RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 DUX4L2P0CJ85 424 aa13.82□□□□□ -0.2
SCARF1-203ENST00000434376 DUX4L3P0CJ86 424 aa13.82□□□□□ -0.2
SCARF1-203ENST00000434376 DUX4L4P0CJ87 422 aa13.82□□□□□ -0.2
SCARF1-203ENST00000434376 DUX4L5P0CJ88 424 aa13.82□□□□□ -0.2
SCARF1-203ENST00000434376 DUX4L6P0CJ89 424 aa13.82□□□□□ -0.2
SCARF1-203ENST00000434376 DUX4L7P0CJ90 424 aa13.82□□□□□ -0.2
SCARF1-203ENST00000434376 RPS19BP1Q86WX3 136 aaKnown RBP13.82□□□□□ -0.2
SCARF1-203ENST00000434376 DUX4Q9UBX2 424 aa13.82□□□□□ -0.2
SCARF1-203ENST00000434376 GLS2Q9UI32 602 aa13.82□□□□□ -0.2
SCARF1-203ENST00000434376 ANKRD20A5PA0PJZ0 165 aa13.81□□□□□ -0.2
SCARF1-203ENST00000434376 NAP1L6A6NFF2 107 aa13.81□□□□□ -0.2
SCARF1-203ENST00000434376 FTCDNL1E5RQL4 147 aa13.81□□□□□ -0.2
SCARF1-203ENST00000434376 NPIPA2E9PIF3 369 aa13.81□□□□□ -0.2
SCARF1-203ENST00000434376 NPIPA3F8WFD2 350 aa13.81□□□□□ -0.2
SCARF1-203ENST00000434376 GLAP06280 429 aa13.81□□□□□ -0.2
SCARF1-203ENST00000434376 PVALBP20472 110 aaPredicted RBP13.81□□□□□ -0.2
SCARF1-203ENST00000434376 DAP3P51398 398 aaKnown RBP13.81□□□□□ -0.2
SCARF1-203ENST00000434376 ZNF121P58317 390 aaPredicted RBP13.81□□□□□ -0.2
SCARF1-203ENST00000434376 RBMS2Q15434 407 aaKnown RBP13.81□□□□□ -0.2
SCARF1-203ENST00000434376 NKAPLQ5M9Q1 402 aa13.81□□□□□ -0.2
SCARF1-203ENST00000434376 GUCD1Q96NT3 240 aa13.81□□□□□ -0.2
SCARF1-203ENST00000434376 PLEK2Q9NYT0 353 aa13.81□□□□□ -0.2
SCARF1-203ENST00000434376 ZNF175Q9Y473 711 aa13.81□□□□□ -0.2
SCARF1-203ENST00000434376 APC2O95996 2303 aa13.81□□□□□ -0.2
SCARF1-203ENST00000434376 C13orf42A0A1B0GVH6 325 aa13.81□□□□□ -0.2
SCARF1-203ENST00000434376 GLSO94925 669 aaPredicted RBP13.81□□□□□ -0.2
SCARF1-203ENST00000434376 CYB5AP00167 134 aa13.81□□□□□ -0.2
SCARF1-203ENST00000434376 FGF2P09038 288 aa13.81□□□□□ -0.2
SCARF1-203ENST00000434376 CD53P19397 219 aa13.81□□□□□ -0.2
SCARF1-203ENST00000434376 EGR3Q06889 387 aa13.81□□□□□ -0.2
SCARF1-203ENST00000434376 PLPPR5Q32ZL2 321 aa13.81□□□□□ -0.2
SCARF1-203ENST00000434376 DNM1P34Q6PK57 102 aa13.81□□□□□ -0.2
SCARF1-203ENST00000434376 OR5M9Q8NGP3 310 aa13.81□□□□□ -0.2
SCARF1-203ENST00000434376 OR10Z1Q8NGY1 313 aa13.81□□□□□ -0.2
SCARF1-203ENST00000434376 PBOV1Q9GZY1 135 aa13.81□□□□□ -0.2
SCARF1-203ENST00000434376 PLA2G3Q9NZ20 509 aa13.81□□□□□ -0.2
SCARF1-203ENST00000434376 PILRBQ9UKJ0 227 aa13.81□□□□□ -0.2
SCARF1-203ENST00000434376 LHX6Q9UPM6 363 aa13.81□□□□□ -0.2
SCARF1-203ENST00000434376 FAM221AA4D161 298 aa13.8□□□□□ -0.2
SCARF1-203ENST00000434376 ZNF98A6NK75 572 aa13.8□□□□□ -0.2
SCARF1-203ENST00000434376 SDCBPO00560 298 aaPredicted RBP13.8□□□□□ -0.2
SCARF1-203ENST00000434376 GSTZ1O43708 216 aaPredicted RBP13.8□□□□□ -0.2
SCARF1-203ENST00000434376 MTRF1O75570 445 aaKnown RBP13.8□□□□□ -0.2
SCARF1-203ENST00000434376 PMP2P02689 132 aa13.8□□□□□ -0.2
SCARF1-203ENST00000434376 JMJD7P0C870 316 aa13.8□□□□□ -0.2
SCARF1-203ENST00000434376 CBR1P16152 277 aa13.8□□□□□ -0.2
SCARF1-203ENST00000434376 CXADRP78310 365 aa13.8□□□□□ -0.2
SCARF1-203ENST00000434376 ARFRP1Q13795 201 aa13.8□□□□□ -0.2
SCARF1-203ENST00000434376 KIAA2026Q5HYC2 2103 aa13.8□□□□□ -0.2
SCARF1-203ENST00000434376 EMC4Q5J8M3 183 aa13.8□□□□□ -0.2
SCARF1-203ENST00000434376 CDCP2Q5VXM1 449 aa13.8□□□□□ -0.2
SCARF1-203ENST00000434376 ZNF441Q8N8Z8 693 aa13.8□□□□□ -0.2
SCARF1-203ENST00000434376 MCHR2Q969V1 340 aa13.8□□□□□ -0.2
SCARF1-203ENST00000434376 ST6GALNAC5Q9BVH7 336 aa13.8□□□□□ -0.2
SCARF1-203ENST00000434376 C1orf198Q9H425 327 aa13.8□□□□□ -0.2
SCARF1-203ENST00000434376 POFUT1Q9H488 388 aa13.8□□□□□ -0.2
SCARF1-203ENST00000434376 C19orf25Q9UFG5 118 aaPredicted RBP13.8□□□□□ -0.2
SCARF1-203ENST00000434376 DMXL2Q8TDJ6 3036 aa13.8□□□□□ -0.2
SCARF1-203ENST00000434376 OR2AT4A6NND4 320 aa13.8□□□□□ -0.2
SCARF1-203ENST00000434376 C3orf80F5H4A9 247 aa13.8□□□□□ -0.2
SCARF1-203ENST00000434376 DNASE2O00115 360 aaPredicted RBP13.8□□□□□ -0.2
SCARF1-203ENST00000434376 CRTAPO75718 401 aaPredicted RBP13.8□□□□□ -0.2
SCARF1-203ENST00000434376 APOBEC1P41238 236 aaKnown RBP13.8□□□□□ -0.2
SCARF1-203ENST00000434376 WIPI1Q5MNZ9 446 aaPredicted RBP13.8□□□□□ -0.2
SCARF1-203ENST00000434376 SHEQ5VZ18 495 aa13.8□□□□□ -0.2
SCARF1-203ENST00000434376 SPINK14Q6IE38 97 aa13.8□□□□□ -0.2
SCARF1-203ENST00000434376 STEAP1BQ6NZ63 245 aa13.8□□□□□ -0.2
SCARF1-203ENST00000434376 SPICQ8N5J4 248 aa13.8□□□□□ -0.2
SCARF1-203ENST00000434376 PGAM5Q96HS1 289 aa13.8□□□□□ -0.2
SCARF1-203ENST00000434376 HES7Q9BYE0 225 aa13.8□□□□□ -0.2
SCARF1-203ENST00000434376 RAB33BQ9H082 229 aa13.8□□□□□ -0.2
SCARF1-203ENST00000434376 TREM1Q9NP99 234 aa13.8□□□□□ -0.2
SCARF1-203ENST00000434376 HS3ST3B1Q9Y662 390 aa13.8□□□□□ -0.2
SCARF1-203ENST00000434376 B3GALNT1O75752 331 aa13.8□□□□□ -0.2
SCARF1-203ENST00000434376 LDOC1O95751 146 aaPredicted RBP13.8□□□□□ -0.2
SCARF1-203ENST00000434376 IGHG1P01857 330 aa13.8□□□□□ -0.2
SCARF1-203ENST00000434376 GAAP10253 952 aa13.8□□□□□ -0.2
SCARF1-203ENST00000434376 FAHP16930 419 aa13.8□□□□□ -0.2
SCARF1-203ENST00000434376 COL19A1Q14993 1142 aa13.8□□□□□ -0.2
SCARF1-203ENST00000434376 C3orf33Q6P1S2 294 aa13.8□□□□□ -0.2
SCARF1-203ENST00000434376 C20orf196Q8IYI0 205 aa13.8□□□□□ -0.2
SCARF1-203ENST00000434376 TMEM104Q8NE00 496 aa13.8□□□□□ -0.2
SCARF1-203ENST00000434376 PAQR8Q8TEZ7 354 aa13.8□□□□□ -0.2
SCARF1-203ENST00000434376 PRELID3BQ9Y3B1 194 aa13.8□□□□□ -0.2
SCARF1-203ENST00000434376 PKDREJQ9NTG1 2253 aa13.79□□□□□ -0.2
SCARF1-203ENST00000434376 LOC100289279A0A1B0GTE1 492 aa13.79□□□□□ -0.2
SCARF1-203ENST00000434376 OR2M5A3KFT3 312 aa13.79□□□□□ -0.2
SCARF1-203ENST00000434376 ZNF705EA8MWA4 302 aaPredicted RBP13.79□□□□□ -0.2
SCARF1-203ENST00000434376 EEF1E1-BLOC1S5C9J1V9 151 aa13.79□□□□□ -0.2
SCARF1-203ENST00000434376 TXNDC12O95881 172 aa13.79□□□□□ -0.2
SCARF1-203ENST00000434376 CCL2P13500 99 aa13.79□□□□□ -0.2
SCARF1-203ENST00000434376 SERPINA2P20848 420 aa13.79□□□□□ -0.2
SCARF1-203ENST00000434376 C3AR1Q16581 482 aa13.79□□□□□ -0.2
SCARF1-203ENST00000434376 ARMC10Q8N2F6 343 aa13.79□□□□□ -0.2
SCARF1-203ENST00000434376 TEX19Q8NA77 164 aa13.79□□□□□ -0.2
SCARF1-203ENST00000434376 STEAP2Q8NFT2 490 aa13.79□□□□□ -0.2
SCARF1-203ENST00000434376 PNPLA2Q96AD5 504 aa13.79□□□□□ -0.2
SCARF1-203ENST00000434376 USB1Q9BQ65 265 aaKnown RBP13.79□□□□□ -0.2
SCARF1-203ENST00000434376 R4GMQ9 66 aa13.79□□□□□ -0.2
SCARF1-203ENST00000434376 MUC6Q6W4X9 2439 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms