RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 ZNF319Q9P2F9 582 aa12.4□□□□□ -0.42
USE1-202ENST00000445667 KLHDC2Q9Y2U9 406 aa12.4□□□□□ -0.42
USE1-202ENST00000445667 IFNL4K9M1U5 179 aa12.39□□□□□ -0.43
USE1-202ENST00000445667 XRCC2O43543 280 aa12.39□□□□□ -0.43
USE1-202ENST00000445667 PRKYO43930 277 aa12.39□□□□□ -0.43
USE1-202ENST00000445667 MRPL3P09001 348 aaKnown RBP12.39□□□□□ -0.43
USE1-202ENST00000445667 THBS2P35442 1172 aa12.39□□□□□ -0.43
USE1-202ENST00000445667 MDH2P40926 338 aaKnown RBP12.39□□□□□ -0.43
USE1-202ENST00000445667 FAM3AP98173 230 aa12.39□□□□□ -0.43
USE1-202ENST00000445667 HOXA4Q00056 320 aaPredicted RBP12.39□□□□□ -0.43
USE1-202ENST00000445667 TIGD6Q17RP2 521 aa12.39□□□□□ -0.43
USE1-202ENST00000445667 GFOD2Q3B7J2 385 aa12.39□□□□□ -0.43
USE1-202ENST00000445667 DCAF12L2Q5VW00 463 aa12.39□□□□□ -0.43
USE1-202ENST00000445667 KDM4DQ6B0I6 523 aa12.39□□□□□ -0.43
USE1-202ENST00000445667 LRRN1Q6UXK5 716 aa12.39□□□□□ -0.43
USE1-202ENST00000445667 RHOUQ7L0Q8 258 aa12.39□□□□□ -0.43
USE1-202ENST00000445667 SLC16A9Q7RTY1 509 aa12.39□□□□□ -0.43
USE1-202ENST00000445667 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.39□□□□□ -0.43
USE1-202ENST00000445667 ZDHHC13Q8IUH4 622 aa12.39□□□□□ -0.43
USE1-202ENST00000445667 ZNF454Q8N9F8 522 aa12.39□□□□□ -0.43
USE1-202ENST00000445667 SPSB4Q96A44 273 aa12.39□□□□□ -0.43
USE1-202ENST00000445667 REEP6Q96HR9 211 aa12.39□□□□□ -0.43
USE1-202ENST00000445667 ADAT1Q9BUB4 502 aaKnown RBP12.39□□□□□ -0.43
USE1-202ENST00000445667 TMPRSS13Q9BYE2 586 aa12.39□□□□□ -0.43
USE1-202ENST00000445667 METTL17Q9H7H0 456 aaPredicted RBP12.39□□□□□ -0.43
USE1-202ENST00000445667 TMEM165Q9HC07 324 aa12.39□□□□□ -0.43
USE1-202ENST00000445667 LOC105371242A0A075B767 164 aa12.38□□□□□ -0.43
USE1-202ENST00000445667 A0A0G2JMP0 313 aa12.38□□□□□ -0.43
USE1-202ENST00000445667 A0A0X1KG70 313 aa12.38□□□□□ -0.43
USE1-202ENST00000445667 CCDC182A6NF36 153 aa12.38□□□□□ -0.43
USE1-202ENST00000445667 CEACAM18A8MTB9 384 aa12.38□□□□□ -0.43
USE1-202ENST00000445667 GMDSO60547 372 aa12.38□□□□□ -0.43
USE1-202ENST00000445667 FAM20BO75063 409 aa12.38□□□□□ -0.43
USE1-202ENST00000445667 APOC1P02654 83 aa12.38□□□□□ -0.43
USE1-202ENST00000445667 GATA4P43694 442 aa12.38□□□□□ -0.43
USE1-202ENST00000445667 ZNF181Q2M3W8 571 aa12.38□□□□□ -0.43
USE1-202ENST00000445667 CCDC121Q6ZUS5 278 aa12.38□□□□□ -0.43
USE1-202ENST00000445667 CELF2-AS1Q8N7Q2 184 aa12.38□□□□□ -0.43
USE1-202ENST00000445667 TCEANCQ8N8B7 351 aa12.38□□□□□ -0.43
USE1-202ENST00000445667 C19orf18Q8NEA5 215 aa12.38□□□□□ -0.43
USE1-202ENST00000445667 OR4M2Q8NGB6 313 aa12.38□□□□□ -0.43
USE1-202ENST00000445667 PGAM5Q96HS1 289 aa12.38□□□□□ -0.43
USE1-202ENST00000445667 SLC22A4Q9H015 551 aa12.38□□□□□ -0.43
USE1-202ENST00000445667 OPA3Q9H6K4 179 aa12.38□□□□□ -0.43
USE1-202ENST00000445667 SP140LQ9H930 580 aa12.38□□□□□ -0.43
USE1-202ENST00000445667 MRPL15Q9P015 296 aaKnown RBP12.38□□□□□ -0.43
USE1-202ENST00000445667 METRNQ9UJH8 293 aa12.38□□□□□ -0.43
USE1-202ENST00000445667 LAMP5Q9UJQ1 280 aa12.38□□□□□ -0.43
USE1-202ENST00000445667 PPIAL4EA0A075B759 164 aa12.37□□□□□ -0.43
USE1-202ENST00000445667 SAC3D1A6NKF1 404 aa12.37□□□□□ -0.43
USE1-202ENST00000445667 LRRC30A6NM36 301 aa12.37□□□□□ -0.43
USE1-202ENST00000445667 ZAR1LA6NP61 321 aa12.37□□□□□ -0.43
USE1-202ENST00000445667 F5H0A9 414 aaPredicted RBP12.37□□□□□ -0.43
USE1-202ENST00000445667 PPIAL4DF5H284 164 aa12.37□□□□□ -0.43
USE1-202ENST00000445667 PSMD9O00233 223 aa12.37□□□□□ -0.43
USE1-202ENST00000445667 FOXH1O75593 365 aa12.37□□□□□ -0.43
USE1-202ENST00000445667 WNT2P09544 360 aa12.37□□□□□ -0.43
USE1-202ENST00000445667 PPIAL4FP0DN26 164 aa12.37□□□□□ -0.43
USE1-202ENST00000445667 FCGR1AP12314 374 aa12.37□□□□□ -0.43
USE1-202ENST00000445667 IRF2P14316 349 aa12.37□□□□□ -0.43
USE1-202ENST00000445667 ADRA2CP18825 462 aa12.37□□□□□ -0.43
USE1-202ENST00000445667 ALOX5APP20292 161 aa12.37□□□□□ -0.43
USE1-202ENST00000445667 POLR2IP36954 125 aaKnown RBP12.37□□□□□ -0.43
USE1-202ENST00000445667 DDOSTP39656 456 aa12.37□□□□□ -0.43
USE1-202ENST00000445667 SLX4IPQ5VYV7 408 aa12.37□□□□□ -0.43
USE1-202ENST00000445667 PHC2Q8IXK0 858 aa12.37□□□□□ -0.43
USE1-202ENST00000445667 C1orf87Q8N0U7 546 aa12.37□□□□□ -0.43
USE1-202ENST00000445667 MUC20Q8N307 709 aaPredicted RBP12.37□□□□□ -0.43
USE1-202ENST00000445667 DEFB108BQ8NET1 73 aa12.37□□□□□ -0.43
USE1-202ENST00000445667 OR11L1Q8NGX0 322 aa12.37□□□□□ -0.43
USE1-202ENST00000445667 Q8TCH9 128 aa12.37□□□□□ -0.43
USE1-202ENST00000445667 PYDC1Q8WXC3 89 aa12.37□□□□□ -0.43
USE1-202ENST00000445667 TMEM158Q8WZ71 300 aa12.37□□□□□ -0.43
USE1-202ENST00000445667 CENPNQ96H22 339 aaPredicted RBP12.37□□□□□ -0.43
USE1-202ENST00000445667 CIB1Q99828 191 aa12.37□□□□□ -0.43
USE1-202ENST00000445667 TMEM246Q9BRR3 403 aa12.37□□□□□ -0.43
USE1-202ENST00000445667 YIPF3Q9GZM5 350 aa12.37□□□□□ -0.43
USE1-202ENST00000445667 GABARAPL1Q9H0R8 117 aa12.37□□□□□ -0.43
USE1-202ENST00000445667 OR10A2Q9H208 303 aa12.37□□□□□ -0.43
USE1-202ENST00000445667 PPP1R3EQ9H7J1 279 aa12.37□□□□□ -0.43
USE1-202ENST00000445667 MMP26Q9NRE1 261 aa12.37□□□□□ -0.43
USE1-202ENST00000445667 OAZ3Q9UMX2 235 aa12.37□□□□□ -0.43
USE1-202ENST00000445667 NOP16Q9Y3C1 178 aaKnown RBP12.37□□□□□ -0.43
USE1-202ENST00000445667 PPIAL4AQ9Y536 164 aa12.37□□□□□ -0.43
USE1-202ENST00000445667 ARHGAP32A7KAX9 2087 aa12.37□□□□□ -0.43
USE1-202ENST00000445667 hCG_38984A0A1B0GV85 526 aa12.36□□□□□ -0.43
USE1-202ENST00000445667 ANKRD30BLA7E2S9 258 aa12.36□□□□□ -0.43
USE1-202ENST00000445667 TRAPPC2LH3BP13 241 aa12.36□□□□□ -0.43
USE1-202ENST00000445667 GRPP07492 148 aa12.36□□□□□ -0.43
USE1-202ENST00000445667 GSK3AP49840 483 aa12.36□□□□□ -0.43
USE1-202ENST00000445667 EFNB1P98172 346 aa12.36□□□□□ -0.43
USE1-202ENST00000445667 KPNB1Q14974 876 aaKnown RBP12.36□□□□□ -0.43
USE1-202ENST00000445667 KRTAP24-1Q3LI83 254 aa12.36□□□□□ -0.43
USE1-202ENST00000445667 C12orf73Q69YU5 71 aa12.36□□□□□ -0.43
USE1-202ENST00000445667 MEPCEQ7L2J0 689 aaKnown RBP12.36□□□□□ -0.43
USE1-202ENST00000445667 KRT77Q7Z794 578 aa12.36□□□□□ -0.43
USE1-202ENST00000445667 BOLLQ8N9W6 283 aaKnown RBP12.36□□□□□ -0.43
USE1-202ENST00000445667 OR52H1Q8NGJ2 320 aa12.36□□□□□ -0.43
USE1-202ENST00000445667 TMEM163Q8TC26 289 aa12.36□□□□□ -0.43
USE1-202ENST00000445667 ERGIC1Q969X5 290 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms