RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 C15orf40Q8WUR7 153 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 ING5Q8WYH8 240 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 RBMXL1Q96E39 390 aaKnown RBP2.03□□□□□ -2.08
VCL-203ENST00000461383 SIKE1Q9BRV8 207 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 TM6SF2Q9BZW4 377 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 PRSS16Q9NQE7 514 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 RRAGDQ9NQL2 400 aaPredicted RBP2.03□□□□□ -2.08
VCL-203ENST00000461383 SLC17A7Q9P2U7 560 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 ZMAT5Q9UDW3 170 aaKnown RBP2.03□□□□□ -2.08
VCL-203ENST00000461383 STK38LQ9Y2H1 464 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 COMMD3-BMI1R4GMX3 469 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 COL16A1Q07092 1604 aaPredicted RBP2.02□□□□□ -2.09
VCL-203ENST00000461383 GPATCH8Q9UKJ3 1502 aaKnown RBP2.02□□□□□ -2.09
VCL-203ENST00000461383 PCDH11XQ9BZA7 1347 aa2.02□□□□□ -2.09
VCL-203ENST00000461383 IGKV2D-24A0A075B6R9 120 aa2.02□□□□□ -2.09
VCL-203ENST00000461383 TMEM223A0PJW6 202 aa2.02□□□□□ -2.09
VCL-203ENST00000461383 DNASE2O00115 360 aaPredicted RBP2.02□□□□□ -2.09
VCL-203ENST00000461383 NDUFS8O00217 210 aa2.02□□□□□ -2.09
VCL-203ENST00000461383 RAD1O60671 282 aa2.02□□□□□ -2.09
VCL-203ENST00000461383 PTHP01270 115 aa2.02□□□□□ -2.09
VCL-203ENST00000461383 APCSP02743 223 aa2.02□□□□□ -2.09
VCL-203ENST00000461383 DCNP07585 359 aaKnown RBP2.02□□□□□ -2.09
VCL-203ENST00000461383 ADRA2AP08913 450 aa2.02□□□□□ -2.09
VCL-203ENST00000461383 ZNF688P0C7X2 276 aa2.02□□□□□ -2.09
VCL-203ENST00000461383 CSKP41240 450 aa2.02□□□□□ -2.09
VCL-203ENST00000461383 NDUFA8P51970 172 aa2.02□□□□□ -2.09
VCL-203ENST00000461383 PFN3P60673 137 aa2.02□□□□□ -2.09
VCL-203ENST00000461383 PSMC5P62195 406 aa2.02□□□□□ -2.09
VCL-203ENST00000461383 ESRRGP62508 458 aa2.02□□□□□ -2.09
VCL-203ENST00000461383 CDK5Q00535 292 aa2.02□□□□□ -2.09
VCL-203ENST00000461383 KDSRQ06136 332 aa2.02□□□□□ -2.09
VCL-203ENST00000461383 STK11Q15831 433 aa2.02□□□□□ -2.09
VCL-203ENST00000461383 MPV17L2Q567V2 206 aa2.02□□□□□ -2.09
VCL-203ENST00000461383 SLC25A25Q6KCM7 469 aa2.02□□□□□ -2.09
VCL-203ENST00000461383 TMPRSS11AQ6ZMR5 421 aa2.02□□□□□ -2.09
VCL-203ENST00000461383 NDUFAF7Q7L592 441 aa2.02□□□□□ -2.09
VCL-203ENST00000461383 MDP1Q86V88 176 aa2.02□□□□□ -2.09
VCL-203ENST00000461383 SAXO1Q8IYX7 474 aa2.02□□□□□ -2.09
VCL-203ENST00000461383 LGI3Q8N145 548 aa2.02□□□□□ -2.09
VCL-203ENST00000461383 FAM58AQ8N1B3 248 aa2.02□□□□□ -2.09
VCL-203ENST00000461383 TRIML2Q8N7C3 387 aa2.02□□□□□ -2.09
VCL-203ENST00000461383 OR10W1Q8NGF6 305 aa2.02□□□□□ -2.09
VCL-203ENST00000461383 RNF170Q96K19 258 aa2.02□□□□□ -2.09
VCL-203ENST00000461383 ZNF285Q96NJ3 590 aa2.02□□□□□ -2.09
VCL-203ENST00000461383 TOLLIPQ9H0E2 274 aa2.02□□□□□ -2.09
VCL-203ENST00000461383 REEP1Q9H902 201 aa2.02□□□□□ -2.09
VCL-203ENST00000461383 ZNF355PQ9NSJ1 428 aa2.02□□□□□ -2.09
VCL-203ENST00000461383 ENOPH1Q9UHY7 261 aa2.02□□□□□ -2.09
VCL-203ENST00000461383 UBIAD1Q9Y5Z9 338 aa2.02□□□□□ -2.09
VCL-203ENST00000461383 BAZ2AQ9UIF9 1905 aaKnown RBP2.01□□□□□ -2.09
VCL-203ENST00000461383 IGKV6D-21A0A0A0MT36 114 aa2.01□□□□□ -2.09
VCL-203ENST00000461383 IGHV1OR15-9A0A0B4J2B8 117 aa2.01□□□□□ -2.09
VCL-203ENST00000461383 ZNF705GA8MUZ8 300 aaPredicted RBP2.01□□□□□ -2.09
VCL-203ENST00000461383 BOLA2-SMG1P6H3BVE0 249 aa2.01□□□□□ -2.09
VCL-203ENST00000461383 DFFAO00273 331 aa2.01□□□□□ -2.09
VCL-203ENST00000461383 RBFOX2O43251 390 aaKnown RBP eCLIP2.01□□□□□ -2.09
VCL-203ENST00000461383 KDELR3O43731 214 aa2.01□□□□□ -2.09
VCL-203ENST00000461383 SPOPO43791 374 aa2.01□□□□□ -2.09
VCL-203ENST00000461383 EIF1BO60739 113 aaKnown RBP2.01□□□□□ -2.09
VCL-203ENST00000461383 REM1O75628 298 aa2.01□□□□□ -2.09
VCL-203ENST00000461383 YIF1AO95070 293 aa2.01□□□□□ -2.09
VCL-203ENST00000461383 PLEKHA8P1O95397 391 aa2.01□□□□□ -2.09
VCL-203ENST00000461383 GCGP01275 180 aa2.01□□□□□ -2.09
VCL-203ENST00000461383 TACSTD2P09758 323 aa2.01□□□□□ -2.09
VCL-203ENST00000461383 ZNF806P0C7X5 589 aa2.01□□□□□ -2.09
VCL-203ENST00000461383 DEKP35659 375 aaKnown RBP2.01□□□□□ -2.09
VCL-203ENST00000461383 ARR3P36575 388 aa2.01□□□□□ -2.09
VCL-203ENST00000461383 MYCNOSP40205 109 aa2.01□□□□□ -2.09
VCL-203ENST00000461383 EIF1P41567 113 aaKnown RBP2.01□□□□□ -2.09
VCL-203ENST00000461383 CCNG1P51959 295 aa2.01□□□□□ -2.09
VCL-203ENST00000461383 OR2B8PP59922 312 aa2.01□□□□□ -2.09
VCL-203ENST00000461383 SLC35B1P78383 322 aa2.01□□□□□ -2.09
VCL-203ENST00000461383 CRADDP78560 199 aa2.01□□□□□ -2.09
VCL-203ENST00000461383 IFITM3Q01628 133 aa2.01□□□□□ -2.09
VCL-203ENST00000461383 PPIDQ08752 370 aaKnown RBP2.01□□□□□ -2.09
VCL-203ENST00000461383 SYCNQ0VAF6 134 aa2.01□□□□□ -2.09
VCL-203ENST00000461383 NAB1Q13506 487 aa2.01□□□□□ -2.09
VCL-203ENST00000461383 PIGHQ14442 188 aaPredicted RBP2.01□□□□□ -2.09
VCL-203ENST00000461383 ATP6V1FQ16864 119 aa2.01□□□□□ -2.09
VCL-203ENST00000461383 AP1ARQ63HQ0 302 aa2.01□□□□□ -2.09
VCL-203ENST00000461383 FAM71E1Q6IPT2 247 aa2.01□□□□□ -2.09
VCL-203ENST00000461383 LINC00336Q6ZUF6 198 aa2.01□□□□□ -2.09
VCL-203ENST00000461383 CDKL3Q8IVW4 592 aaPredicted RBP2.01□□□□□ -2.09
VCL-203ENST00000461383 TMEM256Q8N2U0 113 aa2.01□□□□□ -2.09
VCL-203ENST00000461383 LINC00469Q8N7U9 141 aa2.01□□□□□ -2.09
VCL-203ENST00000461383 C15orf56Q8N910 161 aa2.01□□□□□ -2.09
VCL-203ENST00000461383 C19orf18Q8NEA5 215 aa2.01□□□□□ -2.09
VCL-203ENST00000461383 OR4K5Q8NGD3 323 aa2.01□□□□□ -2.09
VCL-203ENST00000461383 OR1J4Q8NGS1 313 aa2.01□□□□□ -2.09
VCL-203ENST00000461383 LRRC20Q8TCA0 184 aa2.01□□□□□ -2.09
VCL-203ENST00000461383 RXFP4Q8TDU9 374 aa2.01□□□□□ -2.09
VCL-203ENST00000461383 BAALCQ8WXS3 180 aa2.01□□□□□ -2.09
VCL-203ENST00000461383 OR8D1Q8WZ84 308 aa2.01□□□□□ -2.09
VCL-203ENST00000461383 TFGQ92734 400 aaPredicted RBP2.01□□□□□ -2.09
VCL-203ENST00000461383 CDS1Q92903 461 aa2.01□□□□□ -2.09
VCL-203ENST00000461383 TMEM159Q96B96 161 aa2.01□□□□□ -2.09
VCL-203ENST00000461383 LRRC39Q96DD0 335 aa2.01□□□□□ -2.09
VCL-203ENST00000461383 CFAP53Q96M91 514 aa2.01□□□□□ -2.09
VCL-203ENST00000461383 ZNF488Q96MN9 340 aa2.01□□□□□ -2.09
VCL-203ENST00000461383 TEAD3Q99594 435 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms