENST00000488627 UBAP1Q9NZ09 502 aa13.4□□□□□ -0.26
CTDSP1-209ENST00000488627 USE1Q9NZ43 259 aa13.4□□□□□ -0.26
CTDSP1-209ENST00000488627 LRP12Q9Y561 859 aa13.4□□□□□ -0.26
CTDSP1-209ENST00000488627 CUBNO60494 3623 aa13.39□□□□□ -0.27
CTDSP1-209ENST00000488627 TRAV20A0A0B4J274 112 aa13.39□□□□□ -0.27
CTDSP1-209ENST00000488627 PSMD9O00233 223 aa13.39□□□□□ -0.27
CTDSP1-209ENST00000488627 FSTL3O95633 263 aa13.39□□□□□ -0.27
CTDSP1-209ENST00000488627 CYB5R3P00387 301 aaPredicted RBP13.39□□□□□ -0.27
CTDSP1-209ENST00000488627 GSK3AP49840 483 aa13.39□□□□□ -0.27
CTDSP1-209ENST00000488627 PSMA6P60900 246 aaKnown RBP13.39□□□□□ -0.27
CTDSP1-209ENST00000488627 OR8G1Q15617 311 aa13.39□□□□□ -0.27
CTDSP1-209ENST00000488627 TIGD6Q17RP2 521 aa13.39□□□□□ -0.27
CTDSP1-209ENST00000488627 FAM201AQ5SY85 155 aa13.39□□□□□ -0.27
CTDSP1-209ENST00000488627 PRAMEF6Q5VXH4 476 aa13.39□□□□□ -0.27
CTDSP1-209ENST00000488627 ZNF771Q7L3S4 317 aaPredicted RBP13.39□□□□□ -0.27
CTDSP1-209ENST00000488627 KRT77Q7Z794 578 aa13.39□□□□□ -0.27
CTDSP1-209ENST00000488627 KLBQ86Z14 1044 aa13.39□□□□□ -0.27
CTDSP1-209ENST00000488627 RFLNBQ8N5W9 214 aa13.39□□□□□ -0.27
CTDSP1-209ENST00000488627 DVL3Q92997 716 aaPredicted RBP13.39□□□□□ -0.27
CTDSP1-209ENST00000488627 ERGIC1Q969X5 290 aa13.39□□□□□ -0.27
CTDSP1-209ENST00000488627 PGAM5Q96HS1 289 aa13.39□□□□□ -0.27
CTDSP1-209ENST00000488627 LYZL4Q96KX0 146 aa13.39□□□□□ -0.27
CTDSP1-209ENST00000488627 RIBC2Q9H4K1 309 aa13.39□□□□□ -0.27
CTDSP1-209ENST00000488627 RGCCQ9H4X1 137 aa13.39□□□□□ -0.27
CTDSP1-209ENST00000488627 PPP1R3EQ9H7J1 279 aa13.39□□□□□ -0.27
CTDSP1-209ENST00000488627 PATZ1Q9HBE1 687 aaKnown RBP13.39□□□□□ -0.27
CTDSP1-209ENST00000488627 TMEM165Q9HC07 324 aa13.39□□□□□ -0.27
CTDSP1-209ENST00000488627 S100A14Q9HCY8 104 aa13.39□□□□□ -0.27
CTDSP1-209ENST00000488627 H2AFY2Q9P0M6 372 aaPredicted RBP13.39□□□□□ -0.27
CTDSP1-209ENST00000488627 NOP16Q9Y3C1 178 aaKnown RBP13.39□□□□□ -0.27
CTDSP1-209ENST00000488627 SLC22A31A6NKX4 558 aa13.38□□□□□ -0.27
CTDSP1-209ENST00000488627 F5H0A9 414 aaPredicted RBP13.38□□□□□ -0.27
CTDSP1-209ENST00000488627 EI24O14681 340 aa13.38□□□□□ -0.27
CTDSP1-209ENST00000488627 ZNF205O95201 554 aa13.38□□□□□ -0.27
CTDSP1-209ENST00000488627 SRD5A1P18405 259 aa13.38□□□□□ -0.27
CTDSP1-209ENST00000488627 CFL1P23528 166 aaKnown RBP13.38□□□□□ -0.27
CTDSP1-209ENST00000488627 ZFP36P26651 326 aaKnown RBP13.38□□□□□ -0.27
CTDSP1-209ENST00000488627 DCTDP32321 178 aa13.38□□□□□ -0.27
CTDSP1-209ENST00000488627 MDH2P40926 338 aaKnown RBP13.38□□□□□ -0.27
CTDSP1-209ENST00000488627 OR8B8Q15620 311 aa13.38□□□□□ -0.27
CTDSP1-209ENST00000488627 C1orf229Q6ZS94 237 aaPredicted RBP13.38□□□□□ -0.27
CTDSP1-209ENST00000488627 C10orf67Q8IYJ2 551 aa13.38□□□□□ -0.27
CTDSP1-209ENST00000488627 ZNF679Q8IYX0 411 aa13.38□□□□□ -0.27
CTDSP1-209ENST00000488627 SPICQ8N5J4 248 aa13.38□□□□□ -0.27
CTDSP1-209ENST00000488627 PLPP7Q8NBV4 271 aa13.38□□□□□ -0.27
CTDSP1-209ENST00000488627 OR8B12Q8NGG6 310 aa13.38□□□□□ -0.27
CTDSP1-209ENST00000488627 OR8J1Q8NGP2 316 aa13.38□□□□□ -0.27
CTDSP1-209ENST00000488627 ASB17Q8WXJ9 295 aa13.38□□□□□ -0.27
CTDSP1-209ENST00000488627 UBE2FQ969M7 185 aa13.38□□□□□ -0.27
CTDSP1-209ENST00000488627 OR8B4Q96RC9 309 aa13.38□□□□□ -0.27
CTDSP1-209ENST00000488627 CNN2Q99439 309 aaKnown RBP13.38□□□□□ -0.27
CTDSP1-209ENST00000488627 MDFIQ99750 246 aa13.38□□□□□ -0.27
CTDSP1-209ENST00000488627 ADAT1Q9BUB4 502 aaKnown RBP13.38□□□□□ -0.27
CTDSP1-209ENST00000488627 UFSP2Q9NUQ7 469 aa13.38□□□□□ -0.27
CTDSP1-209ENST00000488627 FAM206AQ9NX38 181 aa13.38□□□□□ -0.27
CTDSP1-209ENST00000488627 RHBDD3Q9Y3P4 386 aa13.38□□□□□ -0.27
CTDSP1-209ENST00000488627 TMEM14AQ9Y6G1 99 aa13.38□□□□□ -0.27
CTDSP1-209ENST00000488627 FAM20BO75063 409 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms