RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 CD300LBA8K4G0 201 aa7.08□□□□□ -1.28
SF3A1-208ENST00000485618 C17orf100A8MU93 164 aa7.08□□□□□ -1.28
SF3A1-208ENST00000485618 J3QLW9 94 aa7.08□□□□□ -1.28
SF3A1-208ENST00000485618 GMDSO60547 372 aa7.08□□□□□ -1.28
SF3A1-208ENST00000485618 WBP4O75554 376 aaKnown RBP7.08□□□□□ -1.28
SF3A1-208ENST00000485618 CLIC3O95833 236 aa7.08□□□□□ -1.28
SF3A1-208ENST00000485618 SERPINA3P01011 423 aa7.08□□□□□ -1.28
SF3A1-208ENST00000485618 CCDC159P0C7I6 412 aa7.08□□□□□ -1.28
SF3A1-208ENST00000485618 PIPP12273 146 aaPredicted RBP7.08□□□□□ -1.28
SF3A1-208ENST00000485618 FOSL1P15407 271 aa7.08□□□□□ -1.28
SF3A1-208ENST00000485618 ZNF19P17023 458 aa7.08□□□□□ -1.28
SF3A1-208ENST00000485618 TNFRSF1AP19438 455 aa7.08□□□□□ -1.28
SF3A1-208ENST00000485618 MYF6P23409 242 aa7.08□□□□□ -1.28
SF3A1-208ENST00000485618 MAP2K3P46734 347 aa7.08□□□□□ -1.28
SF3A1-208ENST00000485618 SRP9P49458 86 aaKnown RBP7.08□□□□□ -1.28
SF3A1-208ENST00000485618 SLC3A1Q07837 685 aa7.08□□□□□ -1.28
SF3A1-208ENST00000485618 DBPQ10586 325 aaPredicted RBP7.08□□□□□ -1.28
SF3A1-208ENST00000485618 GK2Q14410 553 aaPredicted RBP7.08□□□□□ -1.28
SF3A1-208ENST00000485618 MST1LQ2TV78 715 aa7.08□□□□□ -1.28
SF3A1-208ENST00000485618 C6orf141Q5SZD1 244 aa7.08□□□□□ -1.28
SF3A1-208ENST00000485618 C11orf71Q6IPW1 123 aa7.08□□□□□ -1.28
SF3A1-208ENST00000485618 Q71RC1 249 aaPredicted RBP7.08□□□□□ -1.28
SF3A1-208ENST00000485618 PEG10Q86TG7 708 aaKnown RBP7.08□□□□□ -1.28
SF3A1-208ENST00000485618 KLHL36Q8N4N3 616 aa7.08□□□□□ -1.28
SF3A1-208ENST00000485618 BPIFB6Q8NFQ5 453 aa7.08□□□□□ -1.28
SF3A1-208ENST00000485618 OR8G5Q8NG78 346 aa7.08□□□□□ -1.28
SF3A1-208ENST00000485618 CNIH3Q8TBE1 160 aa7.08□□□□□ -1.28
SF3A1-208ENST00000485618 SPSB4Q96A44 273 aa7.08□□□□□ -1.28
SF3A1-208ENST00000485618 REEP6Q96HR9 211 aa7.08□□□□□ -1.28
SF3A1-208ENST00000485618 ALG8Q9BVK2 526 aa7.08□□□□□ -1.28
SF3A1-208ENST00000485618 JAM3Q9BX67 310 aa7.08□□□□□ -1.28
SF3A1-208ENST00000485618 PBOV1Q9GZY1 135 aa7.08□□□□□ -1.28
SF3A1-208ENST00000485618 OR52A1Q9UKL2 312 aa7.08□□□□□ -1.28
SF3A1-208ENST00000485618 DIMT1Q9UNQ2 313 aaKnown RBP7.08□□□□□ -1.28
SF3A1-208ENST00000485618 ERGIC3Q9Y282 383 aa7.08□□□□□ -1.28
SF3A1-208ENST00000485618 PCDHGB5Q9Y5G0 923 aa7.08□□□□□ -1.28
SF3A1-208ENST00000485618 PRRC2AP48634 2157 aaKnown RBP7.08□□□□□ -1.28
SF3A1-208ENST00000485618 A0A1B0GVI7 797 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 LOC390937A0A1W2PQ73 354 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 TMEM129A0AVI4 362 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 LRRC30A6NM36 301 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 ANXA2P2A6NMY6 339 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 IQCF6A8MYZ5 107 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 PTGES3LE9PB15 166 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 J3QRE1 110 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 NDUFS8O00217 210 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 SPRY3O43610 288 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 RPP14O95059 124 aaKnown RBP7.07□□□□□ -1.28
SF3A1-208ENST00000485618 APOL3O95236 402 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 CLPTM1O96005 669 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 IGHA1P01876 353 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 HEXAP06865 529 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 HTR1AP08908 422 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 GNAO1P09471 354 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 UBCP0CG48 685 aaKnown RBP7.07□□□□□ -1.28
SF3A1-208ENST00000485618 SLC2A1P11166 492 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 IRF2P14316 349 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 CDKN1AP38936 164 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 ALDH3B1P43353 468 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 PDLIM4P50479 330 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 CCR9P51686 369 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 TMEM33P57088 247 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 RIPPLY1Q0D2K3 151 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 ST3GAL4Q11206 333 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 HLXQ14774 488 aaPredicted RBP7.07□□□□□ -1.28
SF3A1-208ENST00000485618 GFOD2Q3B7J2 385 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 CDONQ4KMG0 1287 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 CCDC58Q4VC31 144 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 RBM48Q5RL73 367 aaKnown RBP7.07□□□□□ -1.28
SF3A1-208ENST00000485618 ZBTB37Q5TC79 503 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 TMEM244Q5VVB8 128 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 LIPNQ5VXI9 398 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 OR2T2Q6IF00 324 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 BIVMQ86UB2 503 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 LHFPL3Q86UP9 236 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 NAA40Q86UY6 237 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 CELF2-AS1Q8N7Q2 184 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 WFDC11Q8NEX6 87 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 OR2Z1Q8NG97 314 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 OR52I1Q8NGK6 324 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 OR8S1Q8NH09 359 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 UBASH3BQ8TF42 649 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 FBLIM1Q8WUP2 373 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 RDH5Q92781 318 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 HPS1Q92902 700 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 ERGIC1Q969X5 290 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 SGK3Q96BR1 496 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 ELMOD3Q96FG2 381 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 TIMD4Q96H15 378 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 CNBD2Q96M20 576 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 SIGLEC11Q96RL6 698 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 AMELYQ99218 206 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 YTHDF1Q9BYJ9 559 aaKnown RBP7.07□□□□□ -1.28
SF3A1-208ENST00000485618 SAP30LQ9HAJ7 183 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 C14orf119Q9NWQ9 140 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 ERVK13-1Q9NX77 482 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 NUFIP1Q9UHK0 495 aaKnown RBP7.07□□□□□ -1.28
SF3A1-208ENST00000485618 MRM2Q9UI43 246 aaKnown RBP7.07□□□□□ -1.28
SF3A1-208ENST00000485618 PSORS1C1Q9UIG5 152 aa7.07□□□□□ -1.28
SF3A1-208ENST00000485618 COPS3Q9UNS2 423 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms