RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 KCNJ8Q15842 424 aa13.15□□□□□ -0.3
CHCHD3-204ENST00000457942 FAM98BQ52LJ0 330 aaKnown RBP13.15□□□□□ -0.3
CHCHD3-204ENST00000457942 GLYATL3Q5SZD4 288 aa13.15□□□□□ -0.3
CHCHD3-204ENST00000457942 DRAM2Q6UX65 266 aa13.15□□□□□ -0.3
CHCHD3-204ENST00000457942 ZNF511Q8NB15 262 aa13.15□□□□□ -0.3
CHCHD3-204ENST00000457942 Q8TCH9 128 aa13.15□□□□□ -0.3
CHCHD3-204ENST00000457942 ZNRF4Q8WWF5 429 aa13.15□□□□□ -0.3
CHCHD3-204ENST00000457942 OTULINQ96BN8 352 aa13.15□□□□□ -0.3
CHCHD3-204ENST00000457942 SLAMF6Q96DU3 332 aa13.15□□□□□ -0.3
CHCHD3-204ENST00000457942 LRGUKQ96M69 825 aa13.15□□□□□ -0.3
CHCHD3-204ENST00000457942 NUDT16L1Q9BRJ7 211 aaKnown RBP13.15□□□□□ -0.3
CHCHD3-204ENST00000457942 THTPAQ9BU02 230 aa13.15□□□□□ -0.3
CHCHD3-204ENST00000457942 MUC13Q9H3R2 512 aa13.15□□□□□ -0.3
CHCHD3-204ENST00000457942 MAGIXQ9H6Y5 334 aa13.15□□□□□ -0.3
CHCHD3-204ENST00000457942 ZMAT3Q9HA38 289 aaKnown RBP13.15□□□□□ -0.3
CHCHD3-204ENST00000457942 RNF7Q9UBF6 113 aa13.15□□□□□ -0.3
CHCHD3-204ENST00000457942 BAIAP2Q9UQB8 552 aa13.15□□□□□ -0.3
CHCHD3-204ENST00000457942 NOTCH1P46531 2555 aa13.14□□□□□ -0.31
CHCHD3-204ENST00000457942 A0A1B0GWJ7 208 aa13.14□□□□□ -0.31
CHCHD3-204ENST00000457942 hCG_1807616A0A1W2PRN6 198 aa13.14□□□□□ -0.31
CHCHD3-204ENST00000457942 ZNF878C9JN71 531 aa13.14□□□□□ -0.31
CHCHD3-204ENST00000457942 ZNF593O00488 134 aaPredicted RBP13.14□□□□□ -0.31
CHCHD3-204ENST00000457942 PHYHO14832 338 aa13.14□□□□□ -0.31
CHCHD3-204ENST00000457942 ANXA2P07355 339 aaKnown RBP13.14□□□□□ -0.31
CHCHD3-204ENST00000457942 SPI1P17947 270 aa13.14□□□□□ -0.31
CHCHD3-204ENST00000457942 HSD11B1P28845 292 aa13.14□□□□□ -0.31
CHCHD3-204ENST00000457942 MAGEA2P43356 314 aa13.14□□□□□ -0.31
CHCHD3-204ENST00000457942 SFRP4Q6FHJ7 346 aaPredicted RBP13.14□□□□□ -0.31
CHCHD3-204ENST00000457942 OR2T5Q6IEZ7 315 aa13.14□□□□□ -0.31
CHCHD3-204ENST00000457942 ZNF770Q6IQ21 691 aaPredicted RBP13.14□□□□□ -0.31
CHCHD3-204ENST00000457942 LYPD2Q6UXB3 125 aa13.14□□□□□ -0.31
CHCHD3-204ENST00000457942 ARHGAP24Q8N264 748 aa13.14□□□□□ -0.31
CHCHD3-204ENST00000457942 OR56B2PQ8NGI1 322 aa13.14□□□□□ -0.31
CHCHD3-204ENST00000457942 OR2T29Q8NH02 315 aa13.14□□□□□ -0.31
CHCHD3-204ENST00000457942 OR4Q3Q8NH05 313 aa13.14□□□□□ -0.31
CHCHD3-204ENST00000457942 TEX47Q8TBZ9 253 aa13.14□□□□□ -0.31
CHCHD3-204ENST00000457942 ZNF48Q96MX3 618 aaPredicted RBP13.14□□□□□ -0.31
CHCHD3-204ENST00000457942 KCNJ15Q99712 375 aa13.14□□□□□ -0.31
CHCHD3-204ENST00000457942 TCRBV5S2A0A599 114 aa13.13□□□□□ -0.31
CHCHD3-204ENST00000457942 C3orf80F5H4A9 247 aa13.13□□□□□ -0.31
CHCHD3-204ENST00000457942 H3BN98 237 aa13.13□□□□□ -0.31
CHCHD3-204ENST00000457942 GMDSO60547 372 aa13.13□□□□□ -0.31
CHCHD3-204ENST00000457942 GRPP07492 148 aa13.13□□□□□ -0.31
CHCHD3-204ENST00000457942 CLUP10909 449 aa13.13□□□□□ -0.31
CHCHD3-204ENST00000457942 PSKH1P11801 424 aa13.13□□□□□ -0.31
CHCHD3-204ENST00000457942 SLC15A1P46059 708 aa13.13□□□□□ -0.31
CHCHD3-204ENST00000457942 CX3CR1P49238 355 aa13.13□□□□□ -0.31
CHCHD3-204ENST00000457942 HOXA4Q00056 320 aaPredicted RBP13.13□□□□□ -0.31
CHCHD3-204ENST00000457942 MS4A2Q01362 244 aa13.13□□□□□ -0.31
CHCHD3-204ENST00000457942 MZT1Q08AG7 82 aa13.13□□□□□ -0.31
CHCHD3-204ENST00000457942 EIF2B1Q14232 305 aaKnown RBP13.13□□□□□ -0.31
CHCHD3-204ENST00000457942 TIGD6Q17RP2 521 aa13.13□□□□□ -0.31
CHCHD3-204ENST00000457942 MICAQ29983 383 aa13.13□□□□□ -0.31
CHCHD3-204ENST00000457942 WDR25Q64LD2 544 aaPredicted RBP13.13□□□□□ -0.31
CHCHD3-204ENST00000457942 LCN8Q6JVE9 175 aa13.13□□□□□ -0.31
CHCHD3-204ENST00000457942 OR10G2Q8NGC3 310 aa13.13□□□□□ -0.31
CHCHD3-204ENST00000457942 OR6N2Q8NGY6 317 aa13.13□□□□□ -0.31
CHCHD3-204ENST00000457942 SLC25A28Q96A46 364 aa13.13□□□□□ -0.31
CHCHD3-204ENST00000457942 UPRTQ96BW1 309 aa13.13□□□□□ -0.31
CHCHD3-204ENST00000457942 DDOQ99489 341 aa13.13□□□□□ -0.31
CHCHD3-204ENST00000457942 OPA3Q9H6K4 179 aa13.13□□□□□ -0.31
CHCHD3-204ENST00000457942 C1orf123Q9NWV4 160 aa13.13□□□□□ -0.31
CHCHD3-204ENST00000457942 VNN3Q9NY84 501 aa13.13□□□□□ -0.31
CHCHD3-204ENST00000457942 MRPL15Q9P015 296 aaKnown RBP13.13□□□□□ -0.31
CHCHD3-204ENST00000457942 KIF17Q9P2E2 1029 aa13.13□□□□□ -0.31
CHCHD3-204ENST00000457942 ERVK-18Q9QC07 812 aa13.13□□□□□ -0.31
CHCHD3-204ENST00000457942 PRPF19Q9UMS4 504 aaKnown RBP13.13□□□□□ -0.31
CHCHD3-204ENST00000457942 C5orf63A6NC05 138 aa13.12□□□□□ -0.31
CHCHD3-204ENST00000457942 ANKRD30BLA7E2S9 258 aa13.12□□□□□ -0.31
CHCHD3-204ENST00000457942 GYG2O15488 501 aa13.12□□□□□ -0.31
CHCHD3-204ENST00000457942 XRCC2O43543 280 aa13.12□□□□□ -0.31
CHCHD3-204ENST00000457942 ENSAO43768 121 aaKnown RBP13.12□□□□□ -0.31
CHCHD3-204ENST00000457942 FSTL3O95633 263 aa13.12□□□□□ -0.31
CHCHD3-204ENST00000457942 PPIAL4GP0DN37 164 aa13.12□□□□□ -0.31
CHCHD3-204ENST00000457942 OTX1P32242 354 aaPredicted RBP13.12□□□□□ -0.31
CHCHD3-204ENST00000457942 BLVRAP53004 296 aa13.12□□□□□ -0.31
CHCHD3-204ENST00000457942 SLC25A1P53007 311 aa13.12□□□□□ -0.31
CHCHD3-204ENST00000457942 GRB2P62993 217 aaKnown RBP13.12□□□□□ -0.31
CHCHD3-204ENST00000457942 PAX2Q02962 417 aa13.12□□□□□ -0.31
CHCHD3-204ENST00000457942 TRIM25Q14258 630 aaKnown RBP13.12□□□□□ -0.31
CHCHD3-204ENST00000457942 GFOD2Q3B7J2 385 aa13.12□□□□□ -0.31
CHCHD3-204ENST00000457942 ERI1Q8IV48 349 aaKnown RBP13.12□□□□□ -0.31
CHCHD3-204ENST00000457942 SPERTQ8NA61 448 aa13.12□□□□□ -0.31
CHCHD3-204ENST00000457942 OR8S1Q8NH09 359 aa13.12□□□□□ -0.31
CHCHD3-204ENST00000457942 ZDHHC16Q969W1 377 aa13.12□□□□□ -0.31
CHCHD3-204ENST00000457942 SLC7A6OSQ96CW6 309 aaPredicted RBP13.12□□□□□ -0.31
CHCHD3-204ENST00000457942 DGCR6LQ9BY27 220 aa13.12□□□□□ -0.31
CHCHD3-204ENST00000457942 TRIM36Q9NQ86 728 aa13.12□□□□□ -0.31
CHCHD3-204ENST00000457942 C14orf119Q9NWQ9 140 aa13.12□□□□□ -0.31
CHCHD3-204ENST00000457942 DNAJC27Q9NZQ0 273 aa13.12□□□□□ -0.31
CHCHD3-204ENST00000457942 TRAV38-1A0A0B4J264 116 aa13.11□□□□□ -0.31
CHCHD3-204ENST00000457942 KIR2DS1A0A191URI9 304 aa13.11□□□□□ -0.31
CHCHD3-204ENST00000457942 DHRS12A0PJE2 317 aa13.11□□□□□ -0.31
CHCHD3-204ENST00000457942 LGALS8O00214 317 aa13.11□□□□□ -0.31
CHCHD3-204ENST00000457942 ADAM20O43506 726 aa13.11□□□□□ -0.31
CHCHD3-204ENST00000457942 ANOS1P23352 680 aa13.11□□□□□ -0.31
CHCHD3-204ENST00000457942 NPY4RP50391 375 aa13.11□□□□□ -0.31
CHCHD3-204ENST00000457942 FGF12P61328 243 aa13.11□□□□□ -0.31
CHCHD3-204ENST00000457942 ZNF362Q5T0B9 420 aaPredicted RBP13.11□□□□□ -0.31
CHCHD3-204ENST00000457942 GPR157Q5UAW9 335 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms