RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 SYNGR4O95473 234 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 GSTP1P09211 210 aaKnown RBP3.61□□□□□ -1.83
USP16-205ENST00000474835 CSF2RAP15509 400 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 AKT2P31751 481 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 MMP16P51512 607 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 TMEM50BP56557 158 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 HSD17B7P56937 341 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 OR1D5P58170 312 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 CCL20P78556 96 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 DAB2P98082 770 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 IRF8Q02556 426 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 PMPCAQ10713 525 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 RBM39Q14498 530 aaKnown RBP3.61□□□□□ -1.83
USP16-205ENST00000474835 ZNF726P1Q15940 193 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 RPL7L1Q6DKI1 246 aaKnown RBP3.61□□□□□ -1.83
USP16-205ENST00000474835 FCRL6Q6DN72 434 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 TMEM225Q6GV28 225 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 ATG4DQ86TL0 474 aaPredicted RBP3.61□□□□□ -1.83
USP16-205ENST00000474835 DTX1Q86Y01 620 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 BPIFB2Q8N4F0 458 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 OR13C2Q8NGS9 318 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 OR13G1Q8NGZ3 307 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 OR4X1Q8NH49 305 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 OR5K2Q8NHB8 316 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 ZNF417Q8TAU3 575 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 DNAJB3Q8WWF6 145 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 ASZ1Q8WWH4 475 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 THRSPQ92748 146 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 RAB8BQ92930 207 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 PRAP1Q96NZ9 151 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 UHRF2Q96PU4 802 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 ALKBH3Q96Q83 286 aaPredicted RBP3.61□□□□□ -1.83
USP16-205ENST00000474835 APOOQ9BUR5 198 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 CHIAQ9BZP6 476 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 FXYD6Q9H0Q3 95 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 ELL3Q9HB65 397 aaPredicted RBP3.61□□□□□ -1.83
USP16-205ENST00000474835 RCL1Q9Y2P8 373 aaKnown RBP3.61□□□□□ -1.83
USP16-205ENST00000474835 TIMM13Q9Y5L4 95 aaPredicted RBP3.61□□□□□ -1.83
USP16-205ENST00000474835 MYADML2A6NDP7 307 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 H3BMH7 237 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 PGRMC2O15173 223 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 ZNF208O43345 1280 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 PQBP1O60828 265 aaKnown RBP3.6□□□□□ -1.83
USP16-205ENST00000474835 OR4A8P0C604 315 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 NBEAP1P0C6P0 100 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 P0C879 139 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 NR2F1P10589 423 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 MAOAP21397 527 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 EDNRAP25101 427 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 PTGER4P35408 488 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 SP4Q02446 784 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 EXT1Q16394 746 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 WDR38Q5JTN6 314 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 C9orf50Q5SZB4 431 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 PTRHD1Q6GMV3 140 aaKnown RBP3.6□□□□□ -1.83
USP16-205ENST00000474835 OPN5Q6U736 354 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 TOMM20LQ6UXN7 152 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 SLC24A5Q71RS6 500 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 Q7L0L9 218 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 KMT5CQ86Y97 462 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 MRPL41Q8IXM3 137 aaKnown RBP3.6□□□□□ -1.83
USP16-205ENST00000474835 GTPBP8Q8N3Z3 284 aaPredicted RBP3.6□□□□□ -1.83
USP16-205ENST00000474835 LMNTD1Q8N9Z9 388 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 OR2A1Q8NGT9 310 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 OR51F2Q8NH61 342 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 POC1BQ8TC44 478 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 RNASE8Q8TDE3 154 aaKnown RBP3.6□□□□□ -1.83
USP16-205ENST00000474835 GPR146Q96CH1 333 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 C10orf35Q96D05 121 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 C2orf50Q96LR7 162 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 ZNF285Q96NJ3 590 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 WFIKKN1Q96NZ8 548 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 SDF2L1Q9HCN8 221 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 PNRC2Q9NPJ4 139 aaKnown RBP3.6□□□□□ -1.83
USP16-205ENST00000474835 FAM206AQ9NX38 181 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 ELOVL5Q9NYP7 299 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 C1RLQ9NZP8 487 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 KIAA1456Q9P272 454 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 ZFP30Q9Y2G7 519 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 RELNP78509 3460 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 CHD9Q3L8U1 2897 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 DOCK9Q9BZ29 2069 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 LNP1A1A4G5 178 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 F5H5T6 163 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 J3QLW9 94 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 CYR61O00622 381 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 UMODP07911 640 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 ZNF19P17023 458 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 CD1BP29016 333 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 AKR1C2P52895 323 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 CASP9P55211 416 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 PAX9P55771 341 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 AKR1C1Q04828 323 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 TAF10Q12962 218 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 EIF4EBP1Q13541 118 aaPredicted RBP3.6□□□□□ -1.83
USP16-205ENST00000474835 ENPP2Q13822 863 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 SLC10A1Q14973 349 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 HIST3H3Q16695 136 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 GUK1Q16774 197 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 VWC2Q2TAL6 325 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms