RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 C1orf146Q5VVC0 180 aa14.89□□□□□ -0.03
ITGB1-215ENST00000488494 LIPNQ5VXI9 398 aa14.89□□□□□ -0.03
ITGB1-215ENST00000488494 FAHD1Q6P587 224 aa14.89□□□□□ -0.03
ITGB1-215ENST00000488494 FAM57BQ71RH2 274 aa14.89□□□□□ -0.03
ITGB1-215ENST00000488494 SHFQ7M4L6 423 aa14.89□□□□□ -0.03
ITGB1-215ENST00000488494 C1orf87Q8N0U7 546 aa14.89□□□□□ -0.03
ITGB1-215ENST00000488494 NRBF2Q96F24 287 aa14.89□□□□□ -0.03
ITGB1-215ENST00000488494 TEX12Q9BXU0 123 aa14.89□□□□□ -0.03
ITGB1-215ENST00000488494 SLC22A4Q9H015 551 aa14.89□□□□□ -0.03
ITGB1-215ENST00000488494 TOR3AQ9H497 397 aa14.89□□□□□ -0.03
ITGB1-215ENST00000488494 C7orf69Q9H7B7 122 aa14.89□□□□□ -0.03
ITGB1-215ENST00000488494 UFSP2Q9NUQ7 469 aa14.89□□□□□ -0.03
ITGB1-215ENST00000488494 MRPL15Q9P015 296 aaKnown RBP14.89□□□□□ -0.03
ITGB1-215ENST00000488494 FBN3Q75N90 2809 aa14.88□□□□□ -0.03
ITGB1-215ENST00000488494 A8MXK9 166 aa14.88□□□□□ -0.03
ITGB1-215ENST00000488494 RGS9O75916 674 aaPredicted RBP14.88□□□□□ -0.03
ITGB1-215ENST00000488494 H2BFMP0C1H6 154 aa14.88□□□□□ -0.03
ITGB1-215ENST00000488494 IRF2P14316 349 aa14.88□□□□□ -0.03
ITGB1-215ENST00000488494 SLC2A5P22732 501 aa14.88□□□□□ -0.03
ITGB1-215ENST00000488494 ZNF121P58317 390 aaPredicted RBP14.88□□□□□ -0.03
ITGB1-215ENST00000488494 MPPED2Q15777 294 aa14.88□□□□□ -0.03
ITGB1-215ENST00000488494 ATP6AP1Q15904 470 aa14.88□□□□□ -0.03
ITGB1-215ENST00000488494 TIGD6Q17RP2 521 aa14.88□□□□□ -0.03
ITGB1-215ENST00000488494 GFOD2Q3B7J2 385 aa14.88□□□□□ -0.03
ITGB1-215ENST00000488494 OR11L1Q8NGX0 322 aa14.88□□□□□ -0.03
ITGB1-215ENST00000488494 OTOSQ8NHW6 89 aa14.88□□□□□ -0.03
ITGB1-215ENST00000488494 Q8TCH9 128 aa14.88□□□□□ -0.03
ITGB1-215ENST00000488494 SPSB4Q96A44 273 aa14.88□□□□□ -0.03
ITGB1-215ENST00000488494 BRD7Q9NPI1 651 aa14.88□□□□□ -0.03
ITGB1-215ENST00000488494 MMP26Q9NRE1 261 aa14.88□□□□□ -0.03
ITGB1-215ENST00000488494 OPN4Q9UHM6 478 aa14.88□□□□□ -0.03
ITGB1-215ENST00000488494 KLHDC2Q9Y2U9 406 aa14.88□□□□□ -0.03
ITGB1-215ENST00000488494 GMDSO60547 372 aa14.87□□□□□ -0.03
ITGB1-215ENST00000488494 ATP5HO75947 161 aa14.87□□□□□ -0.03
ITGB1-215ENST00000488494 LYNP07948 512 aa14.87□□□□□ -0.03
ITGB1-215ENST00000488494 DAPP51397 102 aa14.87□□□□□ -0.03
ITGB1-215ENST00000488494 HOXA4Q00056 320 aaPredicted RBP14.87□□□□□ -0.03
ITGB1-215ENST00000488494 ZNF404Q494X3 552 aa14.87□□□□□ -0.03
ITGB1-215ENST00000488494 SLC16A9Q7RTY1 509 aa14.87□□□□□ -0.03
ITGB1-215ENST00000488494 PRSS45Q7RTY3 260 aa14.87□□□□□ -0.03
ITGB1-215ENST00000488494 PARP8Q8N3A8 854 aa14.87□□□□□ -0.03
ITGB1-215ENST00000488494 ZNF454Q8N9F8 522 aa14.87□□□□□ -0.03
ITGB1-215ENST00000488494 DEFB108BQ8NET1 73 aa14.87□□□□□ -0.03
ITGB1-215ENST00000488494 OR5K1Q8NHB7 308 aa14.87□□□□□ -0.03
ITGB1-215ENST00000488494 REEP6Q96HR9 211 aa14.87□□□□□ -0.03
ITGB1-215ENST00000488494 TMEM246Q9BRR3 403 aa14.87□□□□□ -0.03
ITGB1-215ENST00000488494 FN3KRPQ9HA64 309 aa14.87□□□□□ -0.03
ITGB1-215ENST00000488494 TMEM165Q9HC07 324 aa14.87□□□□□ -0.03
ITGB1-215ENST00000488494 TVP23BQ9NYZ1 205 aa14.87□□□□□ -0.03
ITGB1-215ENST00000488494 OR5V1Q9UGF6 321 aa14.87□□□□□ -0.03
ITGB1-215ENST00000488494 LRCH1Q9Y2L9 728 aa14.87□□□□□ -0.03
ITGB1-215ENST00000488494 ANK2Q01484 3957 aa14.86□□□□□ -0.03
ITGB1-215ENST00000488494 PPIAL4EA0A075B759 164 aa14.86□□□□□ -0.03
ITGB1-215ENST00000488494 PPIAL4CA0A0B4J2A2 164 aa14.86□□□□□ -0.03
ITGB1-215ENST00000488494 hCG_38984A0A1B0GV85 526 aa14.86□□□□□ -0.03
ITGB1-215ENST00000488494 PPIAL4DF5H284 164 aa14.86□□□□□ -0.03
ITGB1-215ENST00000488494 M0R129 80 aa14.86□□□□□ -0.03
ITGB1-215ENST00000488494 APOC1P02654 83 aa14.86□□□□□ -0.03
ITGB1-215ENST00000488494 PPIAL4FP0DN26 164 aa14.86□□□□□ -0.03
ITGB1-215ENST00000488494 CRISP1P54107 249 aa14.86□□□□□ -0.03
ITGB1-215ENST00000488494 APOFQ13790 326 aa14.86□□□□□ -0.03
ITGB1-215ENST00000488494 SNAPC1Q16533 368 aa14.86□□□□□ -0.03
ITGB1-215ENST00000488494 SLC35D3Q5M8T2 416 aa14.86□□□□□ -0.03
ITGB1-215ENST00000488494 KLBQ86Z14 1044 aa14.86□□□□□ -0.03
ITGB1-215ENST00000488494 C19orf18Q8NEA5 215 aa14.86□□□□□ -0.03
ITGB1-215ENST00000488494 THEM6Q8WUY1 208 aa14.86□□□□□ -0.03
ITGB1-215ENST00000488494 ERGIC1Q969X5 290 aa14.86□□□□□ -0.03
ITGB1-215ENST00000488494 SSBP3Q9BWW4 388 aaPredicted RBP14.86□□□□□ -0.03
ITGB1-215ENST00000488494 OR10A2Q9H208 303 aa14.86□□□□□ -0.03
ITGB1-215ENST00000488494 SP140LQ9H930 580 aa14.86□□□□□ -0.03
ITGB1-215ENST00000488494 KRT84Q9NSB2 600 aa14.86□□□□□ -0.03
ITGB1-215ENST00000488494 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.85□□□□□ -0.03
ITGB1-215ENST00000488494 ANKRD30BLA7E2S9 258 aa14.85□□□□□ -0.03
ITGB1-215ENST00000488494 TRAPPC2LH3BP13 241 aa14.85□□□□□ -0.03
ITGB1-215ENST00000488494 MITFO75030 526 aaPredicted RBP14.85□□□□□ -0.03
ITGB1-215ENST00000488494 MRPL3P09001 348 aaKnown RBP14.85□□□□□ -0.03
ITGB1-215ENST00000488494 WNT2P09544 360 aa14.85□□□□□ -0.03
ITGB1-215ENST00000488494 ZNF12P17014 697 aa14.85□□□□□ -0.03
ITGB1-215ENST00000488494 PSMA6P60900 246 aaKnown RBP14.85□□□□□ -0.03
ITGB1-215ENST00000488494 FAM3AP98173 230 aa14.85□□□□□ -0.03
ITGB1-215ENST00000488494 LRRN1Q6UXK5 716 aa14.85□□□□□ -0.03
ITGB1-215ENST00000488494 RHOUQ7L0Q8 258 aa14.85□□□□□ -0.03
ITGB1-215ENST00000488494 NLRC3Q7RTR2 1065 aa14.85□□□□□ -0.03
ITGB1-215ENST00000488494 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.85□□□□□ -0.03
ITGB1-215ENST00000488494 BOLLQ8N9W6 283 aaKnown RBP14.85□□□□□ -0.03
ITGB1-215ENST00000488494 SEMA6DQ8NFY4 1073 aa14.85□□□□□ -0.03
ITGB1-215ENST00000488494 OR52H1Q8NGJ2 320 aa14.85□□□□□ -0.03
ITGB1-215ENST00000488494 NANPQ8TBE9 248 aa14.85□□□□□ -0.03
ITGB1-215ENST00000488494 SGK3Q96BR1 496 aa14.85□□□□□ -0.03
ITGB1-215ENST00000488494 PGAM5Q96HS1 289 aa14.85□□□□□ -0.03
ITGB1-215ENST00000488494 MMADHCQ9H3L0 296 aaPredicted RBP14.85□□□□□ -0.03
ITGB1-215ENST00000488494 ZNF319Q9P2F9 582 aa14.85□□□□□ -0.03
ITGB1-215ENST00000488494 POLR3KQ9Y2Y1 108 aaPredicted RBP14.85□□□□□ -0.03
ITGB1-215ENST00000488494 PPIAL4AQ9Y536 164 aa14.85□□□□□ -0.03
ITGB1-215ENST00000488494 CCDC182A6NF36 153 aa14.84□□□□□ -0.03
ITGB1-215ENST00000488494 A6NLC8 198 aa14.84□□□□□ -0.03
ITGB1-215ENST00000488494 G3V2T6 193 aa14.84□□□□□ -0.03
ITGB1-215ENST00000488494 VENTXO95231 258 aa14.84□□□□□ -0.03
ITGB1-215ENST00000488494 FSTL3O95633 263 aa14.84□□□□□ -0.03
ITGB1-215ENST00000488494 PTBP3O95758 552 aaKnown RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms