RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 MUC1P15941 1255 aaPredicted RBP7.94□□□□□ -1.14
CCM2-210ENST00000478169 EEF1B2P24534 225 aaKnown RBP7.94□□□□□ -1.14
CCM2-210ENST00000478169 ZNF92Q03936 586 aa7.94□□□□□ -1.14
CCM2-210ENST00000478169 EGR3Q06889 387 aa7.94□□□□□ -1.14
CCM2-210ENST00000478169 SMARCD3Q6STE5 483 aa7.94□□□□□ -1.14
CCM2-210ENST00000478169 REC114Q7Z4M0 266 aa7.94□□□□□ -1.14
CCM2-210ENST00000478169 ZBTB46Q86UZ6 589 aa7.94□□□□□ -1.14
CCM2-210ENST00000478169 LINC00346Q8IVM7 164 aa7.94□□□□□ -1.14
CCM2-210ENST00000478169 PDZD9Q8IXQ8 264 aa7.94□□□□□ -1.14
CCM2-210ENST00000478169 CMTM4Q8IZR5 234 aa7.94□□□□□ -1.14
CCM2-210ENST00000478169 LY6G5BQ8NDX9 201 aa7.94□□□□□ -1.14
CCM2-210ENST00000478169 OR5R1Q8NH85 324 aa7.94□□□□□ -1.14
CCM2-210ENST00000478169 ST8SIA4Q92187 359 aa7.94□□□□□ -1.14
CCM2-210ENST00000478169 SPTSSAQ969W0 71 aa7.94□□□□□ -1.14
CCM2-210ENST00000478169 ZNF799Q96GE5 643 aa7.94□□□□□ -1.14
CCM2-210ENST00000478169 ERMAPQ96PL5 475 aaPredicted RBP7.94□□□□□ -1.14
CCM2-210ENST00000478169 SAR1AQ9NR31 198 aa7.94□□□□□ -1.14
CCM2-210ENST00000478169 C14orf119Q9NWQ9 140 aa7.94□□□□□ -1.14
CCM2-210ENST00000478169 CMTM6Q9NX76 183 aa7.94□□□□□ -1.14
CCM2-210ENST00000478169 FBLN5Q9UBX5 448 aa7.94□□□□□ -1.14
CCM2-210ENST00000478169 KCNG2Q9UJ96 466 aa7.94□□□□□ -1.14
CCM2-210ENST00000478169 FAM32AQ9Y421 112 aaKnown RBP7.94□□□□□ -1.14
CCM2-210ENST00000478169 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.93□□□□□ -1.14
CCM2-210ENST00000478169 A6NLC8 198 aa7.93□□□□□ -1.14
CCM2-210ENST00000478169 HMGB1P1B2RPK0 211 aaPredicted RBP7.93□□□□□ -1.14
CCM2-210ENST00000478169 G3V4G9 280 aa7.93□□□□□ -1.14
CCM2-210ENST00000478169 GSTA4O15217 222 aa7.93□□□□□ -1.14
CCM2-210ENST00000478169 SERPINA1P01009 418 aa7.93□□□□□ -1.14
CCM2-210ENST00000478169 HLA-DQA2P01906 255 aa7.93□□□□□ -1.14
CCM2-210ENST00000478169 OPN1MWP04001 364 aa7.93□□□□□ -1.14
CCM2-210ENST00000478169 GRPP07492 148 aa7.93□□□□□ -1.14
CCM2-210ENST00000478169 OPN1MW2P0DN77 364 aa7.93□□□□□ -1.14
CCM2-210ENST00000478169 OPN1MW3P0DN78 364 aa7.93□□□□□ -1.14
CCM2-210ENST00000478169 RHCEP18577 417 aa7.93□□□□□ -1.14
CCM2-210ENST00000478169 OTX1P32242 354 aaPredicted RBP7.93□□□□□ -1.14
CCM2-210ENST00000478169 GRK5P34947 590 aa7.93□□□□□ -1.14
CCM2-210ENST00000478169 LIPEQ05469 1076 aa7.93□□□□□ -1.14
CCM2-210ENST00000478169 GABPB1Q06547 395 aaPredicted RBP7.93□□□□□ -1.14
CCM2-210ENST00000478169 HERPUD1Q15011 391 aa7.93□□□□□ -1.14
CCM2-210ENST00000478169 MICBQ29980 383 aa7.93□□□□□ -1.14
CCM2-210ENST00000478169 RFX4Q33E94 735 aa7.93□□□□□ -1.14
CCM2-210ENST00000478169 SAMD5Q5TGI4 173 aa7.93□□□□□ -1.14
CCM2-210ENST00000478169 C11orf88Q6PI97 169 aa7.93□□□□□ -1.14
CCM2-210ENST00000478169 ZNF826PQ6ZT77 177 aa7.93□□□□□ -1.14
CCM2-210ENST00000478169 Q6ZTK2 550 aa7.93□□□□□ -1.14
CCM2-210ENST00000478169 SLC15A3Q8IY34 581 aa7.93□□□□□ -1.14
CCM2-210ENST00000478169 NMNAT3Q96T66 252 aa7.93□□□□□ -1.14
CCM2-210ENST00000478169 OPA3Q9H6K4 179 aa7.93□□□□□ -1.14
CCM2-210ENST00000478169 RNPEPL1Q9HAU8 725 aa7.93□□□□□ -1.14
CCM2-210ENST00000478169 RPRD1BQ9NQG5 326 aaKnown RBP7.93□□□□□ -1.14
CCM2-210ENST00000478169 DNAH3Q8TD57 4116 aa7.92□□□□□ -1.14
CCM2-210ENST00000478169 TRBV4-1A0A0J9YWV2 114 aa7.92□□□□□ -1.14
CCM2-210ENST00000478169 hCG_1807616A0A1W2PRN6 198 aa7.92□□□□□ -1.14
CCM2-210ENST00000478169 ANKRD61A6NGH8 418 aa7.92□□□□□ -1.14
CCM2-210ENST00000478169 RNASEK-C17orf49H0YIS7 233 aa7.92□□□□□ -1.14
CCM2-210ENST00000478169 BHLHE40O14503 412 aa7.92□□□□□ -1.14
CCM2-210ENST00000478169 NPFFO15130 113 aa7.92□□□□□ -1.14
CCM2-210ENST00000478169 SLC22A2O15244 555 aa7.92□□□□□ -1.14
CCM2-210ENST00000478169 PIN1P1O15428 100 aa7.92□□□□□ -1.14
CCM2-210ENST00000478169 IDH3BO43837 385 aa7.92□□□□□ -1.14
CCM2-210ENST00000478169 TROVE2P10155 538 aaKnown RBP eCLIP7.92□□□□□ -1.14
CCM2-210ENST00000478169 HIST1H1CP16403 213 aaKnown RBP7.92□□□□□ -1.14
CCM2-210ENST00000478169 ZNF823P16415 610 aa7.92□□□□□ -1.14
CCM2-210ENST00000478169 NOS3P29474 1203 aa7.92□□□□□ -1.14
CCM2-210ENST00000478169 SLC6A6P31641 620 aa7.92□□□□□ -1.14
CCM2-210ENST00000478169 GABRA5P31644 462 aa7.92□□□□□ -1.14
CCM2-210ENST00000478169 DDOSTP39656 456 aa7.92□□□□□ -1.14
CCM2-210ENST00000478169 SEC23BQ15437 767 aa7.92□□□□□ -1.14
CCM2-210ENST00000478169 SNAI3Q3KNW1 292 aa7.92□□□□□ -1.14
CCM2-210ENST00000478169 FGD3Q5JSP0 725 aa7.92□□□□□ -1.14
CCM2-210ENST00000478169 SLC35E4Q6ICL7 350 aa7.92□□□□□ -1.14
CCM2-210ENST00000478169 DRAM2Q6UX65 266 aa7.92□□□□□ -1.14
CCM2-210ENST00000478169 Q6ZPA2 131 aa7.92□□□□□ -1.14
CCM2-210ENST00000478169 C1orf122Q6ZSJ8 110 aa7.92□□□□□ -1.14
CCM2-210ENST00000478169 SLC36A1Q7Z2H8 476 aa7.92□□□□□ -1.14
CCM2-210ENST00000478169 OR4C15Q8NGM1 316 aa7.92□□□□□ -1.14
CCM2-210ENST00000478169 OR4K13Q8NH42 304 aa7.92□□□□□ -1.14
CCM2-210ENST00000478169 OR2AE1Q8NHA4 323 aa7.92□□□□□ -1.14
CCM2-210ENST00000478169 FANK1Q8TC84 345 aa7.92□□□□□ -1.14
CCM2-210ENST00000478169 PPP1R14AQ96A00 147 aa7.92□□□□□ -1.14
CCM2-210ENST00000478169 C12orf43Q96C57 262 aaKnown RBP7.92□□□□□ -1.14
CCM2-210ENST00000478169 MAP6Q96JE9 813 aa7.92□□□□□ -1.14
CCM2-210ENST00000478169 CCL13Q99616 98 aa7.92□□□□□ -1.14
CCM2-210ENST00000478169 HOPXQ9BPY8 73 aaPredicted RBP7.92□□□□□ -1.14
CCM2-210ENST00000478169 OR52D1Q9H346 318 aa7.92□□□□□ -1.14
CCM2-210ENST00000478169 SIRT7Q9NRC8 400 aa7.92□□□□□ -1.14
CCM2-210ENST00000478169 MRPL22Q9NWU5 206 aaKnown RBP7.92□□□□□ -1.14
CCM2-210ENST00000478169 NDUFAF4Q9P032 175 aa7.92□□□□□ -1.14
CCM2-210ENST00000478169 GMPR2Q9P2T1 348 aaKnown RBP7.92□□□□□ -1.14
CCM2-210ENST00000478169 ONECUT1Q9UBC0 465 aa7.92□□□□□ -1.14
CCM2-210ENST00000478169 CAPN7Q9Y6W3 813 aa7.92□□□□□ -1.14
CCM2-210ENST00000478169 IGHV3OR15-7A0A075B7D8 119 aa7.91□□□□□ -1.14
CCM2-210ENST00000478169 OR6C68A6NDL8 312 aa7.91□□□□□ -1.14
CCM2-210ENST00000478169 NDUFAB1O14561 156 aa7.91□□□□□ -1.14
CCM2-210ENST00000478169 NDUFB3O43676 98 aa7.91□□□□□ -1.14
CCM2-210ENST00000478169 TIPRLO75663 272 aa7.91□□□□□ -1.14
CCM2-210ENST00000478169 PAHP00439 452 aa7.91□□□□□ -1.14
CCM2-210ENST00000478169 NAA10P41227 235 aaPredicted RBP7.91□□□□□ -1.14
CCM2-210ENST00000478169 KIR2DS4P43632 304 aa7.91□□□□□ -1.14
CCM2-210ENST00000478169 ACSM1Q08AH1 577 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms