RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 GATSQ8NAP1 163 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 SLC38A9Q8NBW4 561 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 NPEPL1Q8NDH3 523 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 PLPP5Q8NEB5 264 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 SDR9C7Q8NEX9 313 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 OR51L1Q8NGJ5 315 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 OR5J2Q8NH18 312 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 ENKURQ8TC29 256 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 HAVCR2Q8TDQ0 301 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 SMAP2Q8WU79 429 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 ZNRF4Q8WWF5 429 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 GHSRQ92847 366 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 CLDN23Q96B33 292 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 ZNF501Q96CX3 271 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 Q96M85 177 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 FAM210AQ96ND0 272 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 NEDD4LQ96PU5 975 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 GAL3ST4Q96RP7 486 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 NMNAT3Q96T66 252 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 TTYH2Q9BSA4 534 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 ALG12Q9BV10 488 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 TBL1XR1Q9BZK7 514 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 SLC7A5P2Q9GIP4 190 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 WWTR1Q9GZV5 400 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 HDHD2Q9H0R4 259 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 MMP28Q9H239 520 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 LRRN3Q9H3W5 708 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 MARCH7Q9H992 704 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 UBTD1Q9HAC8 227 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 CHMP1AQ9HD42 196 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 NANSQ9NR45 359 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 KLHL1Q9NR64 748 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 ZNF224Q9NZL3 707 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 ABRACLQ9P1F3 81 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 RABL2AQ9UBK7 228 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 DHCR7Q9UBM7 475 aaKnown RBP3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 EXTL2Q9UBQ6 330 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 COPS7AQ9UBW8 275 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 TEKT2Q9UIF3 430 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 GNG8Q9UK08 70 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 ZNF221Q9UK13 617 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 FBXL4Q9UKA2 621 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 ZNF346Q9UL40 294 aaKnown RBP3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 RABL2BQ9UNT1 228 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 RASD1Q9Y272 281 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 B3GALT5Q9Y2C3 310 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 NUP214P35658 2090 aaPredicted RBP3□□□□□ -1.93
HMGB3P11-201ENST00000440127 MYO7AQ13402 2215 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 KIAA0100Q14667 2235 aaKnown RBP3□□□□□ -1.93
HMGB3P11-201ENST00000440127 LRP4O75096 1905 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 TRAV36DV7A0A075B6V5 113 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 TRBV2A0A0J9YWF9 115 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 FAM240BA0A1B0GVZ2 78 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 A0A1W2PPK0 400 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 A0A1W2PPQ1 181 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 A0A1W2PRG6 482 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 ANKRD61A6NGH8 418 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 CENPXA8MT69 81 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 A8MVM7 634 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 ZNF879B4DU55 563 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 SLC33A1O00400 549 aaPredicted RBP3□□□□□ -1.93
HMGB3P11-201ENST00000440127 PHYHO14832 338 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 TFECO14948 347 aaPredicted RBP3□□□□□ -1.93
HMGB3P11-201ENST00000440127 MAGEB4O15481 346 aaPredicted RBP3□□□□□ -1.93
HMGB3P11-201ENST00000440127 FLRT2O43155 660 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 LYRM1O43325 122 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 FADS1O60427 444 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 SELENOFO60613 162 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 ICOSLGO75144 302 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 TRIM3O75382 744 aaPredicted RBP3□□□□□ -1.93
HMGB3P11-201ENST00000440127 NUDT14O95848 222 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 MT-ATP6P00846 226 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 BGLAPP02818 100 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 EIF4EP06730 217 aaKnown RBP3□□□□□ -1.93
HMGB3P11-201ENST00000440127 UCHL1P09936 223 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 RAB40ALP0C0E4 278 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 ASAH2BP0C7U1 165 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 GIMD1P0DJR0 217 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 SRMP19623 302 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 AHCYP23526 432 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 PITPNBP48739 271 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 DHPSP49366 369 aaPredicted RBP3□□□□□ -1.93
HMGB3P11-201ENST00000440127 ARRB1P49407 418 aaPredicted RBP3□□□□□ -1.93
HMGB3P11-201ENST00000440127 P2RX1P51575 399 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 POLR2HP52434 150 aaKnown RBP3□□□□□ -1.93
HMGB3P11-201ENST00000440127 OR10A3P58181 314 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 HILS1P60008 231 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 CSNK2A1P68400 391 aaPredicted RBP3□□□□□ -1.93
HMGB3P11-201ENST00000440127 ACY1Q03154 408 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 RPL18Q07020 188 aaKnown RBP3□□□□□ -1.93
HMGB3P11-201ENST00000440127 MADCAM1Q13477 382 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 CDK5R1Q15078 307 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 EBPQ15125 230 aaKnown RBP3□□□□□ -1.93
HMGB3P11-201ENST00000440127 P2RY14Q15391 338 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 HFEQ30201 348 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 SLC25A35Q3KQZ1 300 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 HSD17B12Q53GQ0 312 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 YIF1BQ5BJH7 314 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 ZNF684Q5T5D7 378 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 LINC01590Q5TEZ4 76 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms