RNA–Protein interactions for RNA: ENST00000439106.5

PRAME-209, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 891 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-209ENST00000439106 WNT2P09544 360 aa11.58□□□□□ -0.56
PRAME-209ENST00000439106 PPIAL4FP0DN26 164 aa11.58□□□□□ -0.56
PRAME-209ENST00000439106 CD80P33681 288 aa11.58□□□□□ -0.56
PRAME-209ENST00000439106 GATA4P43694 442 aa11.58□□□□□ -0.56
PRAME-209ENST00000439106 ZNF121P58317 390 aaPredicted RBP11.58□□□□□ -0.56
PRAME-209ENST00000439106 CDK5Q00535 292 aa11.58□□□□□ -0.56
PRAME-209ENST00000439106 ESCO2Q56NI9 601 aa11.58□□□□□ -0.56
PRAME-209ENST00000439106 ZNF826PQ6ZT77 177 aa11.58□□□□□ -0.56
PRAME-209ENST00000439106 FAM57BQ71RH2 274 aa11.58□□□□□ -0.56
PRAME-209ENST00000439106 KLBQ86Z14 1044 aa11.58□□□□□ -0.56
PRAME-209ENST00000439106 RNF133Q8WVZ7 376 aa11.58□□□□□ -0.56
PRAME-209ENST00000439106 ZNF556Q9HAH1 456 aa11.58□□□□□ -0.56
PRAME-209ENST00000439106 KIF17Q9P2E2 1029 aa11.58□□□□□ -0.56
PRAME-209ENST00000439106 ZNF319Q9P2F9 582 aa11.58□□□□□ -0.56
PRAME-209ENST00000439106 PPIAL4AQ9Y536 164 aa11.58□□□□□ -0.56
PRAME-209ENST00000439106 IGHV3OR16-10A0A075B7F0 116 aa11.57□□□□□ -0.56
PRAME-209ENST00000439106 LRRC30A6NM36 301 aa11.57□□□□□ -0.56
PRAME-209ENST00000439106 XRCC2O43543 280 aa11.57□□□□□ -0.56
PRAME-209ENST00000439106 ANXA8P13928 327 aa11.57□□□□□ -0.56
PRAME-209ENST00000439106 ZNF12P17014 697 aa11.57□□□□□ -0.56
PRAME-209ENST00000439106 PAICSP22234 425 aaKnown RBP11.57□□□□□ -0.56
PRAME-209ENST00000439106 OPRL1P41146 370 aa11.57□□□□□ -0.56
PRAME-209ENST00000439106 DAPP51397 102 aa11.57□□□□□ -0.56
PRAME-209ENST00000439106 BLVRAP53004 296 aa11.57□□□□□ -0.56
PRAME-209ENST00000439106 HCCSP53701 268 aa11.57□□□□□ -0.56
PRAME-209ENST00000439106 RPS7P62081 194 aaKnown RBP11.57□□□□□ -0.56
PRAME-209ENST00000439106 GRB2P62993 217 aaKnown RBP11.57□□□□□ -0.56
PRAME-209ENST00000439106 BNIP1Q12981 228 aa11.57□□□□□ -0.56
PRAME-209ENST00000439106 ZNF154Q13106 437 aa11.57□□□□□ -0.56
PRAME-209ENST00000439106 TIGD6Q17RP2 521 aa11.57□□□□□ -0.56
PRAME-209ENST00000439106 ZNF181Q2M3W8 571 aa11.57□□□□□ -0.56
PRAME-209ENST00000439106 ZNF404Q494X3 552 aa11.57□□□□□ -0.56
PRAME-209ENST00000439106 SFRP4Q6FHJ7 346 aaPredicted RBP11.57□□□□□ -0.56
PRAME-209ENST00000439106 SLC16A9Q7RTY1 509 aa11.57□□□□□ -0.56
PRAME-209ENST00000439106 PRSS45Q7RTY3 260 aa11.57□□□□□ -0.56
PRAME-209ENST00000439106 PAPD5Q8NDF8 572 aaKnown RBP11.57□□□□□ -0.56
PRAME-209ENST00000439106 NANPQ8TBE9 248 aa11.57□□□□□ -0.56
PRAME-209ENST00000439106 SGK3Q96BR1 496 aa11.57□□□□□ -0.56
PRAME-209ENST00000439106 REEP6Q96HR9 211 aa11.57□□□□□ -0.56
PRAME-209ENST00000439106 SSBP3Q9BWW4 388 aaPredicted RBP11.57□□□□□ -0.56
PRAME-209ENST00000439106 TTTY10Q9BZA0 68 aa11.57□□□□□ -0.56
PRAME-209ENST00000439106 YY1AP1Q9H869 796 aa11.57□□□□□ -0.56
PRAME-209ENST00000439106 TVP23BQ9NYZ1 205 aa11.57□□□□□ -0.56
PRAME-209ENST00000439106 LRCH1Q9Y2L9 728 aa11.57□□□□□ -0.56
PRAME-209ENST00000439106 INSIG2Q9Y5U4 225 aa11.57□□□□□ -0.56
PRAME-209ENST00000439106 hCG_38984A0A1B0GV85 526 aa11.56□□□□□ -0.56
PRAME-209ENST00000439106 C3orf80F5H4A9 247 aa11.56□□□□□ -0.56
PRAME-209ENST00000439106 IFNL4K9M1U5 179 aa11.56□□□□□ -0.56
PRAME-209ENST00000439106 PSMD9O00233 223 aa11.56□□□□□ -0.56
PRAME-209ENST00000439106 MITFO75030 526 aaPredicted RBP11.56□□□□□ -0.56
PRAME-209ENST00000439106 GRPP07492 148 aa11.56□□□□□ -0.56
PRAME-209ENST00000439106 LYNP07948 512 aa11.56□□□□□ -0.56
PRAME-209ENST00000439106 MRPL3P09001 348 aaKnown RBP11.56□□□□□ -0.56
PRAME-209ENST00000439106 H2BFMP0C1H6 154 aa11.56□□□□□ -0.56
PRAME-209ENST00000439106 IRF2P14316 349 aa11.56□□□□□ -0.56
PRAME-209ENST00000439106 SLC2A5P22732 501 aa11.56□□□□□ -0.56
PRAME-209ENST00000439106 GATA3P23771 443 aa11.56□□□□□ -0.56
PRAME-209ENST00000439106 SLC15A1P46059 708 aa11.56□□□□□ -0.56
PRAME-209ENST00000439106 GNB2P62879 340 aa11.56□□□□□ -0.56
PRAME-209ENST00000439106 FAM3AP98173 230 aa11.56□□□□□ -0.56
PRAME-209ENST00000439106 ARMCX4Q5H9R4 360 aa11.56□□□□□ -0.56
PRAME-209ENST00000439106 KLF17Q5JT82 389 aaPredicted RBP11.56□□□□□ -0.56
PRAME-209ENST00000439106 LRRN1Q6UXK5 716 aa11.56□□□□□ -0.56
PRAME-209ENST00000439106 SHFQ7M4L6 423 aa11.56□□□□□ -0.56
PRAME-209ENST00000439106 BCDIN3DQ7Z5W3 292 aaKnown RBP11.56□□□□□ -0.56
PRAME-209ENST00000439106 WDR86Q86TI4 376 aa11.56□□□□□ -0.56
PRAME-209ENST00000439106 C1orf87Q8N0U7 546 aa11.56□□□□□ -0.56
PRAME-209ENST00000439106 CELF2-AS1Q8N7Q2 184 aa11.56□□□□□ -0.56
PRAME-209ENST00000439106 OR11L1Q8NGX0 322 aa11.56□□□□□ -0.56
PRAME-209ENST00000439106 OTOSQ8NHW6 89 aa11.56□□□□□ -0.56
PRAME-209ENST00000439106 Q8TCH9 128 aa11.56□□□□□ -0.56
PRAME-209ENST00000439106 ZNF418Q8TF45 676 aaPredicted RBP11.56□□□□□ -0.56
PRAME-209ENST00000439106 THEM6Q8WUY1 208 aa11.56□□□□□ -0.56
PRAME-209ENST00000439106 SPSB4Q96A44 273 aa11.56□□□□□ -0.56
PRAME-209ENST00000439106 PLEKHA8Q96JA3 519 aa11.56□□□□□ -0.56
PRAME-209ENST00000439106 MMADHCQ9H3L0 296 aaPredicted RBP11.56□□□□□ -0.56
PRAME-209ENST00000439106 SLC25A19Q9HC21 320 aa11.56□□□□□ -0.56
PRAME-209ENST00000439106 C1orf123Q9NWV4 160 aa11.56□□□□□ -0.56
PRAME-209ENST00000439106 MRPL15Q9P015 296 aaKnown RBP11.56□□□□□ -0.56
PRAME-209ENST00000439106 CTSZQ9UBR2 303 aa11.56□□□□□ -0.56
PRAME-209ENST00000439106 OR5V1Q9UGF6 321 aa11.56□□□□□ -0.56
PRAME-209ENST00000439106 POLR3KQ9Y2Y1 108 aaPredicted RBP11.56□□□□□ -0.56
PRAME-209ENST00000439106 AUP1Q9Y679 476 aa11.56□□□□□ -0.56
PRAME-209ENST00000439106 PPIAL4CA0A0B4J2A2 164 aa11.55□□□□□ -0.56
PRAME-209ENST00000439106 CCDC182A6NF36 153 aa11.55□□□□□ -0.56
PRAME-209ENST00000439106 A6NLC8 198 aa11.55□□□□□ -0.56
PRAME-209ENST00000439106 PRR32B1ATL7 298 aa11.55□□□□□ -0.56
PRAME-209ENST00000439106 GMDSO60547 372 aa11.55□□□□□ -0.56
PRAME-209ENST00000439106 HMGN1P05114 100 aa11.55□□□□□ -0.56
PRAME-209ENST00000439106 EGR1P18146 543 aa11.55□□□□□ -0.56
PRAME-209ENST00000439106 PITPNBP48739 271 aa11.55□□□□□ -0.56
PRAME-209ENST00000439106 CRISP1P54107 249 aa11.55□□□□□ -0.56
PRAME-209ENST00000439106 HILS1P60008 231 aa11.55□□□□□ -0.56
PRAME-209ENST00000439106 ELF3P78545 371 aaPredicted RBP11.55□□□□□ -0.56
PRAME-209ENST00000439106 PAX2Q02962 417 aa11.55□□□□□ -0.56
PRAME-209ENST00000439106 POU4F2Q12837 409 aa11.55□□□□□ -0.56
PRAME-209ENST00000439106 APOFQ13790 326 aa11.55□□□□□ -0.56
PRAME-209ENST00000439106 SNAPC1Q16533 368 aa11.55□□□□□ -0.56
PRAME-209ENST00000439106 BCL6BQ8N143 479 aaPredicted RBP11.55□□□□□ -0.56
PRAME-209ENST00000439106 BPIFB2Q8N4F0 458 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms