RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 NUBPLQ8TB37 319 aa2.66□□□□□ -1.98
PRPF3-204ENST00000470824 WFIKKN1Q96NZ8 548 aa2.66□□□□□ -1.98
PRPF3-204ENST00000470824 SLC25A2Q9BXI2 301 aa2.66□□□□□ -1.98
PRPF3-204ENST00000470824 SLC25A39Q9BZJ4 359 aaPredicted RBP2.66□□□□□ -1.98
PRPF3-204ENST00000470824 UCK2Q9BZX2 261 aa2.66□□□□□ -1.98
PRPF3-204ENST00000470824 PARP12Q9H0J9 701 aaKnown RBP2.66□□□□□ -1.98
PRPF3-204ENST00000470824 NTN4Q9HB63 628 aa2.66□□□□□ -1.98
PRPF3-204ENST00000470824 CRLF2Q9HC73 371 aa2.66□□□□□ -1.98
PRPF3-204ENST00000470824 LYRM4Q9HD34 91 aa2.66□□□□□ -1.98
PRPF3-204ENST00000470824 TMEM9BQ9NQ34 198 aa2.66□□□□□ -1.98
PRPF3-204ENST00000470824 FAM49BQ9NUQ9 324 aa2.66□□□□□ -1.98
PRPF3-204ENST00000470824 ZNF609O15014 1411 aa2.66□□□□□ -1.98
PRPF3-204ENST00000470824 MYH13Q9UKX3 1938 aa2.66□□□□□ -1.98
PRPF3-204ENST00000470824 GAKO14976 1311 aa2.66□□□□□ -1.98
PRPF3-204ENST00000470824 PHLPP2Q6ZVD8 1323 aa2.66□□□□□ -1.98
PRPF3-204ENST00000470824 A0A1B0GTQ1 180 aa2.65□□□□□ -1.99
PRPF3-204ENST00000470824 GOLGA6L10A6NI86 522 aa2.65□□□□□ -1.99
PRPF3-204ENST00000470824 TMX2-CTNND1H3BSU7 103 aa2.65□□□□□ -1.99
PRPF3-204ENST00000470824 CETN3O15182 167 aa2.65□□□□□ -1.99
PRPF3-204ENST00000470824 CD160O95971 181 aa2.65□□□□□ -1.99
PRPF3-204ENST00000470824 ARG1P05089 322 aa2.65□□□□□ -1.99
PRPF3-204ENST00000470824 OR5H8P0DN80 308 aa2.65□□□□□ -1.99
PRPF3-204ENST00000470824 WARSP23381 471 aaKnown RBP2.65□□□□□ -1.99
PRPF3-204ENST00000470824 OR1E1P30953 314 aa2.65□□□□□ -1.99
PRPF3-204ENST00000470824 TNFSF9P41273 254 aa2.65□□□□□ -1.99
PRPF3-204ENST00000470824 SLC1A2P43004 574 aa2.65□□□□□ -1.99
PRPF3-204ENST00000470824 RND2P52198 227 aa2.65□□□□□ -1.99
PRPF3-204ENST00000470824 BASP1P80723 227 aaKnown RBP2.65□□□□□ -1.99
PRPF3-204ENST00000470824 GGTLC2Q14390 218 aa2.65□□□□□ -1.99
PRPF3-204ENST00000470824 WDR43Q15061 677 aaKnown RBP eCLIP2.65□□□□□ -1.99
PRPF3-204ENST00000470824 QPRTQ15274 297 aa2.65□□□□□ -1.99
PRPF3-204ENST00000470824 ZNF726P1Q15940 193 aa2.65□□□□□ -1.99
PRPF3-204ENST00000470824 UBE2UQ5VVX9 321 aa2.65□□□□□ -1.99
PRPF3-204ENST00000470824 ZFP90Q8TF47 636 aa2.65□□□□□ -1.99
PRPF3-204ENST00000470824 GLYATL2Q8WU03 294 aa2.65□□□□□ -1.99
PRPF3-204ENST00000470824 CDKL2Q92772 493 aa2.65□□□□□ -1.99
PRPF3-204ENST00000470824 DCPSQ96C86 337 aaKnown RBP2.65□□□□□ -1.99
PRPF3-204ENST00000470824 SEH1LQ96EE3 360 aa2.65□□□□□ -1.99
PRPF3-204ENST00000470824 CEP170P1Q96L14 293 aa2.65□□□□□ -1.99
PRPF3-204ENST00000470824 JSRP1Q96MG2 331 aaPredicted RBP2.65□□□□□ -1.99
PRPF3-204ENST00000470824 MICU1Q9BPX6 476 aa2.65□□□□□ -1.99
PRPF3-204ENST00000470824 STMN4Q9H169 189 aaPredicted RBP2.65□□□□□ -1.99
PRPF3-204ENST00000470824 BEX1Q9HBH7 125 aa2.65□□□□□ -1.99
PRPF3-204ENST00000470824 ISYNA1Q9NPH2 558 aa2.65□□□□□ -1.99
PRPF3-204ENST00000470824 RBAKQ9NYW8 714 aaPredicted RBP2.65□□□□□ -1.99
PRPF3-204ENST00000470824 UVRAGQ9P2Y5 699 aa2.65□□□□□ -1.99
PRPF3-204ENST00000470824 PSG8Q9UQ74 426 aa2.65□□□□□ -1.99
PRPF3-204ENST00000470824 SAR1BQ9Y6B6 198 aa2.65□□□□□ -1.99
PRPF3-204ENST00000470824 SPTBN5Q9NRC6 3674 aaKnown RBP2.65□□□□□ -1.99
PRPF3-204ENST00000470824 RTL9Q8NET4 1388 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 UQCRHLA0A096LP55 91 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 IGHV3-74A0A0B4J1X5 117 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 GOLGA6L7A0A1B0GV03 622 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 A0A1B0GW55 424 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 GOLGA6L4A6NEF3 574 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 C11orf94C9JXX5 98 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 L7N2F9 121 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 AIREO43918 545 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 ZNF189O75820 626 aaPredicted RBP2.64□□□□□ -1.99
PRPF3-204ENST00000470824 GABARAPO95166 117 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 LSM8O95777 96 aaKnown RBP2.64□□□□□ -1.99
PRPF3-204ENST00000470824 HLA-HP01893 362 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 UQCRHP07919 91 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 CLTAP09496 248 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 UBCP0CG48 685 aaKnown RBP2.64□□□□□ -1.99
PRPF3-204ENST00000470824 DUX4L2P0CJ85 424 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 DUX4L3P0CJ86 424 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 DUX4L5P0CJ88 424 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 DUX4L6P0CJ89 424 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 DUX4L7P0CJ90 424 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 PRPS2P11908 318 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 GGT1P19440 569 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 MSNP26038 577 aaKnown RBP2.64□□□□□ -1.99
PRPF3-204ENST00000470824 ETV1P50549 477 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 DR1Q01658 176 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 RAD51Q06609 339 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 SPAG1Q07617 926 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 MAB21L1Q13394 359 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 NCF4Q15080 339 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 PIP5KL1Q5T9C9 394 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 TSPO2Q5TGU0 170 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 PLCXD3Q63HM9 321 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 OR52W1Q6IF63 320 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 DUX4L9Q6RFH8 374 aaPredicted RBP2.64□□□□□ -1.99
PRPF3-204ENST00000470824 IGFL2Q6UWQ7 119 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 NPSR1Q6W5P4 371 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 KRTAP11-1Q8IUC1 163 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 SLC34A3Q8N130 599 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 Q8N976 141 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 ANKRD7Q92527 254 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 TMEM230Q96A57 120 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 BMFQ96LC9 184 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 OPALINQ96PE5 141 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 ANKRD60Q9BZ19 345 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 TSGA10Q9BZW7 698 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 RPRD1BQ9NQG5 326 aaKnown RBP2.64□□□□□ -1.99
PRPF3-204ENST00000470824 PXMP2Q9NR77 195 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 CHRAC1Q9NRG0 131 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 DUX4Q9UBX2 424 aa2.64□□□□□ -1.99
PRPF3-204ENST00000470824 OR12D3Q9UGF7 316 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms