RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 METTL7AQ9H8H3 244 aa3.51□□□□□ -1.85
CLK1-203ENST00000409769 COQ10BQ9H8M1 238 aa3.51□□□□□ -1.85
CLK1-203ENST00000409769 REEP1Q9H902 201 aa3.51□□□□□ -1.85
CLK1-203ENST00000409769 C12orf10Q9HB07 376 aa3.51□□□□□ -1.85
CLK1-203ENST00000409769 C8orf4Q9NR00 106 aa3.51□□□□□ -1.85
CLK1-203ENST00000409769 SDHAF3Q9NRP4 125 aa3.51□□□□□ -1.85
CLK1-203ENST00000409769 DEPPQ9NTK1 212 aa3.51□□□□□ -1.85
CLK1-203ENST00000409769 GPR83Q9NYM4 423 aa3.51□□□□□ -1.85
CLK1-203ENST00000409769 USE1Q9NZ43 259 aa3.51□□□□□ -1.85
CLK1-203ENST00000409769 STMN3Q9NZ72 180 aa3.51□□□□□ -1.85
CLK1-203ENST00000409769 KLRF1Q9NZS2 232 aa3.51□□□□□ -1.85
CLK1-203ENST00000409769 TEKT2Q9UIF3 430 aa3.51□□□□□ -1.85
CLK1-203ENST00000409769 SAMHD1Q9Y3Z3 626 aaKnown RBP3.51□□□□□ -1.85
CLK1-203ENST00000409769 FAM32AQ9Y421 112 aaKnown RBP3.51□□□□□ -1.85
CLK1-203ENST00000409769 U3KQV3 271 aa3.51□□□□□ -1.85
CLK1-203ENST00000409769 ZGRF1Q86YA3 2104 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 SPENQ96T58 3664 aaKnown RBP3.5□□□□□ -1.85
CLK1-203ENST00000409769 A0A087WUU8 490 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 A0A1W2PPR1 153 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 PDLIM1O00151 329 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 CCL24O00175 119 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 TNFRSF11BO00300 401 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 EI24O14681 340 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 RRP8O43159 456 aaKnown RBP3.5□□□□□ -1.85
CLK1-203ENST00000409769 IDH3BO43837 385 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 EFNA2O43921 213 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 CDC40O60508 579 aaKnown RBP eCLIP3.5□□□□□ -1.85
CLK1-203ENST00000409769 NPIPB7O75200 414 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 E2F6O75461 281 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 GLSO94925 669 aaPredicted RBP3.5□□□□□ -1.85
CLK1-203ENST00000409769 CCNB2O95067 398 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 GADD45GO95257 159 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 HPRP00739 348 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 F10P00742 488 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 P04436 131 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 PGCP20142 388 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 CNR1P21554 472 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 AADACP22760 399 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 EDNRAP25101 427 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 SRD5A2P31213 254 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 RBM34P42696 430 aaKnown RBP3.5□□□□□ -1.85
CLK1-203ENST00000409769 SLC1A3P43003 542 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 OMPP47874 163 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 GSSP48637 474 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 IDH2P48735 452 aaKnown RBP3.5□□□□□ -1.85
CLK1-203ENST00000409769 DNASE1L1P49184 302 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 TNFSF10P50591 281 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 DAPP51397 102 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 CCL11P51671 97 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 CCR4P51679 360 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 ARHGDIAP52565 204 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 UGT2B15P54855 530 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 AQP4P55087 323 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 CTBP2P56545 445 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 SMIM11AP58511 58 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 COPZ1P61923 177 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 PRKCDQ05655 676 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 MZT1Q08AG7 82 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 CAMK2DQ13557 499 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 RAPSNQ13702 412 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 TRAM2Q15035 370 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 QPRTQ15274 297 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 LRRC36Q1X8D7 754 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 PLPPR5Q32ZL2 321 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 SNAI3Q3KNW1 292 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 NHSL2Q5HYW2 709 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 TIGD3Q6B0B8 471 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 OR5M10Q6IEU7 315 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 SLC25A25Q6KCM7 469 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 C1orf94Q6P1W5 598 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 ARSKQ6UWY0 536 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 LINC00696Q6ZRV3 163 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 MBOAT2Q6ZWT7 520 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 GRINAQ7Z429 371 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 GPR141Q7Z602 305 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 NRARPQ7Z6K4 114 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 ZER1Q7Z7L7 766 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 PLCZ1Q86YW0 608 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 HIPK1Q86Z02 1210 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 NRMQ8IXM6 262 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 TIGD4Q8IY51 512 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 PARP8Q8N3A8 854 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 CADM2Q8N3J6 435 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 GTPBP8Q8N3Z3 284 aaPredicted RBP3.5□□□□□ -1.85
CLK1-203ENST00000409769 CBR4Q8N4T8 237 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 ZFP62Q8NB50 900 aaPredicted RBP3.5□□□□□ -1.85
CLK1-203ENST00000409769 AQP11Q8NBQ7 271 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 CATSPER1Q8NEC5 780 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 OR2M7Q8NG81 312 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 OR10G2Q8NGC3 310 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 OR4K5Q8NGD3 323 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 OR9Q2Q8NGE9 314 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 OR52J3Q8NH60 311 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 OCC1Q8TAD7 63 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 GIPC3Q8TF64 312 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 TMEM239Q8WW34 195 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 LIPHQ8WWY8 451 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 ACOT11Q8WXI4 607 aaPredicted RBP3.5□□□□□ -1.85
CLK1-203ENST00000409769 ST8SIA1Q92185 356 aa3.5□□□□□ -1.85
CLK1-203ENST00000409769 SH3YL1Q96HL8 342 aaPredicted RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms