RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 CX3CR1P49238 355 aa14.41□□□□□ -0.1
PCDH1-203ENST00000394536 RGS19P49795 217 aa14.41□□□□□ -0.1
PCDH1-203ENST00000394536 RPS4XP62701 263 aaKnown RBP14.41□□□□□ -0.1
PCDH1-203ENST00000394536 RNF4P78317 190 aa14.41□□□□□ -0.1
PCDH1-203ENST00000394536 NR0B2Q15466 257 aa14.41□□□□□ -0.1
PCDH1-203ENST00000394536 OR1L3Q8NH93 324 aa14.41□□□□□ -0.1
PCDH1-203ENST00000394536 OR6C1Q96RD1 312 aa14.41□□□□□ -0.1
PCDH1-203ENST00000394536 ZCCHC4Q9H5U6 513 aa14.41□□□□□ -0.1
PCDH1-203ENST00000394536 TAF9BQ9HBM6 251 aa14.41□□□□□ -0.1
PCDH1-203ENST00000394536 SLCO1B1Q9Y6L6 691 aa14.41□□□□□ -0.1
PCDH1-203ENST00000394536 TXNL1O43396 289 aa14.4□□□□□ -0.1
PCDH1-203ENST00000394536 MTRF1O75570 445 aaKnown RBP14.4□□□□□ -0.1
PCDH1-203ENST00000394536 BGLAPP02818 100 aa14.4□□□□□ -0.1
PCDH1-203ENST00000394536 IGHV4-34P06331 123 aa14.4□□□□□ -0.1
PCDH1-203ENST00000394536 OR1N1Q8NGS0 311 aa14.4□□□□□ -0.1
PCDH1-203ENST00000394536 MR1Q95460 341 aa14.4□□□□□ -0.1
PCDH1-203ENST00000394536 GPX7Q96SL4 187 aaPredicted RBP14.4□□□□□ -0.1
PCDH1-203ENST00000394536 PCDHGA1Q9Y5H4 931 aa14.4□□□□□ -0.1
PCDH1-203ENST00000394536 UNC80Q8N2C7 3258 aa14.4□□□□□ -0.1
PCDH1-203ENST00000394536 TRBV5-7A0A0A0MS05 114 aa14.4□□□□□ -0.1
PCDH1-203ENST00000394536 MED19A0JLT2 244 aaPredicted RBP14.4□□□□□ -0.1
PCDH1-203ENST00000394536 NPIPB9F8W1W9 429 aa14.4□□□□□ -0.1
PCDH1-203ENST00000394536 TP53I11O14683 189 aa14.4□□□□□ -0.1
PCDH1-203ENST00000394536 SSX5O60225 188 aa14.4□□□□□ -0.1
PCDH1-203ENST00000394536 LRP3O75074 770 aa14.4□□□□□ -0.1
PCDH1-203ENST00000394536 LAP3P28838 519 aa14.4□□□□□ -0.1
PCDH1-203ENST00000394536 LINC00114Q6XXX2 140 aa14.4□□□□□ -0.1
PCDH1-203ENST00000394536 CATSPERDQ86XM0 798 aa14.4□□□□□ -0.1
PCDH1-203ENST00000394536 ROBO4Q8WZ75 1007 aa14.4□□□□□ -0.1
PCDH1-203ENST00000394536 MCHR2Q969V1 340 aa14.4□□□□□ -0.1
PCDH1-203ENST00000394536 SLAMF9Q96A28 289 aa14.4□□□□□ -0.1
PCDH1-203ENST00000394536 ADAT3Q96EY9 351 aaPredicted RBP14.4□□□□□ -0.1
PCDH1-203ENST00000394536 SLC17A5Q9NRA2 495 aa14.4□□□□□ -0.1
PCDH1-203ENST00000394536 ATPIF1Q9UII2 106 aa14.4□□□□□ -0.1
PCDH1-203ENST00000394536 SSBP1Q04837 148 aaKnown RBP14.4□□□□□ -0.1
PCDH1-203ENST00000394536 INPP5JQ15735 1006 aaPredicted RBP14.4□□□□□ -0.1
PCDH1-203ENST00000394536 RTN4RQ9BZR6 473 aa14.4□□□□□ -0.1
PCDH1-203ENST00000394536 NCOR1O75376 2440 aa14.39□□□□□ -0.11
PCDH1-203ENST00000394536 HSPB2A8KAH6 182 aa14.39□□□□□ -0.11
PCDH1-203ENST00000394536 OR3A4PP47883 348 aa14.39□□□□□ -0.11
PCDH1-203ENST00000394536 HSPB2Q16082 182 aa14.39□□□□□ -0.11
PCDH1-203ENST00000394536 TAF9Q16594 264 aa14.39□□□□□ -0.11
PCDH1-203ENST00000394536 SP6Q3SY56 376 aa14.39□□□□□ -0.11
PCDH1-203ENST00000394536 TMEM128Q5BJH2 165 aa14.39□□□□□ -0.11
PCDH1-203ENST00000394536 CLEC9AQ6UXN8 241 aa14.39□□□□□ -0.11
PCDH1-203ENST00000394536 C9orf40Q8IXQ3 194 aa14.39□□□□□ -0.11
PCDH1-203ENST00000394536 SLC22A8Q8TCC7 542 aa14.39□□□□□ -0.11
PCDH1-203ENST00000394536 C14orf79Q96F83 325 aa14.39□□□□□ -0.11
PCDH1-203ENST00000394536 PRMT8Q9NR22 394 aaPredicted RBP14.39□□□□□ -0.11
PCDH1-203ENST00000394536 IGHV3-15A0A0B4J1V0 119 aa14.39□□□□□ -0.11
PCDH1-203ENST00000394536 ABHD16AO95870 558 aa14.39□□□□□ -0.11
PCDH1-203ENST00000394536 GNRHRP30968 328 aa14.39□□□□□ -0.11
PCDH1-203ENST00000394536 SCAND1P57086 179 aa14.39□□□□□ -0.11
PCDH1-203ENST00000394536 GNMTQ14749 295 aa14.39□□□□□ -0.11
PCDH1-203ENST00000394536 OGFOD3Q6PK18 319 aa14.39□□□□□ -0.11
PCDH1-203ENST00000394536 C12orf57Q99622 126 aa14.39□□□□□ -0.11
PCDH1-203ENST00000394536 MFRPQ9BY79 579 aa14.39□□□□□ -0.11
PCDH1-203ENST00000394536 ANKRD10Q9NXR5 420 aa14.39□□□□□ -0.11
PCDH1-203ENST00000394536 RASL12Q9NYN1 266 aa14.39□□□□□ -0.11
PCDH1-203ENST00000394536 ZFAND5O76080 213 aa14.39□□□□□ -0.11
PCDH1-203ENST00000394536 DIRAS3O95661 229 aa14.39□□□□□ -0.11
PCDH1-203ENST00000394536 VSIG8P0DPA2 414 aa14.39□□□□□ -0.11
PCDH1-203ENST00000394536 PPIAP62937 165 aaKnown RBP14.39□□□□□ -0.11
PCDH1-203ENST00000394536 RAB32Q13637 225 aa14.39□□□□□ -0.11
PCDH1-203ENST00000394536 GUCA2BQ16661 112 aa14.39□□□□□ -0.11
PCDH1-203ENST00000394536 NKAIN1Q4KMZ8 207 aa14.39□□□□□ -0.11
PCDH1-203ENST00000394536 ZNF565Q8N9K5 539 aa14.39□□□□□ -0.11
PCDH1-203ENST00000394536 SUMF1Q8NBK3 374 aa14.39□□□□□ -0.11
PCDH1-203ENST00000394536 MRPS24Q96EL2 167 aaKnown RBP14.39□□□□□ -0.11
PCDH1-203ENST00000394536 CMSS1Q9BQ75 279 aaKnown RBP14.39□□□□□ -0.11
PCDH1-203ENST00000394536 PRRG4Q9BZD6 226 aa14.39□□□□□ -0.11
PCDH1-203ENST00000394536 MRPS17Q9Y2R5 130 aaKnown RBP14.39□□□□□ -0.11
PCDH1-203ENST00000394536 SCRG1O75711 98 aa14.38□□□□□ -0.11
PCDH1-203ENST00000394536 KLK3P07288 261 aaPredicted RBP14.38□□□□□ -0.11
PCDH1-203ENST00000394536 FAHP16930 419 aa14.38□□□□□ -0.11
PCDH1-203ENST00000394536 ZNF84P51523 738 aa14.38□□□□□ -0.11
PCDH1-203ENST00000394536 FLI1Q01543 452 aaPredicted RBP14.38□□□□□ -0.11
PCDH1-203ENST00000394536 BORCS8Q96FH0 119 aa14.38□□□□□ -0.11
PCDH1-203ENST00000394536 NXT1Q9UKK6 140 aaKnown RBP14.38□□□□□ -0.11
PCDH1-203ENST00000394536 KCNK7Q9Y2U2 307 aa14.38□□□□□ -0.11
PCDH1-203ENST00000394536 UBE2J1Q9Y385 318 aaPredicted RBP14.38□□□□□ -0.11
PCDH1-203ENST00000394536 LOC101059948A0A1B0GTJ6 334 aa14.38□□□□□ -0.11
PCDH1-203ENST00000394536 ANGPTL7O43827 346 aa14.38□□□□□ -0.11
PCDH1-203ENST00000394536 NME2P1O60361 137 aa14.38□□□□□ -0.11
PCDH1-203ENST00000394536 OR2J2O76002 312 aa14.38□□□□□ -0.11
PCDH1-203ENST00000394536 APOBEC1P41238 236 aaKnown RBP14.38□□□□□ -0.11
PCDH1-203ENST00000394536 MYBPHQ13203 477 aa14.38□□□□□ -0.11
PCDH1-203ENST00000394536 ADAM5Q6NVV9 412 aa14.38□□□□□ -0.11
PCDH1-203ENST00000394536 NUBPLQ8TB37 319 aa14.38□□□□□ -0.11
PCDH1-203ENST00000394536 GAS2L1Q99501 681 aaPredicted RBP14.38□□□□□ -0.11
PCDH1-203ENST00000394536 NPAS1Q99742 590 aa14.38□□□□□ -0.11
PCDH1-203ENST00000394536 ZNF2Q9BSG1 426 aaPredicted RBP14.38□□□□□ -0.11
PCDH1-203ENST00000394536 SLC5A7Q9GZV3 580 aa14.38□□□□□ -0.11
PCDH1-203ENST00000394536 KCNJ16Q9NPI9 418 aa14.38□□□□□ -0.11
PCDH1-203ENST00000394536 EXOSC3Q9NQT5 275 aaKnown RBP14.38□□□□□ -0.11
PCDH1-203ENST00000394536 C19orf25Q9UFG5 118 aaPredicted RBP14.38□□□□□ -0.11
PCDH1-203ENST00000394536 B3GALT5Q9Y2C3 310 aa14.38□□□□□ -0.11
PCDH1-203ENST00000394536 TMEM218A2RU14 115 aa14.38□□□□□ -0.11
PCDH1-203ENST00000394536 RAD51DO75771 328 aa14.38□□□□□ -0.11
PCDH1-203ENST00000394536 GUSBP08236 651 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms