RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 WNK1Q9H4A3 2382 aa12.88□□□□□ -0.35
SEC13-210ENST00000428626 GGT3PA6NGU5 568 aa12.87□□□□□ -0.35
SEC13-210ENST00000428626 LGALS8O00214 317 aa12.87□□□□□ -0.35
SEC13-210ENST00000428626 KRT36O76013 467 aa12.87□□□□□ -0.35
SEC13-210ENST00000428626 SOX14O95416 240 aa12.87□□□□□ -0.35
SEC13-210ENST00000428626 SPARCP09486 303 aa12.87□□□□□ -0.35
SEC13-210ENST00000428626 POU4F2Q12837 409 aa12.87□□□□□ -0.35
SEC13-210ENST00000428626 LINC01590Q5TEZ4 76 aa12.87□□□□□ -0.35
SEC13-210ENST00000428626 C16orf87Q6PH81 154 aa12.87□□□□□ -0.35
SEC13-210ENST00000428626 DRAM2Q6UX65 266 aa12.87□□□□□ -0.35
SEC13-210ENST00000428626 SPATC1Q76KD6 591 aa12.87□□□□□ -0.35
SEC13-210ENST00000428626 PIGWQ7Z7B1 504 aa12.87□□□□□ -0.35
SEC13-210ENST00000428626 CPLX4Q7Z7G2 160 aa12.87□□□□□ -0.35
SEC13-210ENST00000428626 C11orf53Q8IXP5 236 aa12.87□□□□□ -0.35
SEC13-210ENST00000428626 GCSAMQ8N6F7 178 aa12.87□□□□□ -0.35
SEC13-210ENST00000428626 AQP11Q8NBQ7 271 aa12.87□□□□□ -0.35
SEC13-210ENST00000428626 OR52L1Q8NGH7 329 aa12.87□□□□□ -0.35
SEC13-210ENST00000428626 SLAMF6Q96DU3 332 aa12.87□□□□□ -0.35
SEC13-210ENST00000428626 COPS4Q9BT78 406 aa12.87□□□□□ -0.35
SEC13-210ENST00000428626 TSSK6Q9BXA6 273 aa12.87□□□□□ -0.35
SEC13-210ENST00000428626 MMADHCQ9H3L0 296 aaPredicted RBP12.87□□□□□ -0.35
SEC13-210ENST00000428626 FN3KRPQ9HA64 309 aa12.87□□□□□ -0.35
SEC13-210ENST00000428626 ARMC1Q9NVT9 282 aa12.87□□□□□ -0.35
SEC13-210ENST00000428626 C1orf123Q9NWV4 160 aa12.87□□□□□ -0.35
SEC13-210ENST00000428626 N6AMT1Q9Y5N5 214 aa12.87□□□□□ -0.35
SEC13-210ENST00000428626 A0A1B0GW55 424 aa12.86□□□□□ -0.35
SEC13-210ENST00000428626 ZNF593O00488 134 aaPredicted RBP12.86□□□□□ -0.35
SEC13-210ENST00000428626 ENSAO43768 121 aaKnown RBP12.86□□□□□ -0.35
SEC13-210ENST00000428626 GMDSO60547 372 aa12.86□□□□□ -0.35
SEC13-210ENST00000428626 DUX4L2P0CJ85 424 aa12.86□□□□□ -0.35
SEC13-210ENST00000428626 DUX4L3P0CJ86 424 aa12.86□□□□□ -0.35
SEC13-210ENST00000428626 DUX4L4P0CJ87 422 aa12.86□□□□□ -0.35
SEC13-210ENST00000428626 DUX4L5P0CJ88 424 aa12.86□□□□□ -0.35
SEC13-210ENST00000428626 DUX4L6P0CJ89 424 aa12.86□□□□□ -0.35
SEC13-210ENST00000428626 DUX4L7P0CJ90 424 aa12.86□□□□□ -0.35
SEC13-210ENST00000428626 SPI1P17947 270 aa12.86□□□□□ -0.35
SEC13-210ENST00000428626 CFHR2P36980 270 aa12.86□□□□□ -0.35
SEC13-210ENST00000428626 ENTPD1P49961 510 aa12.86□□□□□ -0.35
SEC13-210ENST00000428626 IL13RA1P78552 427 aa12.86□□□□□ -0.35
SEC13-210ENST00000428626 RELBQ01201 579 aa12.86□□□□□ -0.35
SEC13-210ENST00000428626 SRSF4Q08170 494 aaKnown RBP12.86□□□□□ -0.35
SEC13-210ENST00000428626 RPL13AP3Q6NVV1 102 aa12.86□□□□□ -0.35
SEC13-210ENST00000428626 DUX4L9Q6RFH8 374 aaPredicted RBP12.86□□□□□ -0.35
SEC13-210ENST00000428626 FAM90A1Q86YD7 464 aa12.86□□□□□ -0.35
SEC13-210ENST00000428626 SPSB4Q96A44 273 aa12.86□□□□□ -0.35
SEC13-210ENST00000428626 TMIGD2Q96BF3 282 aa12.86□□□□□ -0.35
SEC13-210ENST00000428626 TECTBQ96PL2 329 aa12.86□□□□□ -0.35
SEC13-210ENST00000428626 AMELYQ99218 206 aa12.86□□□□□ -0.35
SEC13-210ENST00000428626 KCNJ15Q99712 375 aa12.86□□□□□ -0.35
SEC13-210ENST00000428626 PCGF1Q9BSM1 259 aa12.86□□□□□ -0.35
SEC13-210ENST00000428626 SLC22A4Q9H015 551 aa12.86□□□□□ -0.35
SEC13-210ENST00000428626 MARCH7Q9H992 704 aa12.86□□□□□ -0.35
SEC13-210ENST00000428626 TNFRSF19Q9NS68 423 aa12.86□□□□□ -0.35
SEC13-210ENST00000428626 CENPMQ9NSP4 180 aa12.86□□□□□ -0.35
SEC13-210ENST00000428626 TBC1D23Q9NUY8 699 aa12.86□□□□□ -0.35
SEC13-210ENST00000428626 MRPL15Q9P015 296 aaKnown RBP12.86□□□□□ -0.35
SEC13-210ENST00000428626 ACTR3BQ9P1U1 418 aa12.86□□□□□ -0.35
SEC13-210ENST00000428626 ZNF319Q9P2F9 582 aa12.86□□□□□ -0.35
SEC13-210ENST00000428626 DUX4Q9UBX2 424 aa12.86□□□□□ -0.35
SEC13-210ENST00000428626 IGHV3OR15-7A0A075B7D8 119 aa12.85□□□□□ -0.35
SEC13-210ENST00000428626 CENPVL3A0A0U1RRI6 287 aa12.85□□□□□ -0.35
SEC13-210ENST00000428626 DHRS12A0PJE2 317 aa12.85□□□□□ -0.35
SEC13-210ENST00000428626 ADAM20O43506 726 aa12.85□□□□□ -0.35
SEC13-210ENST00000428626 CCNB2O95067 398 aa12.85□□□□□ -0.35
SEC13-210ENST00000428626 LHBP01229 141 aa12.85□□□□□ -0.35
SEC13-210ENST00000428626 GYPAP02724 150 aa12.85□□□□□ -0.35
SEC13-210ENST00000428626 GRPP07492 148 aa12.85□□□□□ -0.35
SEC13-210ENST00000428626 SLC25A1P53007 311 aa12.85□□□□□ -0.35
SEC13-210ENST00000428626 MS4A2Q01362 244 aa12.85□□□□□ -0.35
SEC13-210ENST00000428626 OR8B8Q15620 311 aa12.85□□□□□ -0.35
SEC13-210ENST00000428626 KLHL12Q53G59 568 aa12.85□□□□□ -0.35
SEC13-210ENST00000428626 TEX30Q5JUR7 227 aa12.85□□□□□ -0.35
SEC13-210ENST00000428626 C16orf89Q6UX73 402 aa12.85□□□□□ -0.35
SEC13-210ENST00000428626 PRSS45Q7RTY3 260 aa12.85□□□□□ -0.35
SEC13-210ENST00000428626 PLPP7Q8NBV4 271 aa12.85□□□□□ -0.35
SEC13-210ENST00000428626 SEH1LQ96EE3 360 aa12.85□□□□□ -0.35
SEC13-210ENST00000428626 MED20Q9H944 212 aa12.85□□□□□ -0.35
SEC13-210ENST00000428626 ARL2BPQ9Y2Y0 163 aa12.85□□□□□ -0.35
SEC13-210ENST00000428626 U3KQV3 271 aa12.85□□□□□ -0.35
SEC13-210ENST00000428626 VWFP04275 2813 aa12.85□□□□□ -0.35
SEC13-210ENST00000428626 FAM181BA6NEQ2 426 aa12.84□□□□□ -0.35
SEC13-210ENST00000428626 OOEPA6NGQ2 149 aa12.84□□□□□ -0.35
SEC13-210ENST00000428626 SRRM5B3KS81 715 aa12.84□□□□□ -0.35
SEC13-210ENST00000428626 ZNF879B4DU55 563 aa12.84□□□□□ -0.35
SEC13-210ENST00000428626 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.84□□□□□ -0.35
SEC13-210ENST00000428626 FMO3P31513 532 aa12.84□□□□□ -0.35
SEC13-210ENST00000428626 NPY4RP50391 375 aa12.84□□□□□ -0.35
SEC13-210ENST00000428626 FAM3AP98173 230 aa12.84□□□□□ -0.35
SEC13-210ENST00000428626 SPATS1Q496A3 300 aa12.84□□□□□ -0.35
SEC13-210ENST00000428626 GPR157Q5UAW9 335 aa12.84□□□□□ -0.35
SEC13-210ENST00000428626 Q6YL49 198 aa12.84□□□□□ -0.35
SEC13-210ENST00000428626 SLC16A9Q7RTY1 509 aa12.84□□□□□ -0.35
SEC13-210ENST00000428626 SGK3Q96BR1 496 aa12.84□□□□□ -0.35
SEC13-210ENST00000428626 WDFY2Q96P53 400 aa12.84□□□□□ -0.35
SEC13-210ENST00000428626 NIPSNAP1Q9BPW8 284 aa12.84□□□□□ -0.35
SEC13-210ENST00000428626 DGCR6LQ9BY27 220 aa12.84□□□□□ -0.35
SEC13-210ENST00000428626 CHIAQ9BZP6 476 aa12.84□□□□□ -0.35
SEC13-210ENST00000428626 SIRPDQ9H106 197 aa12.84□□□□□ -0.35
SEC13-210ENST00000428626 ERVK-18Q9QC07 812 aa12.84□□□□□ -0.35
SEC13-210ENST00000428626 FAM183AA6NL82 134 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms