RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 CSNK1A1P48729 337 aa12.19□□□□□ -0.46
HMGXB4-206ENST00000466438 PLP2Q04941 152 aa12.19□□□□□ -0.46
HMGXB4-206ENST00000466438 ZNF74Q16587 644 aa12.19□□□□□ -0.46
HMGXB4-206ENST00000466438 MS4A18Q3C1V0 323 aa12.19□□□□□ -0.46
HMGXB4-206ENST00000466438 SLC36A2Q495M3 483 aa12.19□□□□□ -0.46
HMGXB4-206ENST00000466438 ZBED5Q49AG3 693 aa12.19□□□□□ -0.46
HMGXB4-206ENST00000466438 RBM48Q5RL73 367 aaKnown RBP12.19□□□□□ -0.46
HMGXB4-206ENST00000466438 HIST3H2AQ7L7L0 130 aa12.19□□□□□ -0.46
HMGXB4-206ENST00000466438 ZNF101Q8IZC7 436 aa12.19□□□□□ -0.46
HMGXB4-206ENST00000466438 C11orf44Q8N8P7 122 aa12.19□□□□□ -0.46
HMGXB4-206ENST00000466438 OR2T33Q8NG76 320 aa12.19□□□□□ -0.46
HMGXB4-206ENST00000466438 OR13C2Q8NGS9 318 aa12.19□□□□□ -0.46
HMGXB4-206ENST00000466438 OR6S1Q8NH40 331 aa12.19□□□□□ -0.46
HMGXB4-206ENST00000466438 SLC25A40Q8TBP6 338 aa12.19□□□□□ -0.46
HMGXB4-206ENST00000466438 TRUB1Q8WWH5 349 aaKnown RBP12.19□□□□□ -0.46
HMGXB4-206ENST00000466438 LIPHQ8WWY8 451 aa12.19□□□□□ -0.46
HMGXB4-206ENST00000466438 HDAC2Q92769 488 aaKnown RBP12.19□□□□□ -0.46
HMGXB4-206ENST00000466438 HIST1H2ACQ93077 130 aa12.19□□□□□ -0.46
HMGXB4-206ENST00000466438 TAAR8Q969N4 342 aa12.19□□□□□ -0.46
HMGXB4-206ENST00000466438 TXNDC15Q96J42 360 aa12.19□□□□□ -0.46
HMGXB4-206ENST00000466438 OR52D1Q9H346 318 aa12.19□□□□□ -0.46
HMGXB4-206ENST00000466438 EGLN3Q9H6Z9 239 aa12.19□□□□□ -0.46
HMGXB4-206ENST00000466438 NANSQ9NR45 359 aa12.19□□□□□ -0.46
HMGXB4-206ENST00000466438 TMEM38BQ9NVV0 291 aa12.19□□□□□ -0.46
HMGXB4-206ENST00000466438 ZNF229Q9UJW7 825 aa12.19□□□□□ -0.46
HMGXB4-206ENST00000466438 PPP1R3CQ9UQK1 317 aa12.19□□□□□ -0.46
HMGXB4-206ENST00000466438 TMEM178BH3BS89 294 aa12.18□□□□□ -0.46
HMGXB4-206ENST00000466438 NDUFB2O95178 105 aa12.18□□□□□ -0.46
HMGXB4-206ENST00000466438 CH25HO95992 272 aa12.18□□□□□ -0.46
HMGXB4-206ENST00000466438 LYNP07948 512 aa12.18□□□□□ -0.46
HMGXB4-206ENST00000466438 FUT1P19526 365 aa12.18□□□□□ -0.46
HMGXB4-206ENST00000466438 EPHA2P29317 976 aa12.18□□□□□ -0.46
HMGXB4-206ENST00000466438 GABRA5P31644 462 aa12.18□□□□□ -0.46
HMGXB4-206ENST00000466438 CFHR2P36980 270 aa12.18□□□□□ -0.46
HMGXB4-206ENST00000466438 ISL1P61371 349 aa12.18□□□□□ -0.46
HMGXB4-206ENST00000466438 CSNK2BP67870 215 aa12.18□□□□□ -0.46
HMGXB4-206ENST00000466438 CDK5Q00535 292 aa12.18□□□□□ -0.46
HMGXB4-206ENST00000466438 CD47Q08722 323 aa12.18□□□□□ -0.46
HMGXB4-206ENST00000466438 CDK5R2Q13319 367 aa12.18□□□□□ -0.46
HMGXB4-206ENST00000466438 KCTD21Q4G0X4 260 aa12.18□□□□□ -0.46
HMGXB4-206ENST00000466438 C12orf73Q69YU5 71 aa12.18□□□□□ -0.46
HMGXB4-206ENST00000466438 UNQ6126/PRO20091Q6UXV3 157 aa12.18□□□□□ -0.46
HMGXB4-206ENST00000466438 NHLRC1Q6VVB1 395 aa12.18□□□□□ -0.46
HMGXB4-206ENST00000466438 VASH1Q7L8A9 365 aaPredicted RBP12.18□□□□□ -0.46
HMGXB4-206ENST00000466438 NANOGNBQ7Z5D8 188 aa12.18□□□□□ -0.46
HMGXB4-206ENST00000466438 OR8B3Q8NGG8 313 aa12.18□□□□□ -0.46
HMGXB4-206ENST00000466438 OR8B2Q96RD0 313 aa12.18□□□□□ -0.46
HMGXB4-206ENST00000466438 TSSK6Q9BXA6 273 aa12.18□□□□□ -0.46
HMGXB4-206ENST00000466438 ASPNQ9BXN1 380 aa12.18□□□□□ -0.46
HMGXB4-206ENST00000466438 OR2J1Q9GZK6 312 aa12.18□□□□□ -0.46
HMGXB4-206ENST00000466438 SCOCQ9UIL1 159 aa12.18□□□□□ -0.46
HMGXB4-206ENST00000466438 VPREB3Q9UKI3 123 aa12.18□□□□□ -0.46
HMGXB4-206ENST00000466438 SIGLEC7Q9Y286 467 aa12.18□□□□□ -0.46
HMGXB4-206ENST00000466438 IGHV1-69DA0A0B4J2H0 117 aa12.17□□□□□ -0.46
HMGXB4-206ENST00000466438 A0A0U1RQK1 487 aa12.17□□□□□ -0.46
HMGXB4-206ENST00000466438 H3BSA7 217 aa12.17□□□□□ -0.46
HMGXB4-206ENST00000466438 ENSAO43768 121 aaKnown RBP12.17□□□□□ -0.46
HMGXB4-206ENST00000466438 IGHV1-69P01742 117 aa12.17□□□□□ -0.46
HMGXB4-206ENST00000466438 HMGN1P05114 100 aa12.17□□□□□ -0.46
HMGXB4-206ENST00000466438 CCNOP22674 350 aa12.17□□□□□ -0.46
HMGXB4-206ENST00000466438 GRK5P34947 590 aa12.17□□□□□ -0.46
HMGXB4-206ENST00000466438 WNT5AP41221 380 aa12.17□□□□□ -0.46
HMGXB4-206ENST00000466438 PITPNBP48739 271 aa12.17□□□□□ -0.46
HMGXB4-206ENST00000466438 CXCR4P61073 352 aa12.17□□□□□ -0.46
HMGXB4-206ENST00000466438 GINS1Q14691 196 aa12.17□□□□□ -0.46
HMGXB4-206ENST00000466438 SLC35E4Q6ICL7 350 aa12.17□□□□□ -0.46
HMGXB4-206ENST00000466438 C11orf88Q6PI97 169 aa12.17□□□□□ -0.46
HMGXB4-206ENST00000466438 PTCHD4Q6ZW05 846 aa12.17□□□□□ -0.46
HMGXB4-206ENST00000466438 NLRC3Q7RTR2 1065 aa12.17□□□□□ -0.46
HMGXB4-206ENST00000466438 SLC16A14Q7RTX9 510 aa12.17□□□□□ -0.46
HMGXB4-206ENST00000466438 ENTHD1Q8IYW4 607 aa12.17□□□□□ -0.46
HMGXB4-206ENST00000466438 OR8J1Q8NGP2 316 aa12.17□□□□□ -0.46
HMGXB4-206ENST00000466438 FBLIM1Q8WUP2 373 aa12.17□□□□□ -0.46
HMGXB4-206ENST00000466438 Q96MT0 163 aa12.17□□□□□ -0.46
HMGXB4-206ENST00000466438 TBX15Q96SF7 602 aa12.17□□□□□ -0.46
HMGXB4-206ENST00000466438 CDADC1Q9BWV3 514 aa12.17□□□□□ -0.46
HMGXB4-206ENST00000466438 EIF3KQ9UBQ5 218 aaKnown RBP12.17□□□□□ -0.46
HMGXB4-206ENST00000466438 TRAV27A0A087WT01 109 aa12.16□□□□□ -0.46
HMGXB4-206ENST00000466438 BTBD17A6NE02 478 aa12.16□□□□□ -0.46
HMGXB4-206ENST00000466438 SNTNA6NMZ2 147 aa12.16□□□□□ -0.46
HMGXB4-206ENST00000466438 TOX4O94842 621 aa12.16□□□□□ -0.46
HMGXB4-206ENST00000466438 CCDC159P0C7I6 412 aa12.16□□□□□ -0.46
HMGXB4-206ENST00000466438 MMP9P14780 707 aa12.16□□□□□ -0.46
HMGXB4-206ENST00000466438 MMP16P51512 607 aa12.16□□□□□ -0.46
HMGXB4-206ENST00000466438 EFNB2P52799 333 aa12.16□□□□□ -0.46
HMGXB4-206ENST00000466438 GABARAPL2P60520 117 aa12.16□□□□□ -0.46
HMGXB4-206ENST00000466438 KLHL22Q53GT1 634 aa12.16□□□□□ -0.46
HMGXB4-206ENST00000466438 CLEC12AQ5QGZ9 265 aa12.16□□□□□ -0.46
HMGXB4-206ENST00000466438 C6orf141Q5SZD1 244 aa12.16□□□□□ -0.46
HMGXB4-206ENST00000466438 MEDAGQ5VYS4 303 aa12.16□□□□□ -0.46
HMGXB4-206ENST00000466438 TMEM236Q5W0B7 351 aa12.16□□□□□ -0.46
HMGXB4-206ENST00000466438 OR8D4Q8NGM9 314 aa12.16□□□□□ -0.46
HMGXB4-206ENST00000466438 OR51A7Q8NH64 312 aa12.16□□□□□ -0.46
HMGXB4-206ENST00000466438 TMEM54Q969K7 222 aa12.16□□□□□ -0.46
HMGXB4-206ENST00000466438 ZNF566Q969W8 418 aa12.16□□□□□ -0.46
HMGXB4-206ENST00000466438 IFT27Q9BW83 186 aa12.16□□□□□ -0.46
HMGXB4-206ENST00000466438 CLN6Q9NWW5 311 aa12.16□□□□□ -0.46
HMGXB4-206ENST00000466438 SCN3BQ9NY72 215 aa12.16□□□□□ -0.46
HMGXB4-206ENST00000466438 GLTPQ9NZD2 209 aa12.16□□□□□ -0.46
HMGXB4-206ENST00000466438 CLN8Q9UBY8 286 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms