RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 H3BSA7 217 aa14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 H7C1Q1 480 aa14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 J3QLW9 94 aa14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 J3QW42 95 aa14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 P2RY10O00398 339 aa14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 LMX1BO60663 402 aa14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 FAM20BO75063 409 aa14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 IGHA1P01876 353 aa14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 TTRP02766 147 aa14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 KRT8P05787 483 aa14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 LIMS3P0CW19 117 aa14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 LIMS4P0CW20 117 aa14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 ZNF19P17023 458 aa14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 CA6P23280 308 aa14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 KIR3DL2P43630 455 aa14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 GSK3AP49840 483 aa14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 ETV1P50549 477 aa14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 NANOS3P60323 173 aaKnown RBP14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 DEGS2Q6QHC5 323 aa14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 RHOUQ7L0Q8 258 aa14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 RDH10Q8IZV5 341 aa14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 ACBD7Q8N6N7 88 aa14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 SETD9Q8NE22 299 aa14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 BPIFB6Q8NFQ5 453 aa14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 OR51E1Q8TCB6 317 aa14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 UBASH3BQ8TF42 649 aa14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 SPRYD4Q8WW59 207 aaPredicted RBP14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 ITLN1Q8WWA0 313 aa14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 ELMOD3Q96FG2 381 aa14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 COG8Q96MW5 612 aa14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 MNTQ99583 582 aa14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 SMR3AQ99954 134 aa14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 SLC30A2Q9BRI3 323 aa14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 OR10A2Q9H208 303 aa14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 MRPS18AQ9NVS2 196 aaKnown RBP14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 OR52A1Q9UKL2 312 aa14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 RPL36Q9Y3U8 105 aaKnown RBP14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 R4GMQ9 66 aa14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 ITPR3Q14573 2671 aa14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 MAP1AP78559 2803 aaPredicted RBP14.55□□□□□ -0.08
SHROOM1-205ENST00000488072 A0A1B0GTI1 187 aa14.54□□□□□ -0.08
SHROOM1-205ENST00000488072 PLSCR5A0PG75 271 aa14.54□□□□□ -0.08
SHROOM1-205ENST00000488072 A6NIN4 97 aa14.54□□□□□ -0.08
SHROOM1-205ENST00000488072 LOC110117498-PIK3R3F6TDL0 507 aa14.54□□□□□ -0.08
SHROOM1-205ENST00000488072 PHYHO14832 338 aa14.54□□□□□ -0.08
SHROOM1-205ENST00000488072 WNT9BO14905 357 aa14.54□□□□□ -0.08
SHROOM1-205ENST00000488072 TPD52L2O43399 206 aaKnown RBP14.54□□□□□ -0.08
SHROOM1-205ENST00000488072 ZNF254O75437 659 aa14.54□□□□□ -0.08
SHROOM1-205ENST00000488072 IL18R1Q13478 541 aa14.54□□□□□ -0.08
SHROOM1-205ENST00000488072 CDONQ4KMG0 1287 aa14.54□□□□□ -0.08
SHROOM1-205ENST00000488072 WDR38Q5JTN6 314 aa14.54□□□□□ -0.08
SHROOM1-205ENST00000488072 SPNS3Q6ZMD2 512 aa14.54□□□□□ -0.08
SHROOM1-205ENST00000488072 CATSPERDQ86XM0 798 aa14.54□□□□□ -0.08
SHROOM1-205ENST00000488072 C1orf174Q8IYL3 243 aa14.54□□□□□ -0.08
SHROOM1-205ENST00000488072 C10orf105Q8TEF2 133 aa14.54□□□□□ -0.08
SHROOM1-205ENST00000488072 NEU4Q8WWR8 484 aaPredicted RBP14.54□□□□□ -0.08
SHROOM1-205ENST00000488072 FAM71F1Q96KD3 344 aaPredicted RBP14.54□□□□□ -0.08
SHROOM1-205ENST00000488072 C4orf36Q96KX1 117 aa14.54□□□□□ -0.08
SHROOM1-205ENST00000488072 ALG8Q9BVK2 526 aa14.54□□□□□ -0.08
SHROOM1-205ENST00000488072 FGF23Q9GZV9 251 aaPredicted RBP14.54□□□□□ -0.08
SHROOM1-205ENST00000488072 NIPAL2Q9H841 368 aa14.54□□□□□ -0.08
SHROOM1-205ENST00000488072 BARX1Q9HBU1 254 aaPredicted RBP14.54□□□□□ -0.08
SHROOM1-205ENST00000488072 GPR84Q9NQS5 396 aa14.54□□□□□ -0.08
SHROOM1-205ENST00000488072 ERVK13-1Q9NX77 482 aa14.54□□□□□ -0.08
SHROOM1-205ENST00000488072 RHBDD3Q9Y3P4 386 aa14.54□□□□□ -0.08
SHROOM1-205ENST00000488072 H0YJX3 145 aa14.53□□□□□ -0.08
SHROOM1-205ENST00000488072 XRCC2O43543 280 aa14.53□□□□□ -0.08
SHROOM1-205ENST00000488072 RP2O75695 350 aa14.53□□□□□ -0.08
SHROOM1-205ENST00000488072 TUBG1P23258 451 aa14.53□□□□□ -0.08
SHROOM1-205ENST00000488072 VHLP40337 213 aa14.53□□□□□ -0.08
SHROOM1-205ENST00000488072 PMELP40967 661 aa14.53□□□□□ -0.08
SHROOM1-205ENST00000488072 TNFAIP6P98066 277 aaPredicted RBP14.53□□□□□ -0.08
SHROOM1-205ENST00000488072 RAB40BQ12829 278 aa14.53□□□□□ -0.08
SHROOM1-205ENST00000488072 OR2G6Q5TZ20 316 aa14.53□□□□□ -0.08
SHROOM1-205ENST00000488072 PRAMEF6Q5VXH4 476 aa14.53□□□□□ -0.08
SHROOM1-205ENST00000488072 PRSS57Q6UWY2 283 aa14.53□□□□□ -0.08
SHROOM1-205ENST00000488072 ZNF420Q8TAQ5 688 aaPredicted RBP14.53□□□□□ -0.08
SHROOM1-205ENST00000488072 FGF20Q9NP95 211 aaPredicted RBP14.53□□□□□ -0.08
SHROOM1-205ENST00000488072 TUBG2Q9NRH3 451 aa14.53□□□□□ -0.08
SHROOM1-205ENST00000488072 NUFIP1Q9UHK0 495 aaKnown RBP14.53□□□□□ -0.08
SHROOM1-205ENST00000488072 GPR160Q9UJ42 338 aa14.53□□□□□ -0.08
SHROOM1-205ENST00000488072 A0A096LNT2 108 aa14.52□□□□□ -0.09
SHROOM1-205ENST00000488072 SNTNA6NMZ2 147 aa14.52□□□□□ -0.09
SHROOM1-205ENST00000488072 IGLV3-1P01715 115 aa14.52□□□□□ -0.09
SHROOM1-205ENST00000488072 APOC1P02654 83 aa14.52□□□□□ -0.09
SHROOM1-205ENST00000488072 PDLIM4P50479 330 aa14.52□□□□□ -0.09
SHROOM1-205ENST00000488072 MMP16P51512 607 aa14.52□□□□□ -0.09
SHROOM1-205ENST00000488072 GTF2A1P52655 376 aaPredicted RBP14.52□□□□□ -0.09
SHROOM1-205ENST00000488072 MAB21L1Q13394 359 aa14.52□□□□□ -0.09
SHROOM1-205ENST00000488072 MOGQ16653 247 aa14.52□□□□□ -0.09
SHROOM1-205ENST00000488072 ZNF829Q3KNS6 432 aaPredicted RBP14.52□□□□□ -0.09
SHROOM1-205ENST00000488072 AVPI1Q5T686 147 aa14.52□□□□□ -0.09
SHROOM1-205ENST00000488072 BCL2L15Q5TBC7 163 aa14.52□□□□□ -0.09
SHROOM1-205ENST00000488072 XAF1Q6GPH4 301 aa14.52□□□□□ -0.09
SHROOM1-205ENST00000488072 AHSA2Q719I0 299 aa14.52□□□□□ -0.09
SHROOM1-205ENST00000488072 ELMOD2Q8IZ81 293 aa14.52□□□□□ -0.09
SHROOM1-205ENST00000488072 OR52H1Q8NGJ2 320 aa14.52□□□□□ -0.09
SHROOM1-205ENST00000488072 FAM168AQ92567 244 aa14.52□□□□□ -0.09
SHROOM1-205ENST00000488072 PELI1Q96FA3 418 aa14.52□□□□□ -0.09
SHROOM1-205ENST00000488072 CNBD2Q96M20 576 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms