RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 PTX4Q96A99 478 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 VN1R1Q9GZP7 353 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 MRPS28Q9Y2Q9 187 aaKnown RBP6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 RAB19A4D1S5 217 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 FTCDNL1E5RQL4 147 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 CRTAPO75718 401 aaPredicted RBP6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 BPNT1O95861 308 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 HOXB5P09067 269 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 HLA-GP17693 338 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 OR3A2P47893 321 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 MMP16P51512 607 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 CLDN6P56747 220 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 S100A10P60903 97 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 ZSCAN4Q8NAM6 433 aaPredicted RBP6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 RNF141Q8WVD5 230 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 OIT3Q8WWZ8 545 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 KCNK17Q96T54 332 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 SLC7A5P2Q9GIP4 190 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 FAM206AQ9NX38 181 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 SFTPBP07988 381 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 CD37P11049 281 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 FOLR1P15328 257 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 OR3A4PP47883 348 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 TDGQ13569 410 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 UQCC3Q6UW78 93 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 LYPD6Q86Y78 171 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 DTWD2Q8NBA8 298 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 MRPL38Q96DV4 380 aaKnown RBP6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 ACKR4Q9NPB9 350 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 OR5AC2Q9NZP5 309 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 CTSFQ9UBX1 484 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 CYB5R1Q9UHQ9 305 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 ZNF175Q9Y473 711 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 NDUFA2O43678 99 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 KNG1P01042 644 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 AMY2BP19961 511 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 CYCSP99999 105 aaKnown RBP6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 MFAP5Q13361 173 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 TMEM128Q5BJH2 165 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 PLAC9Q5JTB6 97 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 DEGS2Q6QHC5 323 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 CLEC18BQ6UXF7 455 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 TMPRSS9Q7Z410 1059 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 HOGA1Q86XE5 327 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 ZFP82Q8N141 532 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 OR2AJ1Q8NGZ0 328 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 C2CD4CQ8TF44 421 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 LPAR5Q9H1C0 372 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 C5orf66Q9H5L9 145 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 ELL3Q9HB65 397 aaPredicted RBP6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 RHBDD3Q9Y3P4 386 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 PCDH15Q96QU1 1955 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 A0A0A6YYD4 124 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 TEX13DA0A0J9YY54 714 aaPredicted RBP6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 LILRA5A6NI73 299 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 GLRA1P23415 457 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 NFYBP25208 207 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 NPBWR1P48145 328 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 DHPSP49366 369 aaPredicted RBP6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 HSD11B2P80365 405 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 QRFPP83859 136 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 FOXF1Q12946 379 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 OR5H2Q8NGV7 314 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 ARHGAP5-AS1Q96IT6 56 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 ZC3H10Q96K80 434 aaKnown RBP6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 CHST11Q9NPF2 352 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 GPR84Q9NQS5 396 aa6.68□□□□□ -1.34
SMARCC1-202ENST00000425518 TO15178 435 aa6.67□□□□□ -1.34
SMARCC1-202ENST00000425518 IGHMP01871 453 aa6.67□□□□□ -1.34
SMARCC1-202ENST00000425518 SERPINA5P05154 406 aa6.67□□□□□ -1.34
SMARCC1-202ENST00000425518 CLRN1P58418 232 aa6.67□□□□□ -1.34
SMARCC1-202ENST00000425518 TAS2R31P59538 309 aa6.67□□□□□ -1.34
SMARCC1-202ENST00000425518 RNF4P78317 190 aa6.67□□□□□ -1.34
SMARCC1-202ENST00000425518 FOXK1P85037 733 aa6.67□□□□□ -1.34
SMARCC1-202ENST00000425518 FAHD2BQ6P2I3 314 aaPredicted RBP6.67□□□□□ -1.34
SMARCC1-202ENST00000425518 OR10S1Q8NGN2 331 aa6.67□□□□□ -1.34
SMARCC1-202ENST00000425518 OR51F2Q8NH61 342 aa6.67□□□□□ -1.34
SMARCC1-202ENST00000425518 FAHD2AQ96GK7 314 aa6.67□□□□□ -1.34
SMARCC1-202ENST00000425518 UQCC2Q9BRT2 126 aa6.67□□□□□ -1.34
SMARCC1-202ENST00000425518 TMEM59Q9BXS4 323 aa6.67□□□□□ -1.34
SMARCC1-202ENST00000425518 C8orf33Q9H7E9 229 aaPredicted RBP6.67□□□□□ -1.34
SMARCC1-202ENST00000425518 ASH2LQ9UBL3 628 aa6.67□□□□□ -1.34
SMARCC1-202ENST00000425518 NDRG3Q9UGV2 375 aa6.67□□□□□ -1.34
SMARCC1-202ENST00000425518 A0A1W2PNR3 127 aa6.67□□□□□ -1.34
SMARCC1-202ENST00000425518 VSTM2BA6NLU5 285 aa6.67□□□□□ -1.34
SMARCC1-202ENST00000425518 RER1O15258 196 aa6.67□□□□□ -1.34
SMARCC1-202ENST00000425518 FGF16O43320 207 aa6.67□□□□□ -1.34
SMARCC1-202ENST00000425518 FBXO24O75426 580 aa6.67□□□□□ -1.34
SMARCC1-202ENST00000425518 RAD51DO75771 328 aa6.67□□□□□ -1.34
SMARCC1-202ENST00000425518 CHRM2P08172 466 aa6.67□□□□□ -1.34
SMARCC1-202ENST00000425518 NME2P22392 152 aa6.67□□□□□ -1.34
SMARCC1-202ENST00000425518 CD38P28907 300 aa6.67□□□□□ -1.34
SMARCC1-202ENST00000425518 CX3CR1P49238 355 aa6.67□□□□□ -1.34
SMARCC1-202ENST00000425518 TMEM50BP56557 158 aa6.67□□□□□ -1.34
SMARCC1-202ENST00000425518 CSNK2A1P68400 391 aaPredicted RBP6.67□□□□□ -1.34
SMARCC1-202ENST00000425518 RAB32Q13637 225 aa6.67□□□□□ -1.34
SMARCC1-202ENST00000425518 FAM57BQ71RH2 274 aa6.67□□□□□ -1.34
SMARCC1-202ENST00000425518 ZNF283Q8N7M2 679 aa6.67□□□□□ -1.34
SMARCC1-202ENST00000425518 CSNK2A3Q8NEV1 391 aa6.67□□□□□ -1.34
SMARCC1-202ENST00000425518 OR51T1Q8NGJ9 327 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms