RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 ZNF254O75437 659 aa14.95□□□□□ -0.02
VPS52-214ENST00000463486 APOL3O95236 402 aa14.95□□□□□ -0.02
VPS52-214ENST00000463486 PNPP00491 289 aa14.95□□□□□ -0.02
VPS52-214ENST00000463486 HLA-DPB1P04440 258 aa14.95□□□□□ -0.02
VPS52-214ENST00000463486 PEX2P28328 305 aa14.95□□□□□ -0.02
VPS52-214ENST00000463486 CXCR4P61073 352 aa14.95□□□□□ -0.02
VPS52-214ENST00000463486 MAB21L1Q13394 359 aa14.95□□□□□ -0.02
VPS52-214ENST00000463486 LRRC36Q1X8D7 754 aa14.95□□□□□ -0.02
VPS52-214ENST00000463486 OGFRL1Q5TC84 451 aaPredicted RBP14.95□□□□□ -0.02
VPS52-214ENST00000463486 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.95□□□□□ -0.02
VPS52-214ENST00000463486 GALNT4Q8N4A0 578 aa14.95□□□□□ -0.02
VPS52-214ENST00000463486 ITLN1Q8WWA0 313 aa14.95□□□□□ -0.02
VPS52-214ENST00000463486 REEP6Q96HR9 211 aa14.95□□□□□ -0.02
VPS52-214ENST00000463486 MEGF10Q96KG7 1140 aa14.95□□□□□ -0.02
VPS52-214ENST00000463486 LYZL4Q96KX0 146 aa14.95□□□□□ -0.02
VPS52-214ENST00000463486 RDH12Q96NR8 316 aa14.95□□□□□ -0.02
VPS52-214ENST00000463486 OR2V2Q96R30 315 aa14.95□□□□□ -0.02
VPS52-214ENST00000463486 APOL4Q9BPW4 351 aa14.95□□□□□ -0.02
VPS52-214ENST00000463486 TTTY10Q9BZA0 68 aa14.95□□□□□ -0.02
VPS52-214ENST00000463486 SP140LQ9H930 580 aa14.95□□□□□ -0.02
VPS52-214ENST00000463486 BRD7Q9NPI1 651 aa14.95□□□□□ -0.02
VPS52-214ENST00000463486 SMPD3Q9NY59 655 aaPredicted RBP14.95□□□□□ -0.02
VPS52-214ENST00000463486 NKX1-2Q9UD57 310 aaPredicted RBP14.95□□□□□ -0.02
VPS52-214ENST00000463486 MRM2Q9UI43 246 aaKnown RBP14.95□□□□□ -0.02
VPS52-214ENST00000463486 TANC2Q9HCD6 1990 aa14.94□□□□□ -0.02
VPS52-214ENST00000463486 A0A1W2PQL4 384 aaPredicted RBP14.94□□□□□ -0.02
VPS52-214ENST00000463486 ACOD1A6NK06 481 aa14.94□□□□□ -0.02
VPS52-214ENST00000463486 TPD52L2O43399 206 aaKnown RBP14.94□□□□□ -0.02
VPS52-214ENST00000463486 CD5LO43866 347 aa14.94□□□□□ -0.02
VPS52-214ENST00000463486 IGLV3-1P01715 115 aa14.94□□□□□ -0.02
VPS52-214ENST00000463486 OR2T7P0C7T2 308 aa14.94□□□□□ -0.02
VPS52-214ENST00000463486 PMELP40967 661 aa14.94□□□□□ -0.02
VPS52-214ENST00000463486 GPR6P46095 362 aaPredicted RBP14.94□□□□□ -0.02
VPS52-214ENST00000463486 GSK3AP49840 483 aa14.94□□□□□ -0.02
VPS52-214ENST00000463486 MMP16P51512 607 aa14.94□□□□□ -0.02
VPS52-214ENST00000463486 POU4F2Q12837 409 aa14.94□□□□□ -0.02
VPS52-214ENST00000463486 MEDAGQ5VYS4 303 aa14.94□□□□□ -0.02
VPS52-214ENST00000463486 PACRGLQ8N7B6 248 aa14.94□□□□□ -0.02
VPS52-214ENST00000463486 OR8B12Q8NGG6 310 aa14.94□□□□□ -0.02
VPS52-214ENST00000463486 OR56B2PQ8NGI1 322 aa14.94□□□□□ -0.02
VPS52-214ENST00000463486 OR2T27Q8NH04 317 aa14.94□□□□□ -0.02
VPS52-214ENST00000463486 APH1BQ8WW43 257 aa14.94□□□□□ -0.02
VPS52-214ENST00000463486 SPRYD4Q8WW59 207 aaPredicted RBP14.94□□□□□ -0.02
VPS52-214ENST00000463486 CCL17Q92583 94 aa14.94□□□□□ -0.02
VPS52-214ENST00000463486 RFKQ969G6 155 aa14.94□□□□□ -0.02
VPS52-214ENST00000463486 PPP1R14AQ96A00 147 aa14.94□□□□□ -0.02
VPS52-214ENST00000463486 RNF166Q96A37 237 aaPredicted RBP14.94□□□□□ -0.02
VPS52-214ENST00000463486 SIGLEC11Q96RL6 698 aa14.94□□□□□ -0.02
VPS52-214ENST00000463486 MROQ9BYG7 248 aa14.94□□□□□ -0.02
VPS52-214ENST00000463486 OPA3Q9H6K4 179 aa14.94□□□□□ -0.02
VPS52-214ENST00000463486 GCM1Q9NP62 436 aa14.94□□□□□ -0.02
VPS52-214ENST00000463486 MRPL15Q9P015 296 aaKnown RBP14.94□□□□□ -0.02
VPS52-214ENST00000463486 MALRD1Q5VYJ5 2156 aa14.94□□□□□ -0.02
VPS52-214ENST00000463486 DYSFO75923 2080 aa14.93□□□□□ -0.02
VPS52-214ENST00000463486 ERICH4A6NGS2 130 aa14.93□□□□□ -0.02
VPS52-214ENST00000463486 TBX1O43435 398 aa14.93□□□□□ -0.02
VPS52-214ENST00000463486 PPIHO43447 177 aaKnown RBP14.93□□□□□ -0.02
VPS52-214ENST00000463486 PTBP3O95758 552 aaKnown RBP14.93□□□□□ -0.02
VPS52-214ENST00000463486 CA6P23280 308 aa14.93□□□□□ -0.02
VPS52-214ENST00000463486 ACKR3P25106 362 aa14.93□□□□□ -0.02
VPS52-214ENST00000463486 DDOSTP39656 456 aa14.93□□□□□ -0.02
VPS52-214ENST00000463486 MTNR1AP48039 350 aa14.93□□□□□ -0.02
VPS52-214ENST00000463486 LMO4P61968 165 aa14.93□□□□□ -0.02
VPS52-214ENST00000463486 EGR3Q06889 387 aa14.93□□□□□ -0.02
VPS52-214ENST00000463486 MFGE8Q08431 387 aaPredicted RBP14.93□□□□□ -0.02
VPS52-214ENST00000463486 OR8B8Q15620 311 aa14.93□□□□□ -0.02
VPS52-214ENST00000463486 HFEQ30201 348 aa14.93□□□□□ -0.02
VPS52-214ENST00000463486 KRT74Q7RTS7 529 aa14.93□□□□□ -0.02
VPS52-214ENST00000463486 PGAM5Q96HS1 289 aa14.93□□□□□ -0.02
VPS52-214ENST00000463486 OR10A2Q9H208 303 aa14.93□□□□□ -0.02
VPS52-214ENST00000463486 RGCCQ9H4X1 137 aa14.93□□□□□ -0.02
VPS52-214ENST00000463486 PPP1R3EQ9H7J1 279 aa14.93□□□□□ -0.02
VPS52-214ENST00000463486 G6PC2Q9NQR9 355 aa14.93□□□□□ -0.02
VPS52-214ENST00000463486 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.93□□□□□ -0.02
VPS52-214ENST00000463486 MXRA5Q9NR99 2828 aa14.93□□□□□ -0.02
VPS52-214ENST00000463486 JMJD1CQ15652 2540 aa14.92□□□□□ -0.02
VPS52-214ENST00000463486 TMEM269A0A1B0GVZ9 245 aa14.92□□□□□ -0.02
VPS52-214ENST00000463486 GGT3PA6NGU5 568 aa14.92□□□□□ -0.02
VPS52-214ENST00000463486 ZNF670-ZNF695F2Z2N8 137 aa14.92□□□□□ -0.02
VPS52-214ENST00000463486 PHYHO14832 338 aa14.92□□□□□ -0.02
VPS52-214ENST00000463486 WBP4O75554 376 aaKnown RBP14.92□□□□□ -0.02
VPS52-214ENST00000463486 TNFRSF1AP19438 455 aa14.92□□□□□ -0.02
VPS52-214ENST00000463486 TNFSF4P23510 183 aa14.92□□□□□ -0.02
VPS52-214ENST00000463486 CD200P41217 278 aa14.92□□□□□ -0.02
VPS52-214ENST00000463486 GATA4P43694 442 aa14.92□□□□□ -0.02
VPS52-214ENST00000463486 ISL1P61371 349 aa14.92□□□□□ -0.02
VPS52-214ENST00000463486 ADARB1P78563 741 aaKnown RBP14.92□□□□□ -0.02
VPS52-214ENST00000463486 ZNF85Q03923 595 aa14.92□□□□□ -0.02
VPS52-214ENST00000463486 TIGD6Q17RP2 521 aa14.92□□□□□ -0.02
VPS52-214ENST00000463486 AVPI1Q5T686 147 aa14.92□□□□□ -0.02
VPS52-214ENST00000463486 CLDND2Q8NHS1 167 aa14.92□□□□□ -0.02
VPS52-214ENST00000463486 HPS1Q92902 700 aa14.92□□□□□ -0.02
VPS52-214ENST00000463486 MSI2Q96DH6 328 aaKnown RBP14.92□□□□□ -0.02
VPS52-214ENST00000463486 TBX5Q99593 518 aa14.92□□□□□ -0.02
VPS52-214ENST00000463486 DCLRE1BQ9H816 532 aa14.92□□□□□ -0.02
VPS52-214ENST00000463486 C8orf4Q9NR00 106 aa14.92□□□□□ -0.02
VPS52-214ENST00000463486 TMEM106BQ9NUM4 274 aa14.92□□□□□ -0.02
VPS52-214ENST00000463486 NUFIP1Q9UHK0 495 aaKnown RBP14.92□□□□□ -0.02
VPS52-214ENST00000463486 PPP1R3CQ9UQK1 317 aa14.92□□□□□ -0.02
VPS52-214ENST00000463486 EXOGQ9Y2C4 368 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms