RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 FBLN5Q9UBX5 448 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 SHPKQ9UHJ6 478 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 OR51B2Q9Y5P1 312 aa4.8□□□□□ -1.64
PTPN4-203ENST00000430976 LRRC30A6NM36 301 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 HSPB2A8KAH6 182 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 GEMIN2O14893 280 aaKnown RBP4.79□□□□□ -1.64
PTPN4-203ENST00000430976 SLC37A4O43826 429 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 IL6RP08887 468 aaPredicted RBP4.79□□□□□ -1.64
PTPN4-203ENST00000430976 OR5H8P0DN80 308 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 HIST1H1EP10412 219 aaKnown RBP4.79□□□□□ -1.64
PTPN4-203ENST00000430976 NFYAP23511 347 aaPredicted RBP4.79□□□□□ -1.64
PTPN4-203ENST00000430976 CLRN1P58418 232 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 CDK5Q00535 292 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 IL13RA2Q14627 380 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 ZBTB6Q15916 424 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 ZNF77Q15935 545 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 HSPB2Q16082 182 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 DCAF4L1Q3SXM0 396 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 AMMECR1LQ6DCA0 310 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 SLCO4C1Q6ZQN7 724 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 TMPRSS11BQ86T26 416 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 HAPLN4Q86UW8 402 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 IL17DQ8TAD2 202 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 FAM213BQ8TBF2 198 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 SARAFQ96BY9 339 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 KLHDC7BQ96G42 594 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 CABLES2Q9BTV7 478 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 OR51E2Q9H255 320 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 POPDC3Q9HBV1 291 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 MRPL16Q9NX20 251 aaKnown RBP4.79□□□□□ -1.64
PTPN4-203ENST00000430976 MRPS17Q9Y2R5 130 aaKnown RBP4.79□□□□□ -1.64
PTPN4-203ENST00000430976 ENTPD2Q9Y5L3 495 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 ERVK-7P63135 1459 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 A0A0J9YW62 118 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 PRSS46E5RG02 174 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 F5H5P2 479 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 LYRM1O43325 122 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 SYNGR4O95473 234 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 CA1P00915 261 aaPredicted RBP4.79□□□□□ -1.64
PTPN4-203ENST00000430976 HLA-HP01893 362 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 FURINP09958 794 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 KITLGP21583 273 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 TIA1P31483 386 aaKnown RBP eCLIP4.79□□□□□ -1.64
PTPN4-203ENST00000430976 CD96P40200 585 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 KIR2DS4P43632 304 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 MTNR1BP49286 362 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 PPOXP50336 477 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 FUT6P51993 359 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 CTBP2P56545 445 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 PCBP4P57723 403 aaKnown RBP4.79□□□□□ -1.64
PTPN4-203ENST00000430976 HSD52Q0P140 79 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 RAB40BQ12829 278 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 ZNF154Q13106 437 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 HES1Q14469 280 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 PRICKLE4Q2TBC4 344 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 METRNLQ641Q3 311 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 FER1L6-AS1Q8NA97 138 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 OR8B12Q8NGG6 310 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 RAB39BQ96DA2 213 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 UHRF2Q96PU4 802 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 LINC00470Q9BZP3 86 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 FAM124BQ9H5Z6 455 aaPredicted RBP4.79□□□□□ -1.64
PTPN4-203ENST00000430976 HRASLS2Q9NWW9 162 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 ASB6Q9NWX5 421 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 ATP10BO94823 1461 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 ITSN2Q9NZM3 1697 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 MYO5CQ9NQX4 1742 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 AKAP11Q9UKA4 1901 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 GAGE12JA6NER3 117 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 GAGE7O76087 117 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 GAGE12FP0CL80 117 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 GAGE12GP0CL81 117 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 GAGE12IP0CL82 117 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 AK4P27144 223 aaPredicted RBP4.79□□□□□ -1.64
PTPN4-203ENST00000430976 CD34P28906 385 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 SHC1P29353 583 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 ADAM8P78325 824 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 CCL7P80098 99 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 INSM1Q01101 510 aaPredicted RBP4.79□□□□□ -1.64
PTPN4-203ENST00000430976 MFGE8Q08431 387 aaPredicted RBP4.79□□□□□ -1.64
PTPN4-203ENST00000430976 GAGE4Q13068 117 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 VGLL4Q14135 290 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 PEAR1Q5VY43 1037 aaPredicted RBP4.79□□□□□ -1.64
PTPN4-203ENST00000430976 OLFML2AQ68BL7 652 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 DGAT2L7PQ6IED9 249 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 TRMT10BQ6PF06 316 aaKnown RBP4.79□□□□□ -1.64
PTPN4-203ENST00000430976 Q7L0L9 218 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 HSD11B1LQ7Z5J1 315 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 TGIF2LYQ8IUE0 185 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 ACOT4Q8N9L9 421 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 PLPP5Q8NEB5 264 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 OR4D11Q8NGI4 311 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 JSRP1Q96MG2 331 aaPredicted RBP4.79□□□□□ -1.64
PTPN4-203ENST00000430976 PRAP1Q96NZ9 151 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 NDFIP1Q9BT67 221 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 REG4Q9BYZ8 158 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 SLC25A31Q9H0C2 315 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 MED9Q9NWA0 146 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 POMT2Q9UKY4 750 aa4.79□□□□□ -1.64
PTPN4-203ENST00000430976 DIP2CQ9Y2E4 1556 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms