RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 APOL4Q9BPW4 351 aa15.82■□□□□ 0.12
PTCD3-204ENST00000418628 PIMREGQ9BSJ6 248 aa15.82■□□□□ 0.12
PTCD3-204ENST00000418628 RGCCQ9H4X1 137 aa15.82■□□□□ 0.12
PTCD3-204ENST00000418628 CHODLQ9H9P2 273 aa15.82■□□□□ 0.12
PTCD3-204ENST00000418628 SAP30LQ9HAJ7 183 aa15.82■□□□□ 0.12
PTCD3-204ENST00000418628 NUFIP1Q9UHK0 495 aaKnown RBP15.82■□□□□ 0.12
PTCD3-204ENST00000418628 WNK2Q9Y3S1 2297 aa15.82■□□□□ 0.12
PTCD3-204ENST00000418628 SNTNA6NMZ2 147 aa15.81■□□□□ 0.12
PTCD3-204ENST00000418628 RNF223E7ERA6 249 aa15.81■□□□□ 0.12
PTCD3-204ENST00000418628 LYNX1G3V0Z9 82 aa15.81■□□□□ 0.12
PTCD3-204ENST00000418628 H0YJX3 145 aa15.81■□□□□ 0.12
PTCD3-204ENST00000418628 PNPP00491 289 aa15.81■□□□□ 0.12
PTCD3-204ENST00000418628 INHBBP09529 407 aa15.81■□□□□ 0.12
PTCD3-204ENST00000418628 LYNX1P0DP58 116 aa15.81■□□□□ 0.12
PTCD3-204ENST00000418628 CAPGP40121 348 aa15.81■□□□□ 0.12
PTCD3-204ENST00000418628 NR4A2P43354 598 aa15.81■□□□□ 0.12
PTCD3-204ENST00000418628 LOXL1Q08397 574 aaPredicted RBP15.81■□□□□ 0.12
PTCD3-204ENST00000418628 MFGE8Q08431 387 aaPredicted RBP15.81■□□□□ 0.12
PTCD3-204ENST00000418628 TSTQ16762 297 aaKnown RBP15.81■□□□□ 0.12
PTCD3-204ENST00000418628 OR56B2PQ8NGI1 322 aa15.81■□□□□ 0.12
PTCD3-204ENST00000418628 FBLIM1Q8WUP2 373 aa15.81■□□□□ 0.12
PTCD3-204ENST00000418628 RNF166Q96A37 237 aaPredicted RBP15.81■□□□□ 0.12
PTCD3-204ENST00000418628 ELMOD3Q96FG2 381 aa15.81■□□□□ 0.12
PTCD3-204ENST00000418628 REEP6Q96HR9 211 aa15.81■□□□□ 0.12
PTCD3-204ENST00000418628 LYZL4Q96KX0 146 aa15.81■□□□□ 0.12
PTCD3-204ENST00000418628 Q96MT0 163 aa15.81■□□□□ 0.12
PTCD3-204ENST00000418628 BPESC1Q9GZL8 116 aa15.81■□□□□ 0.12
PTCD3-204ENST00000418628 OR10A2Q9H208 303 aa15.81■□□□□ 0.12
PTCD3-204ENST00000418628 G6PC2Q9NQR9 355 aa15.81■□□□□ 0.12
PTCD3-204ENST00000418628 MRPL15Q9P015 296 aaKnown RBP15.81■□□□□ 0.12
PTCD3-204ENST00000418628 ZNF391Q9UJN7 358 aa15.81■□□□□ 0.12
PTCD3-204ENST00000418628 FN1P02751 2386 aaKnown RBP15.8■□□□□ 0.12
PTCD3-204ENST00000418628 A0A0U1RQV5 110 aa15.8■□□□□ 0.12
PTCD3-204ENST00000418628 MAGEB4O15481 346 aaPredicted RBP15.8■□□□□ 0.12
PTCD3-204ENST00000418628 TBX1O43435 398 aa15.8■□□□□ 0.12
PTCD3-204ENST00000418628 SULT1C4O75897 302 aa15.8■□□□□ 0.12
PTCD3-204ENST00000418628 IGHA1P01876 353 aa15.8■□□□□ 0.12
PTCD3-204ENST00000418628 TACSTD2P09758 323 aa15.8■□□□□ 0.12
PTCD3-204ENST00000418628 CFL1P23528 166 aaKnown RBP15.8■□□□□ 0.12
PTCD3-204ENST00000418628 ACTC1P68032 377 aa15.8■□□□□ 0.12
PTCD3-204ENST00000418628 ACTA1P68133 377 aa15.8■□□□□ 0.12
PTCD3-204ENST00000418628 TIGD6Q17RP2 521 aa15.8■□□□□ 0.12
PTCD3-204ENST00000418628 ZNF829Q3KNS6 432 aaPredicted RBP15.8■□□□□ 0.12
PTCD3-204ENST00000418628 KRT74Q7RTS7 529 aa15.8■□□□□ 0.12
PTCD3-204ENST00000418628 BHLHE23Q8NDY6 225 aa15.8■□□□□ 0.12
PTCD3-204ENST00000418628 OR10H4Q8NGA5 316 aa15.8■□□□□ 0.12
PTCD3-204ENST00000418628 OR13G1Q8NGZ3 307 aa15.8■□□□□ 0.12
PTCD3-204ENST00000418628 CYGBQ8WWM9 190 aa15.8■□□□□ 0.12
PTCD3-204ENST00000418628 PGAM5Q96HS1 289 aa15.8■□□□□ 0.12
PTCD3-204ENST00000418628 TBX5Q99593 518 aa15.8■□□□□ 0.12
PTCD3-204ENST00000418628 ZNF649Q9BS31 505 aa15.8■□□□□ 0.12
PTCD3-204ENST00000418628 MOB1AQ9H8S9 216 aa15.8■□□□□ 0.12
PTCD3-204ENST00000418628 ZNF275Q9NSD4 429 aaPredicted RBP15.8■□□□□ 0.12
PTCD3-204ENST00000418628 IL19Q9UHD0 177 aa15.8■□□□□ 0.12
PTCD3-204ENST00000418628 IKZF2Q9UKS7 526 aa15.8■□□□□ 0.12
PTCD3-204ENST00000418628 HSPE1-MOB4S4R3N1 261 aa15.8■□□□□ 0.12
PTCD3-204ENST00000418628 IGHV1-69-2A0A0G2JMI3 117 aa15.79■□□□□ 0.12
PTCD3-204ENST00000418628 TMEM269A0A1B0GVZ9 245 aa15.79■□□□□ 0.12
PTCD3-204ENST00000418628 H0YL77 283 aa15.79■□□□□ 0.12
PTCD3-204ENST00000418628 PTBP3O95758 552 aaKnown RBP15.79■□□□□ 0.12
PTCD3-204ENST00000418628 GNAO1P09471 354 aa15.79■□□□□ 0.12
PTCD3-204ENST00000418628 DDOSTP39656 456 aa15.79■□□□□ 0.12
PTCD3-204ENST00000418628 TNFAIP6P98066 277 aaPredicted RBP15.79■□□□□ 0.12
PTCD3-204ENST00000418628 CDONQ4KMG0 1287 aa15.79■□□□□ 0.12
PTCD3-204ENST00000418628 Q6ZSR3 168 aa15.79■□□□□ 0.12
PTCD3-204ENST00000418628 SETD9Q8NE22 299 aa15.79■□□□□ 0.12
PTCD3-204ENST00000418628 OR2Z1Q8NG97 314 aa15.79■□□□□ 0.12
PTCD3-204ENST00000418628 OR10AD1Q8NGE0 317 aa15.79■□□□□ 0.12
PTCD3-204ENST00000418628 TFAP2CQ92754 450 aa15.79■□□□□ 0.12
PTCD3-204ENST00000418628 ITFG2Q969R8 447 aa15.79■□□□□ 0.12
PTCD3-204ENST00000418628 JAM3Q9BX67 310 aa15.79■□□□□ 0.12
PTCD3-204ENST00000418628 VCXQ9H320 206 aa15.79■□□□□ 0.12
PTCD3-204ENST00000418628 BRD7Q9NPI1 651 aa15.79■□□□□ 0.12
PTCD3-204ENST00000418628 DECR2Q9NUI1 292 aa15.79■□□□□ 0.12
PTCD3-204ENST00000418628 CACNG2Q9Y698 323 aa15.79■□□□□ 0.12
PTCD3-204ENST00000418628 R4GMQ9 66 aa15.79■□□□□ 0.12
PTCD3-204ENST00000418628 ARHGAP32A7KAX9 2087 aa15.79■□□□□ 0.12
PTCD3-204ENST00000418628 HIVEP2P31629 2446 aa15.78■□□□□ 0.12
PTCD3-204ENST00000418628 TTRP02766 147 aa15.78■□□□□ 0.12
PTCD3-204ENST00000418628 ACKR3P25106 362 aa15.78■□□□□ 0.12
PTCD3-204ENST00000418628 CD200P41217 278 aa15.78■□□□□ 0.12
PTCD3-204ENST00000418628 GATA4P43694 442 aa15.78■□□□□ 0.12
PTCD3-204ENST00000418628 GSK3AP49840 483 aa15.78■□□□□ 0.12
PTCD3-204ENST00000418628 IL5RAQ01344 420 aa15.78■□□□□ 0.12
PTCD3-204ENST00000418628 RAB40BQ12829 278 aa15.78■□□□□ 0.12
PTCD3-204ENST00000418628 SMN1Q16637 294 aaKnown RBP15.78■□□□□ 0.12
PTCD3-204ENST00000418628 LAIR2Q6ISS4 152 aa15.78■□□□□ 0.12
PTCD3-204ENST00000418628 PLEKHG7Q6ZR37 379 aa15.78■□□□□ 0.12
PTCD3-204ENST00000418628 BIVMQ86UB2 503 aa15.78■□□□□ 0.12
PTCD3-204ENST00000418628 CELF2-AS1Q8N7Q2 184 aa15.78■□□□□ 0.12
PTCD3-204ENST00000418628 ZNF540Q8NDQ6 660 aa15.78■□□□□ 0.12
PTCD3-204ENST00000418628 CNIH3Q8TBE1 160 aa15.78■□□□□ 0.12
PTCD3-204ENST00000418628 ITLN1Q8WWA0 313 aa15.78■□□□□ 0.12
PTCD3-204ENST00000418628 OR2V2Q96R30 315 aa15.78■□□□□ 0.12
PTCD3-204ENST00000418628 SOX7Q9BT81 388 aa15.78■□□□□ 0.12
PTCD3-204ENST00000418628 EGLN1Q9GZT9 426 aa15.78■□□□□ 0.12
PTCD3-204ENST00000418628 PBOV1Q9GZY1 135 aa15.78■□□□□ 0.12
PTCD3-204ENST00000418628 SLC22A4Q9H015 551 aa15.78■□□□□ 0.12
PTCD3-204ENST00000418628 TMEM100Q9NV29 134 aa15.78■□□□□ 0.12
PTCD3-204ENST00000418628 PCDHGB1Q9Y5G3 927 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms