RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 TTTY10Q9BZA0 68 aa13.15□□□□□ -0.3
HMGA1-206ENST00000478214 OR10A2Q9H208 303 aa13.15□□□□□ -0.3
HMGA1-206ENST00000478214 OPA3Q9H6K4 179 aa13.15□□□□□ -0.3
HMGA1-206ENST00000478214 ZNF665Q9H7R5 613 aa13.15□□□□□ -0.3
HMGA1-206ENST00000478214 LPAR2Q9HBW0 351 aa13.15□□□□□ -0.3
HMGA1-206ENST00000478214 LRP12Q9Y561 859 aa13.15□□□□□ -0.3
HMGA1-206ENST00000478214 ORC6Q9Y5N6 252 aa13.15□□□□□ -0.3
HMGA1-206ENST00000478214 NPTNQ9Y639 398 aa13.15□□□□□ -0.3
HMGA1-206ENST00000478214 B4DSR2 109 aa13.14□□□□□ -0.31
HMGA1-206ENST00000478214 PSMA6P60900 246 aaKnown RBP13.14□□□□□ -0.31
HMGA1-206ENST00000478214 FAM3AP98173 230 aa13.14□□□□□ -0.31
HMGA1-206ENST00000478214 OR8G1Q15617 311 aa13.14□□□□□ -0.31
HMGA1-206ENST00000478214 KCTD18Q6PI47 426 aaPredicted RBP13.14□□□□□ -0.31
HMGA1-206ENST00000478214 MOGAT3Q86VF5 341 aa13.14□□□□□ -0.31
HMGA1-206ENST00000478214 RFLNBQ8N5W9 214 aa13.14□□□□□ -0.31
HMGA1-206ENST00000478214 OR8J1Q8NGP2 316 aa13.14□□□□□ -0.31
HMGA1-206ENST00000478214 DVL3Q92997 716 aaPredicted RBP13.14□□□□□ -0.31
HMGA1-206ENST00000478214 UBE2FQ969M7 185 aa13.14□□□□□ -0.31
HMGA1-206ENST00000478214 SIGLEC11Q96RL6 698 aa13.14□□□□□ -0.31
HMGA1-206ENST00000478214 SLC29A1Q99808 456 aa13.14□□□□□ -0.31
HMGA1-206ENST00000478214 GAL3ST1Q99999 423 aa13.14□□□□□ -0.31
HMGA1-206ENST00000478214 SLC22A4Q9H015 551 aa13.14□□□□□ -0.31
HMGA1-206ENST00000478214 NIPAL2Q9H841 368 aa13.14□□□□□ -0.31
HMGA1-206ENST00000478214 ADGRL4Q9HBW9 690 aa13.14□□□□□ -0.31
HMGA1-206ENST00000478214 TMEM160Q9NX00 188 aa13.14□□□□□ -0.31
HMGA1-206ENST00000478214 TMEM14AQ9Y6G1 99 aa13.14□□□□□ -0.31
HMGA1-206ENST00000478214 hCG_38984A0A1B0GV85 526 aa13.13□□□□□ -0.31
HMGA1-206ENST00000478214 TMEM178BH3BS89 294 aa13.13□□□□□ -0.31
HMGA1-206ENST00000478214 IGHV2-70P01814 119 aa13.13□□□□□ -0.31
HMGA1-206ENST00000478214 IGHV2-5P01817 119 aa13.13□□□□□ -0.31
HMGA1-206ENST00000478214 SBK2P0C263 348 aa13.13□□□□□ -0.31
HMGA1-206ENST00000478214 DDOSTP39656 456 aa13.13□□□□□ -0.31
HMGA1-206ENST00000478214 PMELP40967 661 aa13.13□□□□□ -0.31
HMGA1-206ENST00000478214 CD200P41217 278 aa13.13□□□□□ -0.31
HMGA1-206ENST00000478214 GSK3AP49840 483 aa13.13□□□□□ -0.31
HMGA1-206ENST00000478214 RAD23AP54725 363 aa13.13□□□□□ -0.31
HMGA1-206ENST00000478214 CDC42P60953 191 aa13.13□□□□□ -0.31
HMGA1-206ENST00000478214 ROM1Q03395 351 aa13.13□□□□□ -0.31
HMGA1-206ENST00000478214 CHRFAM7AQ494W8 412 aa13.13□□□□□ -0.31
HMGA1-206ENST00000478214 PRAMEF6Q5VXH4 476 aa13.13□□□□□ -0.31
HMGA1-206ENST00000478214 DEGS2Q6QHC5 323 aa13.13□□□□□ -0.31
HMGA1-206ENST00000478214 PRIMA1Q86XR5 153 aa13.13□□□□□ -0.31
HMGA1-206ENST00000478214 SLC35F2Q8IXU6 374 aa13.13□□□□□ -0.31
HMGA1-206ENST00000478214 OR51G2Q8NGK0 314 aa13.13□□□□□ -0.31
HMGA1-206ENST00000478214 FAM81AQ8TBF8 368 aa13.13□□□□□ -0.31
HMGA1-206ENST00000478214 ASB17Q8WXJ9 295 aa13.13□□□□□ -0.31
HMGA1-206ENST00000478214 EME1Q96AY2 570 aa13.13□□□□□ -0.31
HMGA1-206ENST00000478214 OR8B4Q96RC9 309 aa13.13□□□□□ -0.31
HMGA1-206ENST00000478214 MBOAT4Q96T53 435 aa13.13□□□□□ -0.31
HMGA1-206ENST00000478214 ADAT1Q9BUB4 502 aaKnown RBP13.13□□□□□ -0.31
HMGA1-206ENST00000478214 C9orf16Q9BUW7 83 aa13.13□□□□□ -0.31
HMGA1-206ENST00000478214 HAO2Q9NYQ3 351 aa13.13□□□□□ -0.31
HMGA1-206ENST00000478214 UBAP1Q9NZ09 502 aa13.13□□□□□ -0.31
HMGA1-206ENST00000478214 MRPL15Q9P015 296 aaKnown RBP13.13□□□□□ -0.31
HMGA1-206ENST00000478214 WARS2Q9UGM6 360 aaKnown RBP13.13□□□□□ -0.31
HMGA1-206ENST00000478214 CDC42EP3Q9UKI2 254 aa13.13□□□□□ -0.31
HMGA1-206ENST00000478214 E9PQ18 207 aa13.12□□□□□ -0.31
HMGA1-206ENST00000478214 MAGEB4O15481 346 aaPredicted RBP13.12□□□□□ -0.31
HMGA1-206ENST00000478214 GMDSO60547 372 aa13.12□□□□□ -0.31
HMGA1-206ENST00000478214 ZNF205O95201 554 aa13.12□□□□□ -0.31
HMGA1-206ENST00000478214 APOL3O95236 402 aa13.12□□□□□ -0.31
HMGA1-206ENST00000478214 BAG2O95816 211 aa13.12□□□□□ -0.31
HMGA1-206ENST00000478214 CYB5R3P00387 301 aaPredicted RBP13.12□□□□□ -0.31
HMGA1-206ENST00000478214 MSMBP08118 114 aa13.12□□□□□ -0.31
HMGA1-206ENST00000478214 CFL1P23528 166 aaKnown RBP13.12□□□□□ -0.31
HMGA1-206ENST00000478214 HTR1FP30939 366 aa13.12□□□□□ -0.31
HMGA1-206ENST00000478214 GATA4P43694 442 aa13.12□□□□□ -0.31
HMGA1-206ENST00000478214 DVL1P1P54792 670 aaPredicted RBP13.12□□□□□ -0.31
HMGA1-206ENST00000478214 CXCR4P61073 352 aa13.12□□□□□ -0.31
HMGA1-206ENST00000478214 ZMYND11Q15326 602 aa13.12□□□□□ -0.31
HMGA1-206ENST00000478214 CR1LQ2VPA4 569 aa13.12□□□□□ -0.31
HMGA1-206ENST00000478214 FAM120AOSQ5T036 256 aa13.12□□□□□ -0.31
HMGA1-206ENST00000478214 ZNF322Q6U7Q0 402 aaPredicted RBP13.12□□□□□ -0.31
HMGA1-206ENST00000478214 IL17RELQ6ZVW7 336 aa13.12□□□□□ -0.31
HMGA1-206ENST00000478214 ZNF679Q8IYX0 411 aa13.12□□□□□ -0.31
HMGA1-206ENST00000478214 CELF2-AS1Q8N7Q2 184 aa13.12□□□□□ -0.31
HMGA1-206ENST00000478214 OR8B12Q8NGG6 310 aa13.12□□□□□ -0.31
HMGA1-206ENST00000478214 RAB39BQ96DA2 213 aa13.12□□□□□ -0.31
HMGA1-206ENST00000478214 HRASLS5Q96KN8 279 aa13.12□□□□□ -0.31
HMGA1-206ENST00000478214 BEX2Q9BXY8 128 aa13.12□□□□□ -0.31
HMGA1-206ENST00000478214 MROQ9BYG7 248 aa13.12□□□□□ -0.31
HMGA1-206ENST00000478214 SHARPINQ9H0F6 387 aa13.12□□□□□ -0.31
HMGA1-206ENST00000478214 UFSP2Q9NUQ7 469 aa13.12□□□□□ -0.31
HMGA1-206ENST00000478214 CLN6Q9NWW5 311 aa13.12□□□□□ -0.31
HMGA1-206ENST00000478214 FAM206AQ9NX38 181 aa13.12□□□□□ -0.31
HMGA1-206ENST00000478214 IMPAD1Q9NX62 359 aa13.12□□□□□ -0.31
HMGA1-206ENST00000478214 IKZF2Q9UKS7 526 aa13.12□□□□□ -0.31
HMGA1-206ENST00000478214 NOP16Q9Y3C1 178 aaKnown RBP13.12□□□□□ -0.31
HMGA1-206ENST00000478214 DYSFO75923 2080 aa13.12□□□□□ -0.31
HMGA1-206ENST00000478214 TANC2Q9HCD6 1990 aa13.11□□□□□ -0.31
HMGA1-206ENST00000478214 TMEM269A0A1B0GVZ9 245 aa13.11□□□□□ -0.31
HMGA1-206ENST00000478214 ZNF670-ZNF695F2Z2N8 137 aa13.11□□□□□ -0.31
HMGA1-206ENST00000478214 IFNL4K9M1U5 179 aa13.11□□□□□ -0.31
HMGA1-206ENST00000478214 RIDAP52758 137 aaKnown RBP13.11□□□□□ -0.31
HMGA1-206ENST00000478214 BTG1P62324 171 aa13.11□□□□□ -0.31
HMGA1-206ENST00000478214 MPPED2Q15777 294 aa13.11□□□□□ -0.31
HMGA1-206ENST00000478214 KRTAP21-3Q3LHN1 58 aa13.11□□□□□ -0.31
HMGA1-206ENST00000478214 ZBTB49Q6ZSB9 765 aa13.11□□□□□ -0.31
HMGA1-206ENST00000478214 GLCCI1Q86VQ1 547 aa13.11□□□□□ -0.31
HMGA1-206ENST00000478214 LRRC28Q86X40 367 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms