RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 FOXK1P85037 733 aa10.83□□□□□ -0.68
COL3A1-206ENST00000487010 PDZK1IP1Q13113 114 aa10.83□□□□□ -0.68
COL3A1-206ENST00000487010 PLAC9Q5JTB6 97 aa10.83□□□□□ -0.68
COL3A1-206ENST00000487010 RNF144BQ7Z419 303 aa10.83□□□□□ -0.68
COL3A1-206ENST00000487010 OR6S1Q8NH40 331 aa10.83□□□□□ -0.68
COL3A1-206ENST00000487010 C11orf40Q8WZ69 217 aa10.83□□□□□ -0.68
COL3A1-206ENST00000487010 CMSS1Q9BQ75 279 aaKnown RBP10.83□□□□□ -0.68
COL3A1-206ENST00000487010 SLC5A7Q9GZV3 580 aa10.83□□□□□ -0.68
COL3A1-206ENST00000487010 HRH4Q9H3N8 390 aa10.83□□□□□ -0.68
COL3A1-206ENST00000487010 REV3LO60673 3130 aa10.83□□□□□ -0.68
COL3A1-206ENST00000487010 SOCS1O15524 211 aa10.83□□□□□ -0.68
COL3A1-206ENST00000487010 FPR2P25090 351 aa10.83□□□□□ -0.68
COL3A1-206ENST00000487010 MEOX2P50222 304 aa10.83□□□□□ -0.68
COL3A1-206ENST00000487010 SUPT4H1P63272 117 aaKnown RBP10.83□□□□□ -0.68
COL3A1-206ENST00000487010 S100A12P80511 92 aa10.83□□□□□ -0.68
COL3A1-206ENST00000487010 HSF1Q00613 529 aa10.83□□□□□ -0.68
COL3A1-206ENST00000487010 ANKRD55Q3KP44 614 aa10.83□□□□□ -0.68
COL3A1-206ENST00000487010 FBXO46Q6PJ61 603 aaPredicted RBP10.83□□□□□ -0.68
COL3A1-206ENST00000487010 GLIPR1L1Q6UWM5 242 aa10.83□□□□□ -0.68
COL3A1-206ENST00000487010 H1FNTQ75WM6 255 aaPredicted RBP10.83□□□□□ -0.68
COL3A1-206ENST00000487010 SLC29A4Q7RTT9 530 aa10.83□□□□□ -0.68
COL3A1-206ENST00000487010 NAA40Q86UY6 237 aa10.83□□□□□ -0.68
COL3A1-206ENST00000487010 SKA3Q8IX90 412 aa10.83□□□□□ -0.68
COL3A1-206ENST00000487010 TMEM104Q8NE00 496 aa10.83□□□□□ -0.68
COL3A1-206ENST00000487010 NUBPLQ8TB37 319 aa10.83□□□□□ -0.68
COL3A1-206ENST00000487010 RAB3CQ96E17 227 aa10.83□□□□□ -0.68
COL3A1-206ENST00000487010 MICU1Q9BPX6 476 aa10.83□□□□□ -0.68
COL3A1-206ENST00000487010 RTBDNQ9BSG5 229 aaPredicted RBP10.83□□□□□ -0.68
COL3A1-206ENST00000487010 C8orf33Q9H7E9 229 aaPredicted RBP10.83□□□□□ -0.68
COL3A1-206ENST00000487010 MED29Q9NX70 200 aa10.83□□□□□ -0.68
COL3A1-206ENST00000487010 PRR13Q9NZ81 148 aa10.83□□□□□ -0.68
COL3A1-206ENST00000487010 SRPK3Q9UPE1 567 aa10.83□□□□□ -0.68
COL3A1-206ENST00000487010 UNC80Q8N2C7 3258 aa10.82□□□□□ -0.68
COL3A1-206ENST00000487010 PHF3Q92576 2039 aaKnown RBP10.82□□□□□ -0.68
COL3A1-206ENST00000487010 TLCD2A6NGC4 264 aa10.82□□□□□ -0.68
COL3A1-206ENST00000487010 NPIPB13A6NJU9 1138 aa10.82□□□□□ -0.68
COL3A1-206ENST00000487010 NPIPB4C9JG80 1138 aa10.82□□□□□ -0.68
COL3A1-206ENST00000487010 RNASEK-C17orf49H0YIS7 233 aa10.82□□□□□ -0.68
COL3A1-206ENST00000487010 ADAM10O14672 748 aa10.82□□□□□ -0.68
COL3A1-206ENST00000487010 FARS2O95363 451 aaKnown RBP10.82□□□□□ -0.68
COL3A1-206ENST00000487010 MPIG6BO95866 241 aa10.82□□□□□ -0.68
COL3A1-206ENST00000487010 CSTBP04080 98 aaKnown RBP10.82□□□□□ -0.68
COL3A1-206ENST00000487010 HIST1H1DP16402 221 aaKnown RBP10.82□□□□□ -0.68
COL3A1-206ENST00000487010 ZNF20P17024 532 aa10.82□□□□□ -0.68
COL3A1-206ENST00000487010 BCKDHBP21953 392 aa10.82□□□□□ -0.68
COL3A1-206ENST00000487010 KCNJ3P48549 501 aa10.82□□□□□ -0.68
COL3A1-206ENST00000487010 GPR85P60893 370 aa10.82□□□□□ -0.68
COL3A1-206ENST00000487010 POU3F1Q03052 451 aaPredicted RBP10.82□□□□□ -0.68
COL3A1-206ENST00000487010 C9orf50Q5SZB4 431 aa10.82□□□□□ -0.68
COL3A1-206ENST00000487010 PEG10Q86TG7 708 aaKnown RBP10.82□□□□□ -0.68
COL3A1-206ENST00000487010 TMEM200AQ86VY9 491 aa10.82□□□□□ -0.68
COL3A1-206ENST00000487010 ZNF441Q8N8Z8 693 aa10.82□□□□□ -0.68
COL3A1-206ENST00000487010 OR10H5Q8NGA6 315 aa10.82□□□□□ -0.68
COL3A1-206ENST00000487010 OR10S1Q8NGN2 331 aa10.82□□□□□ -0.68
COL3A1-206ENST00000487010 LILRB1Q8NHL6 650 aaPredicted RBP10.82□□□□□ -0.68
COL3A1-206ENST00000487010 MFSD8Q8NHS3 518 aa10.82□□□□□ -0.68
COL3A1-206ENST00000487010 TMEM234Q8WY98 164 aa10.82□□□□□ -0.68
COL3A1-206ENST00000487010 DAZLQ92904 295 aaKnown RBP10.82□□□□□ -0.68
COL3A1-206ENST00000487010 ZNF775Q96BV0 537 aaPredicted RBP10.82□□□□□ -0.68
COL3A1-206ENST00000487010 CPNE2Q96FN4 548 aaPredicted RBP10.82□□□□□ -0.68
COL3A1-206ENST00000487010 TMEM41AQ96HV5 264 aa10.82□□□□□ -0.68
COL3A1-206ENST00000487010 ARL5BQ96KC2 179 aa10.82□□□□□ -0.68
COL3A1-206ENST00000487010 OR10C1Q96KK4 312 aa10.82□□□□□ -0.68
COL3A1-206ENST00000487010 C2orf50Q96LR7 162 aa10.82□□□□□ -0.68
COL3A1-206ENST00000487010 C1orf147Q96MC9 270 aaPredicted RBP10.82□□□□□ -0.68
COL3A1-206ENST00000487010 SCGB3A2Q96PL1 93 aa10.82□□□□□ -0.68
COL3A1-206ENST00000487010 SPACA5Q96QH8 159 aa10.82□□□□□ -0.68
COL3A1-206ENST00000487010 OCSTAMPQ9BR26 566 aa10.82□□□□□ -0.68
COL3A1-206ENST00000487010 SLC26A1Q9H2B4 701 aa10.82□□□□□ -0.68
COL3A1-206ENST00000487010 UCK1Q9HA47 277 aa10.82□□□□□ -0.68
COL3A1-206ENST00000487010 OR2S2Q9NQN1 319 aa10.82□□□□□ -0.68
COL3A1-206ENST00000487010 DNAJB11Q9UBS4 358 aa10.82□□□□□ -0.68
COL3A1-206ENST00000487010 COPS7AQ9UBW8 275 aa10.82□□□□□ -0.68
COL3A1-206ENST00000487010 MRPS28Q9Y2Q9 187 aaKnown RBP10.82□□□□□ -0.68
COL3A1-206ENST00000487010 WIF1Q9Y5W5 379 aa10.82□□□□□ -0.68
COL3A1-206ENST00000487010 SLCO1B1Q9Y6L6 691 aa10.82□□□□□ -0.68
COL3A1-206ENST00000487010 PIAS3Q9Y6X2 628 aa10.82□□□□□ -0.68
COL3A1-206ENST00000487010 EPOPA6NHQ4 379 aa10.81□□□□□ -0.68
COL3A1-206ENST00000487010 LILRA5A6NI73 299 aa10.81□□□□□ -0.68
COL3A1-206ENST00000487010 CDC14BO60729 498 aa10.81□□□□□ -0.68
COL3A1-206ENST00000487010 RAD51DO75771 328 aa10.81□□□□□ -0.68
COL3A1-206ENST00000487010 APOC1P02654 83 aa10.81□□□□□ -0.68
COL3A1-206ENST00000487010 IFNA4P05014 189 aa10.81□□□□□ -0.68
COL3A1-206ENST00000487010 PI3P19957 117 aa10.81□□□□□ -0.68
COL3A1-206ENST00000487010 TMEM50BP56557 158 aa10.81□□□□□ -0.68
COL3A1-206ENST00000487010 HYAL1Q12794 435 aa10.81□□□□□ -0.68
COL3A1-206ENST00000487010 RAB32Q13637 225 aa10.81□□□□□ -0.68
COL3A1-206ENST00000487010 NSDHLQ15738 373 aa10.81□□□□□ -0.68
COL3A1-206ENST00000487010 OR5AS1Q8N127 324 aa10.81□□□□□ -0.68
COL3A1-206ENST00000487010 POC1AQ8NBT0 407 aa10.81□□□□□ -0.68
COL3A1-206ENST00000487010 OR1N1Q8NGS0 311 aa10.81□□□□□ -0.68
COL3A1-206ENST00000487010 KCNG3Q8TAE7 436 aa10.81□□□□□ -0.68
COL3A1-206ENST00000487010 OR51E1Q8TCB6 317 aa10.81□□□□□ -0.68
COL3A1-206ENST00000487010 C2CD4CQ8TF44 421 aa10.81□□□□□ -0.68
COL3A1-206ENST00000487010 KLHDC7BQ96G42 594 aa10.81□□□□□ -0.68
COL3A1-206ENST00000487010 SLC7A5P2Q9GIP4 190 aa10.81□□□□□ -0.68
COL3A1-206ENST00000487010 CHRNA10Q9GZZ6 450 aa10.81□□□□□ -0.68
COL3A1-206ENST00000487010 METTL8Q9H825 291 aaKnown RBP10.81□□□□□ -0.68
COL3A1-206ENST00000487010 DHCR7Q9UBM7 475 aaKnown RBP10.81□□□□□ -0.68
COL3A1-206ENST00000487010 PCDH15Q96QU1 1955 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms