RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 GMDSO60547 372 aa20.33■□□□□ 0.85
PTCH1-210ENST00000468211 FCN3O75636 299 aa20.33■□□□□ 0.85
PTCH1-210ENST00000468211 CCNB2O95067 398 aa20.33■□□□□ 0.85
PTCH1-210ENST00000468211 SOX14O95416 240 aa20.33■□□□□ 0.85
PTCH1-210ENST00000468211 SFTPBP07988 381 aa20.33■□□□□ 0.85
PTCH1-210ENST00000468211 ENTPD1P49961 510 aa20.33■□□□□ 0.85
PTCH1-210ENST00000468211 MXRA7P84157 204 aa20.33■□□□□ 0.85
PTCH1-210ENST00000468211 SPATS1Q496A3 300 aa20.33■□□□□ 0.85
PTCH1-210ENST00000468211 PRR31Q5SQ13 230 aa20.33■□□□□ 0.85
PTCH1-210ENST00000468211 RUSC1-AS1Q66K80 236 aa20.33■□□□□ 0.85
PTCH1-210ENST00000468211 SPATC1Q76KD6 591 aa20.33■□□□□ 0.85
PTCH1-210ENST00000468211 OR56B2PQ8NGI1 322 aa20.33■□□□□ 0.85
PTCH1-210ENST00000468211 TECTBQ96PL2 329 aa20.33■□□□□ 0.85
PTCH1-210ENST00000468211 RASSF4Q9H2L5 321 aa20.33■□□□□ 0.85
PTCH1-210ENST00000468211 SMURF1Q9HCE7 757 aa20.33■□□□□ 0.85
PTCH1-210ENST00000468211 CENPMQ9NSP4 180 aa20.33■□□□□ 0.85
PTCH1-210ENST00000468211 C1orf123Q9NWV4 160 aa20.33■□□□□ 0.85
PTCH1-210ENST00000468211 ACTR3BQ9P1U1 418 aa20.33■□□□□ 0.85
PTCH1-210ENST00000468211 ZNF593O00488 134 aaPredicted RBP20.32■□□□□ 0.84
PTCH1-210ENST00000468211 HOXA3O43365 443 aaPredicted RBP20.32■□□□□ 0.84
PTCH1-210ENST00000468211 SPI1P17947 270 aa20.32■□□□□ 0.84
PTCH1-210ENST00000468211 FMO3P31513 532 aa20.32■□□□□ 0.84
PTCH1-210ENST00000468211 KCNJ15Q99712 375 aa20.32■□□□□ 0.84
PTCH1-210ENST00000468211 PRDM13Q9H4Q3 707 aa20.32■□□□□ 0.84
PTCH1-210ENST00000468211 ARMC1Q9NVT9 282 aa20.32■□□□□ 0.84
PTCH1-210ENST00000468211 MRPL15Q9P015 296 aaKnown RBP20.32■□□□□ 0.84
PTCH1-210ENST00000468211 ENSAO43768 121 aaKnown RBP20.31■□□□□ 0.84
PTCH1-210ENST00000468211 GRPP07492 148 aa20.31■□□□□ 0.84
PTCH1-210ENST00000468211 MDKP21741 143 aaPredicted RBP20.31■□□□□ 0.84
PTCH1-210ENST00000468211 OMGP23515 440 aa20.31■□□□□ 0.84
PTCH1-210ENST00000468211 GNGT1P63211 74 aa20.31■□□□□ 0.84
PTCH1-210ENST00000468211 OR8B8Q15620 311 aa20.31■□□□□ 0.84
PTCH1-210ENST00000468211 C16orf87Q6PH81 154 aa20.31■□□□□ 0.84
PTCH1-210ENST00000468211 LINC00471Q8N535 108 aa20.31■□□□□ 0.84
PTCH1-210ENST00000468211 GCSAMQ8N6F7 178 aa20.31■□□□□ 0.84
PTCH1-210ENST00000468211 TBX15Q96SF7 602 aa20.31■□□□□ 0.84
PTCH1-210ENST00000468211 PCGF1Q9BSM1 259 aa20.31■□□□□ 0.84
PTCH1-210ENST00000468211 ZNF696Q9H7X3 374 aa20.31■□□□□ 0.84
PTCH1-210ENST00000468211 NOP16Q9Y3C1 178 aaKnown RBP20.31■□□□□ 0.84
PTCH1-210ENST00000468211 U3KQV3 271 aa20.31■□□□□ 0.84
PTCH1-210ENST00000468211 ADAM20O43506 726 aa20.3■□□□□ 0.84
PTCH1-210ENST00000468211 MMP9P14780 707 aa20.3■□□□□ 0.84
PTCH1-210ENST00000468211 CFHR2P36980 270 aa20.3■□□□□ 0.84
PTCH1-210ENST00000468211 SLC25A1P53007 311 aa20.3■□□□□ 0.84
PTCH1-210ENST00000468211 IL13RA1P78552 427 aa20.3■□□□□ 0.84
PTCH1-210ENST00000468211 POU4F2Q12837 409 aa20.3■□□□□ 0.84
PTCH1-210ENST00000468211 TAF13Q15543 124 aa20.3■□□□□ 0.84
PTCH1-210ENST00000468211 TEX30Q5JUR7 227 aa20.3■□□□□ 0.84
PTCH1-210ENST00000468211 LINC01590Q5TEZ4 76 aa20.3■□□□□ 0.84
PTCH1-210ENST00000468211 WDR86Q86TI4 376 aa20.3■□□□□ 0.84
PTCH1-210ENST00000468211 PLPP7Q8NBV4 271 aa20.3■□□□□ 0.84
PTCH1-210ENST00000468211 PPP1R3EQ9H7J1 279 aa20.3■□□□□ 0.84
PTCH1-210ENST00000468211 NDE1Q9NXR1 346 aa20.3■□□□□ 0.84
PTCH1-210ENST00000468211 ERVK-18Q9QC07 812 aa20.3■□□□□ 0.84
PTCH1-210ENST00000468211 DHRS12A0PJE2 317 aa20.29■□□□□ 0.84
PTCH1-210ENST00000468211 OOEPA6NGQ2 149 aa20.29■□□□□ 0.84
PTCH1-210ENST00000468211 KCNAB3O43448 404 aa20.29■□□□□ 0.84
PTCH1-210ENST00000468211 GYPAP02724 150 aa20.29■□□□□ 0.84
PTCH1-210ENST00000468211 NPY4RP50391 375 aa20.29■□□□□ 0.84
PTCH1-210ENST00000468211 MS4A2Q01362 244 aa20.29■□□□□ 0.84
PTCH1-210ENST00000468211 GPR157Q5UAW9 335 aa20.29■□□□□ 0.84
PTCH1-210ENST00000468211 FAM90A1Q86YD7 464 aa20.29■□□□□ 0.84
PTCH1-210ENST00000468211 C11orf53Q8IXP5 236 aa20.29■□□□□ 0.84
PTCH1-210ENST00000468211 OR6K6Q8NGW6 343 aa20.29■□□□□ 0.84
PTCH1-210ENST00000468211 SPSB4Q96A44 273 aa20.29■□□□□ 0.84
PTCH1-210ENST00000468211 TMIGD2Q96BF3 282 aa20.29■□□□□ 0.84
PTCH1-210ENST00000468211 MED20Q9H944 212 aa20.29■□□□□ 0.84
PTCH1-210ENST00000468211 TNFRSF19Q9NS68 423 aa20.29■□□□□ 0.84
PTCH1-210ENST00000468211 IGHV3OR15-7A0A075B7D8 119 aa20.28■□□□□ 0.84
PTCH1-210ENST00000468211 A6NLC8 198 aa20.28■□□□□ 0.84
PTCH1-210ENST00000468211 ZNF879B4DU55 563 aa20.28■□□□□ 0.84
PTCH1-210ENST00000468211 ZNF878C9JN71 531 aa20.28■□□□□ 0.84
PTCH1-210ENST00000468211 DCTN3O75935 186 aa20.28■□□□□ 0.84
PTCH1-210ENST00000468211 LHBP01229 141 aa20.28■□□□□ 0.84
PTCH1-210ENST00000468211 ELF3P78545 371 aaPredicted RBP20.28■□□□□ 0.84
PTCH1-210ENST00000468211 MICAQ29983 383 aa20.28■□□□□ 0.84
PTCH1-210ENST00000468211 OR2T5Q6IEZ7 315 aa20.28■□□□□ 0.84
PTCH1-210ENST00000468211 FGFRL1Q8N441 504 aa20.28■□□□□ 0.84
PTCH1-210ENST00000468211 OR2T33Q8NG76 320 aa20.28■□□□□ 0.84
PTCH1-210ENST00000468211 OR2T29Q8NH02 315 aa20.28■□□□□ 0.84
PTCH1-210ENST00000468211 ZDHHC16Q969W1 377 aa20.28■□□□□ 0.84
PTCH1-210ENST00000468211 DGCR6LQ9BY27 220 aa20.28■□□□□ 0.84
PTCH1-210ENST00000468211 MAGIXQ9H6Y5 334 aa20.28■□□□□ 0.84
PTCH1-210ENST00000468211 MARCH7Q9H992 704 aa20.28■□□□□ 0.84
PTCH1-210ENST00000468211 TRAV38-1A0A0B4J264 116 aa20.27■□□□□ 0.84
PTCH1-210ENST00000468211 CENPVL3A0A0U1RRI6 287 aa20.27■□□□□ 0.84
PTCH1-210ENST00000468211 FAM183AA6NL82 134 aa20.27■□□□□ 0.84
PTCH1-210ENST00000468211 B2RBV5 119 aa20.27■□□□□ 0.84
PTCH1-210ENST00000468211 SRRM5B3KS81 715 aa20.27■□□□□ 0.84
PTCH1-210ENST00000468211 TBX1O43435 398 aa20.27■□□□□ 0.84
PTCH1-210ENST00000468211 CX3CR1P49238 355 aa20.27■□□□□ 0.84
PTCH1-210ENST00000468211 FAM3AP98173 230 aa20.27■□□□□ 0.84
PTCH1-210ENST00000468211 EIF2B1Q14232 305 aaKnown RBP20.27■□□□□ 0.84
PTCH1-210ENST00000468211 KCNJ8Q15842 424 aa20.27■□□□□ 0.84
PTCH1-210ENST00000468211 CD276Q5ZPR3 534 aa20.27■□□□□ 0.84
PTCH1-210ENST00000468211 LCN8Q6JVE9 175 aa20.27■□□□□ 0.84
PTCH1-210ENST00000468211 SLC16A9Q7RTY1 509 aa20.27■□□□□ 0.84
PTCH1-210ENST00000468211 SPERTQ8NA61 448 aa20.27■□□□□ 0.84
PTCH1-210ENST00000468211 SGK3Q96BR1 496 aa20.27■□□□□ 0.84
PTCH1-210ENST00000468211 AMELYQ99218 206 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms