RNA–Protein interactions for RNA: ENST00000394013.6

RNF41-202, Transcript of ring finger protein 41, humanhuman

TSL 1 (best) BASIC

Gene RNF41, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-202ENST00000394013 TRAPPC2BP0DI82 140 aa12.52□□□□□ -0.4
RNF41-202ENST00000394013 GTF2F2P13984 249 aa12.52□□□□□ -0.4
RNF41-202ENST00000394013 PSMB1P20618 241 aaKnown RBP12.52□□□□□ -0.4
RNF41-202ENST00000394013 ZNF84P51523 738 aa12.52□□□□□ -0.4
RNF41-202ENST00000394013 UBE2MP61081 183 aaKnown RBP12.52□□□□□ -0.4
RNF41-202ENST00000394013 QRFPP83859 136 aa12.52□□□□□ -0.4
RNF41-202ENST00000394013 SLC25A25Q6KCM7 469 aa12.52□□□□□ -0.4
RNF41-202ENST00000394013 SKA3Q8IX90 412 aa12.52□□□□□ -0.4
RNF41-202ENST00000394013 SLC7A5P1Q8MH63 180 aa12.52□□□□□ -0.4
RNF41-202ENST00000394013 GPR137CQ8N3F9 429 aa12.52□□□□□ -0.4
RNF41-202ENST00000394013 NAXEQ8NCW5 288 aa12.52□□□□□ -0.4
RNF41-202ENST00000394013 OR5D14Q8NGL3 314 aa12.52□□□□□ -0.4
RNF41-202ENST00000394013 NUDCD2Q8WVJ2 157 aa12.52□□□□□ -0.4
RNF41-202ENST00000394013 ZNF799Q96GE5 643 aa12.52□□□□□ -0.4
RNF41-202ENST00000394013 SF3B5Q9BWJ5 86 aaKnown RBP12.52□□□□□ -0.4
RNF41-202ENST00000394013 MED28Q9H204 178 aa12.52□□□□□ -0.4
RNF41-202ENST00000394013 ZNF222Q9UK12 451 aa12.52□□□□□ -0.4
RNF41-202ENST00000394013 KLK13Q9UKR3 277 aa12.52□□□□□ -0.4
RNF41-202ENST00000394013 MAP1BP46821 2468 aaKnown RBP12.52□□□□□ -0.41
RNF41-202ENST00000394013 PRR14LQ5THK1 2151 aa12.52□□□□□ -0.41
RNF41-202ENST00000394013 TTLL8A6PVC2 850 aa12.52□□□□□ -0.41
RNF41-202ENST00000394013 PYCARD-AS1I3L0S3 204 aa12.52□□□□□ -0.41
RNF41-202ENST00000394013 DHFRP00374 187 aa12.52□□□□□ -0.41
RNF41-202ENST00000394013 SP1P08047 785 aa12.52□□□□□ -0.41
RNF41-202ENST00000394013 HCKP08631 526 aa12.52□□□□□ -0.41
RNF41-202ENST00000394013 CCL2P13500 99 aa12.52□□□□□ -0.41
RNF41-202ENST00000394013 GNB3P16520 340 aa12.52□□□□□ -0.41
RNF41-202ENST00000394013 ACKR3P25106 362 aa12.52□□□□□ -0.41
RNF41-202ENST00000394013 PRSS3P35030 304 aa12.52□□□□□ -0.41
RNF41-202ENST00000394013 ZP1P60852 638 aa12.52□□□□□ -0.41
RNF41-202ENST00000394013 HIST1H3AP68431 136 aa12.52□□□□□ -0.41
RNF41-202ENST00000394013 UBE2V2Q15819 145 aa12.52□□□□□ -0.41
RNF41-202ENST00000394013 HIST2H3PS2Q5TEC6 136 aa12.52□□□□□ -0.41
RNF41-202ENST00000394013 FAM27BQ5VT28 67 aa12.52□□□□□ -0.41
RNF41-202ENST00000394013 JMJD6Q6NYC1 403 aaPredicted RBP12.52□□□□□ -0.41
RNF41-202ENST00000394013 HIST2H3AQ71DI3 136 aa12.52□□□□□ -0.41
RNF41-202ENST00000394013 MDS2Q8NDY4 140 aa12.52□□□□□ -0.41
RNF41-202ENST00000394013 PRSS33Q8NF86 280 aa12.52□□□□□ -0.41
RNF41-202ENST00000394013 OR51S1Q8NGJ8 323 aa12.52□□□□□ -0.41
RNF41-202ENST00000394013 THRSPQ92748 146 aa12.52□□□□□ -0.41
RNF41-202ENST00000394013 PIGTQ969N2 578 aa12.52□□□□□ -0.41
RNF41-202ENST00000394013 SORCS2Q96PQ0 1159 aa12.52□□□□□ -0.41
RNF41-202ENST00000394013 TINAGL1Q9GZM7 467 aaPredicted RBP12.52□□□□□ -0.41
RNF41-202ENST00000394013 NOX3Q9HBY0 568 aa12.52□□□□□ -0.41
RNF41-202ENST00000394013 GPR35Q9HC97 309 aa12.52□□□□□ -0.41
RNF41-202ENST00000394013 SLC7A10Q9NS82 523 aa12.52□□□□□ -0.41
RNF41-202ENST00000394013 ZNF503-AS2A6NEH8 195 aa12.51□□□□□ -0.41
RNF41-202ENST00000394013 RAB27BO00194 218 aa12.51□□□□□ -0.41
RNF41-202ENST00000394013 CYTIPO60759 359 aa12.51□□□□□ -0.41
RNF41-202ENST00000394013 HPNP05981 417 aa12.51□□□□□ -0.41
RNF41-202ENST00000394013 GABRA1P14867 456 aa12.51□□□□□ -0.41
RNF41-202ENST00000394013 MNDAP41218 407 aa12.51□□□□□ -0.41
RNF41-202ENST00000394013 GRB2P62993 217 aaKnown RBP12.51□□□□□ -0.41
RNF41-202ENST00000394013 MRPS34P82930 218 aaKnown RBP12.51□□□□□ -0.41
RNF41-202ENST00000394013 PSG4Q00888 419 aa12.51□□□□□ -0.41
RNF41-202ENST00000394013 GLIPR1L1Q6UWM5 242 aa12.51□□□□□ -0.41
RNF41-202ENST00000394013 ZNF101Q8IZC7 436 aa12.51□□□□□ -0.41
RNF41-202ENST00000394013 CHST4Q8NCG5 386 aa12.51□□□□□ -0.41
RNF41-202ENST00000394013 SGK3Q96BR1 496 aa12.51□□□□□ -0.41
RNF41-202ENST00000394013 C1orf147Q96MC9 270 aaPredicted RBP12.51□□□□□ -0.41
RNF41-202ENST00000394013 FOXB1Q99853 325 aa12.51□□□□□ -0.41
RNF41-202ENST00000394013 CHST6Q9GZX3 395 aa12.51□□□□□ -0.41
RNF41-202ENST00000394013 MEGF11A6BM72 1044 aa12.51□□□□□ -0.41
RNF41-202ENST00000394013 FABP7O15540 132 aa12.51□□□□□ -0.41
RNF41-202ENST00000394013 SGCEO43556 437 aa12.51□□□□□ -0.41
RNF41-202ENST00000394013 SYNGR3O43761 229 aa12.51□□□□□ -0.41
RNF41-202ENST00000394013 SPINK2P20155 84 aa12.51□□□□□ -0.41
RNF41-202ENST00000394013 CCL11P51671 97 aa12.51□□□□□ -0.41
RNF41-202ENST00000394013 PPIAP62937 165 aaKnown RBP12.51□□□□□ -0.41
RNF41-202ENST00000394013 OR52W1Q6IF63 320 aa12.51□□□□□ -0.41
RNF41-202ENST00000394013 GPX8Q8TED1 209 aa12.51□□□□□ -0.41
RNF41-202ENST00000394013 METTL17Q9H7H0 456 aaPredicted RBP12.51□□□□□ -0.41
RNF41-202ENST00000394013 ASCL3Q9NQ33 180 aa12.51□□□□□ -0.41
RNF41-202ENST00000394013 PAIP2BQ9ULR5 123 aaKnown RBP12.51□□□□□ -0.41
RNF41-202ENST00000394013 PTPRBP23467 1997 aa12.5□□□□□ -0.41
RNF41-202ENST00000394013 TNRC6AQ8NDV7 1962 aaKnown RBP12.5□□□□□ -0.41
RNF41-202ENST00000394013 VSIG10L2P0DP72 767 aa12.5□□□□□ -0.41
RNF41-202ENST00000394013 SLC22A24Q8N4F4 322 aa12.5□□□□□ -0.41
RNF41-202ENST00000394013 NKAIN3Q8N8D7 197 aa12.5□□□□□ -0.41
RNF41-202ENST00000394013 CPNE4Q96A23 557 aaPredicted RBP12.5□□□□□ -0.41
RNF41-202ENST00000394013 PNPLA2Q96AD5 504 aa12.5□□□□□ -0.41
RNF41-202ENST00000394013 SLC17A5Q9NRA2 495 aa12.5□□□□□ -0.41
RNF41-202ENST00000394013 PIGLQ9Y2B2 252 aa12.5□□□□□ -0.41
RNF41-202ENST00000394013 NOSIPQ9Y314 301 aaKnown RBP12.5□□□□□ -0.41
RNF41-202ENST00000394013 SOCS1O15524 211 aa12.5□□□□□ -0.41
RNF41-202ENST00000394013 NME2P1O60361 137 aa12.5□□□□□ -0.41
RNF41-202ENST00000394013 MPIG6BO95866 241 aa12.5□□□□□ -0.41
RNF41-202ENST00000394013 ECDO95905 644 aaPredicted RBP12.5□□□□□ -0.41
RNF41-202ENST00000394013 PLATP00750 562 aa12.5□□□□□ -0.41
RNF41-202ENST00000394013 ZNF708P17019 499 aa12.5□□□□□ -0.41
RNF41-202ENST00000394013 CCL1P22362 96 aa12.5□□□□□ -0.41
RNF41-202ENST00000394013 NME2P22392 152 aa12.5□□□□□ -0.41
RNF41-202ENST00000394013 CRYGSP22914 178 aa12.5□□□□□ -0.41
RNF41-202ENST00000394013 TNK1Q13470 666 aa12.5□□□□□ -0.41
RNF41-202ENST00000394013 ZNF782Q6ZMW2 699 aaPredicted RBP12.5□□□□□ -0.41
RNF41-202ENST00000394013 OR11H4Q8NGC9 324 aa12.5□□□□□ -0.41
RNF41-202ENST00000394013 GRPEL2Q8TAA5 225 aa12.5□□□□□ -0.41
RNF41-202ENST00000394013 SELENOIQ9C0D9 397 aa12.5□□□□□ -0.41
RNF41-202ENST00000394013 WNT5BQ9H1J7 359 aa12.5□□□□□ -0.41
RNF41-202ENST00000394013 ZNF552Q9H707 407 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms