RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 OR51G2Q8NGK0 314 aa13.8□□□□□ -0.2
NOD1-202ENST00000411552 MSI2Q96DH6 328 aaKnown RBP13.8□□□□□ -0.2
NOD1-202ENST00000411552 REEP6Q96HR9 211 aa13.8□□□□□ -0.2
NOD1-202ENST00000411552 PGAM5Q96HS1 289 aa13.8□□□□□ -0.2
NOD1-202ENST00000411552 MEGF10Q96KG7 1140 aa13.8□□□□□ -0.2
NOD1-202ENST00000411552 OR10A2Q9H208 303 aa13.8□□□□□ -0.2
NOD1-202ENST00000411552 PPP1R3CQ9UQK1 317 aa13.8□□□□□ -0.2
NOD1-202ENST00000411552 WIPI2Q9Y4P8 454 aa13.8□□□□□ -0.2
NOD1-202ENST00000411552 IGHV3-64DA0A0J9YX35 117 aa13.79□□□□□ -0.2
NOD1-202ENST00000411552 SBK2P0C263 348 aa13.79□□□□□ -0.2
NOD1-202ENST00000411552 HOXB4P17483 251 aaPredicted RBP13.79□□□□□ -0.2
NOD1-202ENST00000411552 CA6P23280 308 aa13.79□□□□□ -0.2
NOD1-202ENST00000411552 SRP9P49458 86 aaKnown RBP13.79□□□□□ -0.2
NOD1-202ENST00000411552 CXCR4P61073 352 aa13.79□□□□□ -0.2
NOD1-202ENST00000411552 FAM3AP98173 230 aa13.79□□□□□ -0.2
NOD1-202ENST00000411552 SLC3A1Q07837 685 aa13.79□□□□□ -0.2
NOD1-202ENST00000411552 GFOD2Q3B7J2 385 aa13.79□□□□□ -0.2
NOD1-202ENST00000411552 DEGS2Q6QHC5 323 aa13.79□□□□□ -0.2
NOD1-202ENST00000411552 ZNF679Q8IYX0 411 aa13.79□□□□□ -0.2
NOD1-202ENST00000411552 TRUB1Q8WWH5 349 aaKnown RBP13.79□□□□□ -0.2
NOD1-202ENST00000411552 RAB1CQ92928 201 aa13.79□□□□□ -0.2
NOD1-202ENST00000411552 TIMD4Q96H15 378 aa13.79□□□□□ -0.2
NOD1-202ENST00000411552 OR8B4Q96RC9 309 aa13.79□□□□□ -0.2
NOD1-202ENST00000411552 MNTQ99583 582 aa13.79□□□□□ -0.2
NOD1-202ENST00000411552 MROQ9BYG7 248 aa13.79□□□□□ -0.2
NOD1-202ENST00000411552 GCM1Q9NP62 436 aa13.79□□□□□ -0.2
NOD1-202ENST00000411552 TMEM106BQ9NUM4 274 aa13.79□□□□□ -0.2
NOD1-202ENST00000411552 CLN6Q9NWW5 311 aa13.79□□□□□ -0.2
NOD1-202ENST00000411552 MRPL15Q9P015 296 aaKnown RBP13.79□□□□□ -0.2
NOD1-202ENST00000411552 LOC100289279A0A1B0GTE1 492 aa13.78□□□□□ -0.2
NOD1-202ENST00000411552 hCG_38984A0A1B0GV85 526 aa13.78□□□□□ -0.2
NOD1-202ENST00000411552 A8MV72 311 aaPredicted RBP13.78□□□□□ -0.2
NOD1-202ENST00000411552 ZNF254O75437 659 aa13.78□□□□□ -0.2
NOD1-202ENST00000411552 APOL3O95236 402 aa13.78□□□□□ -0.2
NOD1-202ENST00000411552 ANPEPP15144 967 aa13.78□□□□□ -0.2
NOD1-202ENST00000411552 SNRPGP62308 76 aaKnown RBP13.78□□□□□ -0.2
NOD1-202ENST00000411552 POU4F2Q12837 409 aa13.78□□□□□ -0.2
NOD1-202ENST00000411552 RCN1Q15293 331 aa13.78□□□□□ -0.2
NOD1-202ENST00000411552 OR8G1Q15617 311 aa13.78□□□□□ -0.2
NOD1-202ENST00000411552 ZNF322Q6U7Q0 402 aaPredicted RBP13.78□□□□□ -0.2
NOD1-202ENST00000411552 OR8B12Q8NGG6 310 aa13.78□□□□□ -0.2
NOD1-202ENST00000411552 RFKQ969G6 155 aa13.78□□□□□ -0.2
NOD1-202ENST00000411552 C1orf159Q96HA4 380 aa13.78□□□□□ -0.2
NOD1-202ENST00000411552 APOL4Q9BPW4 351 aa13.78□□□□□ -0.2
NOD1-202ENST00000411552 ADAT1Q9BUB4 502 aaKnown RBP13.78□□□□□ -0.2
NOD1-202ENST00000411552 SLC22A4Q9H015 551 aa13.78□□□□□ -0.2
NOD1-202ENST00000411552 RGCCQ9H4X1 137 aa13.78□□□□□ -0.2
NOD1-202ENST00000411552 FAM206AQ9NX38 181 aa13.78□□□□□ -0.2
NOD1-202ENST00000411552 IKZF2Q9UKS7 526 aa13.78□□□□□ -0.2
NOD1-202ENST00000411552 GMPPBQ9Y5P6 360 aa13.78□□□□□ -0.2
NOD1-202ENST00000411552 TMEM269A0A1B0GVZ9 245 aa13.77□□□□□ -0.21
NOD1-202ENST00000411552 ZNF670-ZNF695F2Z2N8 137 aa13.77□□□□□ -0.21
NOD1-202ENST00000411552 PHYHO14832 338 aa13.77□□□□□ -0.21
NOD1-202ENST00000411552 MAGEB4O15481 346 aaPredicted RBP13.77□□□□□ -0.21
NOD1-202ENST00000411552 GMDSO60547 372 aa13.77□□□□□ -0.21
NOD1-202ENST00000411552 ENTPD6O75354 484 aa13.77□□□□□ -0.21
NOD1-202ENST00000411552 CFL1P23528 166 aaKnown RBP13.77□□□□□ -0.21
NOD1-202ENST00000411552 DDOSTP39656 456 aa13.77□□□□□ -0.21
NOD1-202ENST00000411552 GSK3AP49840 483 aa13.77□□□□□ -0.21
NOD1-202ENST00000411552 MMP16P51512 607 aa13.77□□□□□ -0.21
NOD1-202ENST00000411552 RIDAP52758 137 aaKnown RBP13.77□□□□□ -0.21
NOD1-202ENST00000411552 LMO4P61968 165 aa13.77□□□□□ -0.21
NOD1-202ENST00000411552 MAB21L1Q13394 359 aa13.77□□□□□ -0.21
NOD1-202ENST00000411552 TMED1Q13445 227 aa13.77□□□□□ -0.21
NOD1-202ENST00000411552 SLC25A30Q5SVS4 291 aa13.77□□□□□ -0.21
NOD1-202ENST00000411552 SSX6Q7RTT6 188 aa13.77□□□□□ -0.21
NOD1-202ENST00000411552 PEG10Q86TG7 708 aaKnown RBP13.77□□□□□ -0.21
NOD1-202ENST00000411552 DVL3Q92997 716 aaPredicted RBP13.77□□□□□ -0.21
NOD1-202ENST00000411552 LYZL4Q96KX0 146 aa13.77□□□□□ -0.21
NOD1-202ENST00000411552 SIGLEC11Q96RL6 698 aa13.77□□□□□ -0.21
NOD1-202ENST00000411552 TBX5Q99593 518 aa13.77□□□□□ -0.21
NOD1-202ENST00000411552 FAM118AQ9NWS6 357 aa13.77□□□□□ -0.21
NOD1-202ENST00000411552 AASSQ9UDR5 926 aa13.77□□□□□ -0.21
NOD1-202ENST00000411552 NOP16Q9Y3C1 178 aaKnown RBP13.77□□□□□ -0.21
NOD1-202ENST00000411552 NPTNQ9Y639 398 aa13.77□□□□□ -0.21
NOD1-202ENST00000411552 JMJD1CQ15652 2540 aa13.77□□□□□ -0.21
NOD1-202ENST00000411552 ACOD1A6NK06 481 aa13.76□□□□□ -0.21
NOD1-202ENST00000411552 TGFAP01135 160 aa13.76□□□□□ -0.21
NOD1-202ENST00000411552 DCTDP32321 178 aa13.76□□□□□ -0.21
NOD1-202ENST00000411552 CD200P41217 278 aa13.76□□□□□ -0.21
NOD1-202ENST00000411552 GATA4P43694 442 aa13.76□□□□□ -0.21
NOD1-202ENST00000411552 CDH15P55291 814 aa13.76□□□□□ -0.21
NOD1-202ENST00000411552 EGR3Q06889 387 aa13.76□□□□□ -0.21
NOD1-202ENST00000411552 MFGE8Q08431 387 aaPredicted RBP13.76□□□□□ -0.21
NOD1-202ENST00000411552 OR8B8Q15620 311 aa13.76□□□□□ -0.21
NOD1-202ENST00000411552 OCLNQ16625 522 aa13.76□□□□□ -0.21
NOD1-202ENST00000411552 LRRC36Q1X8D7 754 aa13.76□□□□□ -0.21
NOD1-202ENST00000411552 ZNF829Q3KNS6 432 aaPredicted RBP13.76□□□□□ -0.21
NOD1-202ENST00000411552 FAM166AQ6J272 317 aa13.76□□□□□ -0.21
NOD1-202ENST00000411552 MOGAT3Q86VF5 341 aa13.76□□□□□ -0.21
NOD1-202ENST00000411552 GALNT4Q8N4A0 578 aa13.76□□□□□ -0.21
NOD1-202ENST00000411552 CELF2-AS1Q8N7Q2 184 aa13.76□□□□□ -0.21
NOD1-202ENST00000411552 LINC01356Q8N9X3 169 aa13.76□□□□□ -0.21
NOD1-202ENST00000411552 OR10H4Q8NGA5 316 aa13.76□□□□□ -0.21
NOD1-202ENST00000411552 ZNF420Q8TAQ5 688 aaPredicted RBP13.76□□□□□ -0.21
NOD1-202ENST00000411552 SMPD3Q9NY59 655 aaPredicted RBP13.76□□□□□ -0.21
NOD1-202ENST00000411552 MRM2Q9UI43 246 aaKnown RBP13.76□□□□□ -0.21
NOD1-202ENST00000411552 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.76□□□□□ -0.21
NOD1-202ENST00000411552 LOC100130705A0A1B0GUX0 176 aa13.75□□□□□ -0.21
NOD1-202ENST00000411552 A0A1W2PQL4 384 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms