RNA–Protein interactions for RNA: ENST00000484528.1

USP40-215, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 933 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-215ENST00000484528 SAMHD1Q9Y3Z3 626 aaKnown RBP17.95■□□□□ 0.46
USP40-215ENST00000484528 B2RBV5 119 aa17.94■□□□□ 0.46
USP40-215ENST00000484528 ZNF593O00488 134 aaPredicted RBP17.94■□□□□ 0.46
USP40-215ENST00000484528 RNASE1P07998 156 aaKnown RBP17.94■□□□□ 0.46
USP40-215ENST00000484528 MTNR1AP48039 350 aa17.94■□□□□ 0.46
USP40-215ENST00000484528 ZNF826PQ6ZT77 177 aa17.94■□□□□ 0.46
USP40-215ENST00000484528 SLC25A28Q96A46 364 aa17.94■□□□□ 0.46
USP40-215ENST00000484528 KCNJ15Q99712 375 aa17.94■□□□□ 0.46
USP40-215ENST00000484528 NMNAT2Q9BZQ4 307 aa17.94■□□□□ 0.46
USP40-215ENST00000484528 SLC22A4Q9H015 551 aa17.94■□□□□ 0.46
USP40-215ENST00000484528 C1orf123Q9NWV4 160 aa17.94■□□□□ 0.46
USP40-215ENST00000484528 NOP16Q9Y3C1 178 aaKnown RBP17.94■□□□□ 0.46
USP40-215ENST00000484528 A6NLC8 198 aa17.93■□□□□ 0.46
USP40-215ENST00000484528 LGALS8O00214 317 aa17.93■□□□□ 0.46
USP40-215ENST00000484528 TBX1O43435 398 aa17.93■□□□□ 0.46
USP40-215ENST00000484528 GRPP07492 148 aa17.93■□□□□ 0.46
USP40-215ENST00000484528 PSMB10P40306 273 aa17.93■□□□□ 0.46
USP40-215ENST00000484528 OR8B8Q15620 311 aa17.93■□□□□ 0.46
USP40-215ENST00000484528 C9orf139Q6ZV77 190 aa17.93■□□□□ 0.46
USP40-215ENST00000484528 OR2T33Q8NG76 320 aa17.93■□□□□ 0.46
USP40-215ENST00000484528 ZNF747Q9BV97 191 aa17.93■□□□□ 0.46
USP40-215ENST00000484528 REEP1Q9H902 201 aa17.93■□□□□ 0.46
USP40-215ENST00000484528 MED20Q9H944 212 aa17.93■□□□□ 0.46
USP40-215ENST00000484528 MRPL15Q9P015 296 aaKnown RBP17.93■□□□□ 0.46
USP40-215ENST00000484528 ZNF878C9JN71 531 aa17.92■□□□□ 0.46
USP40-215ENST00000484528 ADAM20O43506 726 aa17.92■□□□□ 0.46
USP40-215ENST00000484528 ENSAO43768 121 aaKnown RBP17.92■□□□□ 0.46
USP40-215ENST00000484528 GMDSO60547 372 aa17.92■□□□□ 0.46
USP40-215ENST00000484528 PTBP3O95758 552 aaKnown RBP17.92■□□□□ 0.46
USP40-215ENST00000484528 PCK2Q16822 640 aa17.92■□□□□ 0.46
USP40-215ENST00000484528 MICAQ29983 383 aa17.92■□□□□ 0.46
USP40-215ENST00000484528 OR2T5Q6IEZ7 315 aa17.92■□□□□ 0.46
USP40-215ENST00000484528 LCN8Q6JVE9 175 aa17.92■□□□□ 0.46
USP40-215ENST00000484528 DHFR2Q86XF0 187 aa17.92■□□□□ 0.46
USP40-215ENST00000484528 IQCF1Q8N6M8 205 aa17.92■□□□□ 0.46
USP40-215ENST00000484528 OR2T29Q8NH02 315 aa17.92■□□□□ 0.46
USP40-215ENST00000484528 PCGF1Q9BSM1 259 aa17.92■□□□□ 0.46
USP40-215ENST00000484528 RASSF4Q9H2L5 321 aa17.92■□□□□ 0.46
USP40-215ENST00000484528 MAGIXQ9H6Y5 334 aa17.92■□□□□ 0.46
USP40-215ENST00000484528 SMURF1Q9HCE7 757 aa17.92■□□□□ 0.46
USP40-215ENST00000484528 BAIAP2Q9UQB8 552 aa17.92■□□□□ 0.46
USP40-215ENST00000484528 hCG_1807616A0A1W2PRN6 198 aa17.91■□□□□ 0.46
USP40-215ENST00000484528 DHRS12A0PJE2 317 aa17.91■□□□□ 0.46
USP40-215ENST00000484528 FAM183AA6NL82 134 aa17.91■□□□□ 0.46
USP40-215ENST00000484528 RIIAD1A6NNX1 92 aa17.91■□□□□ 0.46
USP40-215ENST00000484528 TMPRSS2O15393 492 aa17.91■□□□□ 0.46
USP40-215ENST00000484528 IFNGP01579 166 aa17.91■□□□□ 0.46
USP40-215ENST00000484528 ANXA2P07355 339 aaKnown RBP17.91■□□□□ 0.46
USP40-215ENST00000484528 SFTPBP07988 381 aa17.91■□□□□ 0.46
USP40-215ENST00000484528 CX3CR1P49238 355 aa17.91■□□□□ 0.46
USP40-215ENST00000484528 MNAT1P51948 309 aa17.91■□□□□ 0.46
USP40-215ENST00000484528 SLC25A1P53007 311 aa17.91■□□□□ 0.46
USP40-215ENST00000484528 MS4A2Q01362 244 aa17.91■□□□□ 0.46
USP40-215ENST00000484528 EIF2B1Q14232 305 aaKnown RBP17.91■□□□□ 0.46
USP40-215ENST00000484528 DEFB112Q30KQ8 113 aa17.91■□□□□ 0.46
USP40-215ENST00000484528 RUSC1-AS1Q66K80 236 aa17.91■□□□□ 0.46
USP40-215ENST00000484528 OR6N2Q8NGY6 317 aa17.91■□□□□ 0.46
USP40-215ENST00000484528 OTULINQ96BN8 352 aa17.91■□□□□ 0.46
USP40-215ENST00000484528 DGCR6LQ9BY27 220 aa17.91■□□□□ 0.46
USP40-215ENST00000484528 UNKLQ9H9P5 680 aaKnown RBP17.91■□□□□ 0.46
USP40-215ENST00000484528 TNFRSF19Q9NS68 423 aa17.91■□□□□ 0.46
USP40-215ENST00000484528 ERVK-18Q9QC07 812 aa17.91■□□□□ 0.46
USP40-215ENST00000484528 IGHV3OR15-7A0A075B7D8 119 aa17.9■□□□□ 0.46
USP40-215ENST00000484528 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.9■□□□□ 0.46
USP40-215ENST00000484528 OOEPA6NGQ2 149 aa17.9■□□□□ 0.46
USP40-215ENST00000484528 CLDN34H7C241 214 aa17.9■□□□□ 0.46
USP40-215ENST00000484528 HOXA3O43365 443 aaPredicted RBP17.9■□□□□ 0.46
USP40-215ENST00000484528 XRCC2O43543 280 aa17.9■□□□□ 0.46
USP40-215ENST00000484528 GYPAP02724 150 aa17.9■□□□□ 0.46
USP40-215ENST00000484528 POU4F2Q12837 409 aa17.9■□□□□ 0.46
USP40-215ENST00000484528 FAM98BQ52LJ0 330 aaKnown RBP17.9■□□□□ 0.46
USP40-215ENST00000484528 TEX30Q5JUR7 227 aa17.9■□□□□ 0.46
USP40-215ENST00000484528 LINC01590Q5TEZ4 76 aa17.9■□□□□ 0.46
USP40-215ENST00000484528 GPR157Q5UAW9 335 aa17.9■□□□□ 0.46
USP40-215ENST00000484528 SHISA2Q6UWI4 295 aa17.9■□□□□ 0.46
USP40-215ENST00000484528 ERI1Q8IV48 349 aaKnown RBP17.9■□□□□ 0.46
USP40-215ENST00000484528 OR10G2Q8NGC3 310 aa17.9■□□□□ 0.46
USP40-215ENST00000484528 ZDHHC16Q969W1 377 aa17.9■□□□□ 0.46
USP40-215ENST00000484528 CCDC124Q96CT7 223 aaKnown RBP17.9■□□□□ 0.46
USP40-215ENST00000484528 NIPSNAP1Q9BPW8 284 aa17.9■□□□□ 0.46
USP40-215ENST00000484528 DNAJC27Q9NZQ0 273 aa17.9■□□□□ 0.46
USP40-215ENST00000484528 MEGF8Q7Z7M0 2845 aa17.9■□□□□ 0.46
USP40-215ENST00000484528 ZNF3P17036 446 aa17.89■□□□□ 0.45
USP40-215ENST00000484528 OMGP23515 440 aa17.89■□□□□ 0.45
USP40-215ENST00000484528 HSD11B1P28845 292 aa17.89■□□□□ 0.45
USP40-215ENST00000484528 NPY4RP50391 375 aa17.89■□□□□ 0.45
USP40-215ENST00000484528 TRIM25Q14258 630 aaKnown RBP17.89■□□□□ 0.45
USP40-215ENST00000484528 KCNJ8Q15842 424 aa17.89■□□□□ 0.45
USP40-215ENST00000484528 TIGD6Q17RP2 521 aa17.89■□□□□ 0.45
USP40-215ENST00000484528 GFOD2Q3B7J2 385 aa17.89■□□□□ 0.45
USP40-215ENST00000484528 SLC16A9Q7RTY1 509 aa17.89■□□□□ 0.45
USP40-215ENST00000484528 DPY19L4Q7Z388 723 aa17.89■□□□□ 0.45
USP40-215ENST00000484528 FAM90A1Q86YD7 464 aa17.89■□□□□ 0.45
USP40-215ENST00000484528 GCSAMQ8N6F7 178 aa17.89■□□□□ 0.45
USP40-215ENST00000484528 OR8S1Q8NH09 359 aa17.89■□□□□ 0.45
USP40-215ENST00000484528 TEX47Q8TBZ9 253 aa17.89■□□□□ 0.45
USP40-215ENST00000484528 NSL1Q96IY1 281 aa17.89■□□□□ 0.45
USP40-215ENST00000484528 AMELYQ99218 206 aa17.89■□□□□ 0.45
USP40-215ENST00000484528 MUC13Q9H3R2 512 aa17.89■□□□□ 0.45
USP40-215ENST00000484528 OPA3Q9H6K4 179 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms