RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 GGNBP1Q5YKI7 109 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 FIGLAQ6QHK4 219 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 NPEPL1Q8NDH3 523 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 FAM110BQ8TC76 370 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 MAP1LC3CQ9BXW4 147 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 COMMD5Q9GZQ3 224 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 RAB6CQ9H0N0 254 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 TXNIPQ9H3M7 391 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 WSB1Q9Y6I7 421 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 IGKV6D-21A0A0A0MT36 114 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 PQLC2LA1A4F0 135 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 SH2D1BO14796 132 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 KLF7O75840 302 aaPredicted RBP4.75□□□□□ -1.65
CSMD3-204ENST00000455883 SOD1P00441 154 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 FUT6P51993 359 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 SAXO2Q658L1 398 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 AMMECR1LQ6DCA0 310 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 NUDT22Q9BRQ3 303 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 SYT11Q9BT88 431 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 DDX31Q9H8H2 851 aaKnown RBP4.75□□□□□ -1.65
CSMD3-204ENST00000455883 GLRX2Q9NS18 164 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 WASHC3Q9Y3C0 194 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 ZNF106Q9H2Y7 1883 aaKnown RBP4.75□□□□□ -1.65
CSMD3-204ENST00000455883 FAM90A26D6RGX4 464 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 LDB2O43679 373 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 NTSR1P30989 418 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 ARSIQ5FYB1 569 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 MRGPRGQ86SM5 289 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 POM121L2Q96KW2 1035 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 MMP28Q9H239 520 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 FLVCR1Q9Y5Y0 555 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 MBLAC1A4D2B0 266 aaPredicted RBP4.75□□□□□ -1.65
CSMD3-204ENST00000455883 ZNF724A8MTY0 619 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 H3BMH7 237 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 SLC17A2O00624 439 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 OPN1LWP04000 364 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 TNFRSF1AP19438 455 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 SOX10P56693 466 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 JOSD1Q15040 202 aaPredicted RBP4.75□□□□□ -1.65
CSMD3-204ENST00000455883 PRR27Q6MZM9 219 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 TOMM20LQ6UXN7 152 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 DIO2Q92813 273 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 MOB4Q9Y3A3 225 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 B3GALT1Q9Y5Z6 326 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 JMJD1CQ15652 2540 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 IGLV3-10A0A075B6K4 115 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 ANKRD20A5PA0PJZ0 165 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 MAP1LC3B2A6NCE7 125 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 SERINC4A6NH21 518 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 PPP1R3DO95685 299 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 HMGN2P05204 90 aaKnown RBP4.75□□□□□ -1.65
CSMD3-204ENST00000455883 GNG4P50150 75 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 NHLH2Q02577 135 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 H1FOOQ8IZA3 346 aaPredicted RBP4.75□□□□□ -1.65
CSMD3-204ENST00000455883 WDR83Q9BRX9 315 aaKnown RBP4.75□□□□□ -1.65
CSMD3-204ENST00000455883 ULBP2Q9BZM5 246 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 MAP1LC3BQ9GZQ8 125 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 BCAS3Q9H6U6 928 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 ZNF552Q9H707 407 aaPredicted RBP4.75□□□□□ -1.65
CSMD3-204ENST00000455883 LIN28AQ9H9Z2 209 aaKnown RBP4.75□□□□□ -1.65
CSMD3-204ENST00000455883 IER3IP1Q9Y5U9 82 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 HS3ST3A1Q9Y663 406 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 IGSF23A1L1A6 192 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 M0R2Z0 102 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 ACOT8O14734 319 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 HPP00738 406 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 FOXK2Q01167 660 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 GAMTQ14353 236 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 EML3Q32P44 896 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 ZNF547Q8IVP9 402 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 OR5B3Q8NH48 314 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 RPL10LQ96L21 214 aaKnown RBP4.75□□□□□ -1.65
CSMD3-204ENST00000455883 SGPP1Q9BX95 441 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 R4GMQ9 66 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 PCNX3Q9H6A9 2034 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 NPIPB8E9PQR5 432 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 CORTO00230 105 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 TERTO14746 1132 aaKnown RBP4.75□□□□□ -1.65
CSMD3-204ENST00000455883 GPANK1O95872 356 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 CA3P07451 260 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 GJA4P35212 333 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 ADRA1AP35348 466 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 SELENOTP62341 195 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 CLDN19Q8N6F1 224 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 NFAM1Q8NET5 270 aaPredicted RBP4.75□□□□□ -1.65
CSMD3-204ENST00000455883 OR10A7Q8NGE5 316 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 OR1L4Q8NGR5 311 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 RTN4IP1Q8WWV3 396 aaPredicted RBP4.75□□□□□ -1.65
CSMD3-204ENST00000455883 HRASLSQ9HDD0 168 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 CGGBP1Q9UFW8 167 aaPredicted RBP4.75□□□□□ -1.65
CSMD3-204ENST00000455883 DSPPQ9NZW4 1301 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 FBXO24O75426 580 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 OR7C1O76099 320 aaPredicted RBP4.75□□□□□ -1.65
CSMD3-204ENST00000455883 OR5G3P0C626 314 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 FABP2P12104 132 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 CD80P33681 288 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 SFRP2Q96HF1 295 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 AKR1E2Q96JD6 320 aa4.75□□□□□ -1.65
CSMD3-204ENST00000455883 SOX21Q9Y651 276 aaPredicted RBP4.75□□□□□ -1.65
CSMD3-204ENST00000455883 TANC1Q9C0D5 1861 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms