RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 BRD7Q9NPI1 651 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 ACOXLQ9NUZ1 547 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 PTTG3PQ9NZH4 202 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 EIF3KQ9UBQ5 218 aaKnown RBP5.96□□□□□ -1.46
LIMD1-204ENST00000474665 CMAHPQ9Y471 501 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 SPEF1Q9Y4P9 236 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 TMEM14AQ9Y6G1 99 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 CR1P17927 2039 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 TANC2Q9HCD6 1990 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 A0A1B0GTI1 187 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 TMEM269A0A1B0GVZ9 245 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 A0A1B0GWJ7 208 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 DAPL1A0PJW8 107 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 METTL15A6NJ78 407 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 SNTNA6NMZ2 147 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 B9A039 149 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 H3BSA7 217 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 J3QW42 95 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 ZNF254O75437 659 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 NCR1O76036 304 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 LY6HO94772 140 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 RPP14O95059 124 aaKnown RBP5.95□□□□□ -1.46
LIMD1-204ENST00000474665 FADS2O95864 444 aaKnown RBP5.95□□□□□ -1.46
LIMD1-204ENST00000474665 IGHV4-39P01824 125 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 TTRP02766 147 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 NAT2P11245 290 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 PIPP12273 146 aaPredicted RBP5.95□□□□□ -1.46
LIMD1-204ENST00000474665 RAC2P15153 192 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 KITLGP21583 273 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 CRHBPP24387 322 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 ACKR3P25106 362 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 DCKP27707 260 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 CDKN1AP38936 164 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 PSMB10P40306 273 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 KIR3DL2P43630 455 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 EVX1P49640 407 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 KLF3P57682 345 aaPredicted RBP5.95□□□□□ -1.46
LIMD1-204ENST00000474665 RPS23P62266 143 aaKnown RBP5.95□□□□□ -1.46
LIMD1-204ENST00000474665 SLC35A2P78381 396 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 FAM3AP98173 230 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 SRSF2Q01130 221 aaKnown RBP5.95□□□□□ -1.46
LIMD1-204ENST00000474665 IRF3Q14653 427 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 TAF13Q15543 124 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 PDLIM3Q53GG5 364 aaPredicted RBP5.95□□□□□ -1.46
LIMD1-204ENST00000474665 KLHL22Q53GT1 634 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 OR2G6Q5TZ20 316 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 AGAP6Q5VW22 663 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 OR2T2Q6IF00 324 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 FDX2Q6P4F2 183 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 KCTD18Q6PI47 426 aaPredicted RBP5.95□□□□□ -1.46
LIMD1-204ENST00000474665 AHSA2Q719I0 299 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 CATSPERDQ86XM0 798 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 SYNPRQ8TBG9 265 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 C4orf36Q96KX1 117 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 CNBD2Q96M20 576 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 SORCS2Q96PQ0 1159 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 CCL19Q99731 98 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 ALG8Q9BVK2 526 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 CACNG6Q9BXT2 260 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 MROQ9BYG7 248 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 NIPAL2Q9H841 368 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 CNOT2Q9NZN8 540 aaKnown RBP5.95□□□□□ -1.46
LIMD1-204ENST00000474665 TAAR3PQ9P1P4 343 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 NUFIP1Q9UHK0 495 aaKnown RBP5.95□□□□□ -1.46
LIMD1-204ENST00000474665 DUSP13Q9UII6 198 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 PURGQ9UJV8 347 aaKnown RBP5.95□□□□□ -1.46
LIMD1-204ENST00000474665 IKZF2Q9UKS7 526 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 DIMT1Q9UNQ2 313 aaKnown RBP5.95□□□□□ -1.46
LIMD1-204ENST00000474665 SLC22A13Q9Y226 551 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 ZNF281Q9Y2X9 895 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 LRRC42Q9Y546 428 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 N6AMT1Q9Y5N5 214 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 SIRT4Q9Y6E7 314 aaPredicted RBP5.95□□□□□ -1.46
LIMD1-204ENST00000474665 R4GMQ9 66 aa5.95□□□□□ -1.46
LIMD1-204ENST00000474665 ANK2Q01484 3957 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 A0A0G2JK05 382 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 hCG_38984A0A1B0GV85 526 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 EFCAB10A6NFE3 127 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 OR4C45A6NMZ5 311 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 CD300LBA8K4G0 201 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 PTGES3LE9PB15 166 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 H7C417 338 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 PHYHO14832 338 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 KRT8P05787 483 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 CDK1P06493 297 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 ANXA2P07355 339 aaKnown RBP5.94□□□□□ -1.46
LIMD1-204ENST00000474665 CCDC159P0C7I6 412 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 TUBG1P23258 451 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 HSD11B1P28845 292 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 GSK3AP49840 483 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 GTF2A1P52655 376 aaPredicted RBP5.94□□□□□ -1.46
LIMD1-204ENST00000474665 RIDAP52758 137 aaKnown RBP5.94□□□□□ -1.46
LIMD1-204ENST00000474665 ACTC1P68032 377 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 ACTA1P68133 377 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 OR8B8Q15620 311 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 ZNF718Q3SXZ3 478 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 WDR38Q5JTN6 314 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 ARL9Q6T311 187 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 DNM1P46Q6ZS02 220 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 Q6ZSR3 168 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms