RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 FGD2Q7Z6J4 655 aa15.12■□□□□ 0.01
THUMPD2-201ENST00000378727 CADM3Q8N126 398 aa15.12■□□□□ 0.01
THUMPD2-201ENST00000378727 CELF2-AS1Q8N7Q2 184 aa15.12■□□□□ 0.01
THUMPD2-201ENST00000378727 OR2AE1Q8NHA4 323 aa15.12■□□□□ 0.01
THUMPD2-201ENST00000378727 GCDHQ92947 438 aaPredicted RBP15.12■□□□□ 0.01
THUMPD2-201ENST00000378727 RNF121Q9H920 327 aa15.12■□□□□ 0.01
THUMPD2-201ENST00000378727 B3GNT2Q9NY97 397 aa15.12■□□□□ 0.01
THUMPD2-201ENST00000378727 IGKV1-9A0A0C4DH69 117 aa15.12■□□□□ 0.01
THUMPD2-201ENST00000378727 GSTZ1O43708 216 aaPredicted RBP15.12■□□□□ 0.01
THUMPD2-201ENST00000378727 CTAG2O75638 210 aa15.12■□□□□ 0.01
THUMPD2-201ENST00000378727 ARSBP15848 533 aa15.12■□□□□ 0.01
THUMPD2-201ENST00000378727 TMEM69Q5SWH9 247 aa15.12■□□□□ 0.01
THUMPD2-201ENST00000378727 ZNF57Q68EA5 555 aaPredicted RBP15.12■□□□□ 0.01
THUMPD2-201ENST00000378727 ANKRD16Q6P6B7 361 aa15.12■□□□□ 0.01
THUMPD2-201ENST00000378727 SORCS2Q96PQ0 1159 aa15.12■□□□□ 0.01
THUMPD2-201ENST00000378727 METTL17Q9H7H0 456 aaPredicted RBP15.12■□□□□ 0.01
THUMPD2-201ENST00000378727 AUNIPQ9H7T9 357 aa15.12■□□□□ 0.01
THUMPD2-201ENST00000378727 LUZP4Q9P127 313 aa15.12■□□□□ 0.01
THUMPD2-201ENST00000378727 RABL2AQ9UBK7 228 aaPredicted RBP15.12■□□□□ 0.01
THUMPD2-201ENST00000378727 RABL2BQ9UNT1 228 aa15.12■□□□□ 0.01
THUMPD2-201ENST00000378727 MKRN2OSH3BPM6 223 aa15.11■□□□□ 0.01
THUMPD2-201ENST00000378727 LYRM1O43325 122 aa15.11■□□□□ 0.01
THUMPD2-201ENST00000378727 LCATP04180 440 aa15.11■□□□□ 0.01
THUMPD2-201ENST00000378727 MPGP29372 298 aa15.11■□□□□ 0.01
THUMPD2-201ENST00000378727 MNDAP41218 407 aa15.11■□□□□ 0.01
THUMPD2-201ENST00000378727 C9orf106Q8NAJ2 232 aa15.11■□□□□ 0.01
THUMPD2-201ENST00000378727 SMIM4Q8WVI0 70 aa15.11■□□□□ 0.01
THUMPD2-201ENST00000378727 SPACA5Q96QH8 159 aa15.11■□□□□ 0.01
THUMPD2-201ENST00000378727 ATPIF1Q9UII2 106 aa15.11■□□□□ 0.01
THUMPD2-201ENST00000378727 SVILO95425 2214 aa15.11■□□□□ 0.01
THUMPD2-201ENST00000378727 CACNA1GO43497 2377 aa15.1■□□□□ 0.01
THUMPD2-201ENST00000378727 GTF3C1Q12789 2109 aa15.1■□□□□ 0.01
THUMPD2-201ENST00000378727 LOC100509620A0A075B734 347 aa15.1■□□□□ 0.01
THUMPD2-201ENST00000378727 DLL1O00548 723 aa15.1■□□□□ 0.01
THUMPD2-201ENST00000378727 KDM4BO94953 1096 aa15.1■□□□□ 0.01
THUMPD2-201ENST00000378727 PTHLHP12272 177 aa15.1■□□□□ 0.01
THUMPD2-201ENST00000378727 FAHP16930 419 aa15.1■□□□□ 0.01
THUMPD2-201ENST00000378727 KIR2DL3P43628 341 aa15.1■□□□□ 0.01
THUMPD2-201ENST00000378727 MAP2K3P46734 347 aa15.1■□□□□ 0.01
THUMPD2-201ENST00000378727 INPP1P49441 399 aa15.1■□□□□ 0.01
THUMPD2-201ENST00000378727 SRP9P49458 86 aaKnown RBP15.1■□□□□ 0.01
THUMPD2-201ENST00000378727 TAS2R20P59543 309 aa15.1■□□□□ 0.01
THUMPD2-201ENST00000378727 ACSF3Q4G176 576 aaPredicted RBP15.1■□□□□ 0.01
THUMPD2-201ENST00000378727 RPUSD3Q6P087 351 aaKnown RBP15.1■□□□□ 0.01
THUMPD2-201ENST00000378727 TFAP2EQ6VUC0 442 aa15.1■□□□□ 0.01
THUMPD2-201ENST00000378727 FAM214BQ7L5A3 538 aa15.1■□□□□ 0.01
THUMPD2-201ENST00000378727 OR1K1Q8NGR3 316 aa15.1■□□□□ 0.01
THUMPD2-201ENST00000378727 SNRNP27Q8WVK2 155 aaKnown RBP15.1■□□□□ 0.01
THUMPD2-201ENST00000378727 ABHD17AQ96GS6 310 aa15.1■□□□□ 0.01
THUMPD2-201ENST00000378727 REEP6Q96HR9 211 aa15.1■□□□□ 0.01
THUMPD2-201ENST00000378727 UQCC2Q9BRT2 126 aa15.1■□□□□ 0.01
THUMPD2-201ENST00000378727 CIB4A0PJX0 185 aa15.1■□□□□ 0.01
THUMPD2-201ENST00000378727 OR14I1A6ND48 311 aa15.1■□□□□ 0.01
THUMPD2-201ENST00000378727 K7ENP7 123 aa15.1■□□□□ 0.01
THUMPD2-201ENST00000378727 XRCC3O43542 346 aa15.1■□□□□ 0.01
THUMPD2-201ENST00000378727 ERCC1P07992 297 aaPredicted RBP15.1■□□□□ 0.01
THUMPD2-201ENST00000378727 FAM157BP0CG42 384 aa15.1■□□□□ 0.01
THUMPD2-201ENST00000378727 ACKR3P25106 362 aa15.1■□□□□ 0.01
THUMPD2-201ENST00000378727 THBS4P35443 961 aa15.1■□□□□ 0.01
THUMPD2-201ENST00000378727 TNK1Q13470 666 aa15.1■□□□□ 0.01
THUMPD2-201ENST00000378727 DMRTC1Q5HYR2 192 aa15.1■□□□□ 0.01
THUMPD2-201ENST00000378727 OR10K2Q6IF99 312 aa15.1■□□□□ 0.01
THUMPD2-201ENST00000378727 INO80CQ6PI98 192 aaPredicted RBP15.1■□□□□ 0.01
THUMPD2-201ENST00000378727 SSC4DQ8WTU2 575 aa15.1■□□□□ 0.01
THUMPD2-201ENST00000378727 BCL2L2Q92843 193 aaPredicted RBP15.1■□□□□ 0.01
THUMPD2-201ENST00000378727 WNT2BQ93097 391 aa15.1■□□□□ 0.01
THUMPD2-201ENST00000378727 RBFOX1Q9NWB1 397 aaKnown RBP15.1■□□□□ 0.01
THUMPD2-201ENST00000378727 MYEF2Q9P2K5 600 aaKnown RBP15.1■□□□□ 0.01
THUMPD2-201ENST00000378727 DKK4Q9UBT3 224 aa15.1■□□□□ 0.01
THUMPD2-201ENST00000378727 PIGLQ9Y2B2 252 aa15.1■□□□□ 0.01
THUMPD2-201ENST00000378727 MTRF1O75570 445 aaKnown RBP15.09■□□□□ 0.01
THUMPD2-201ENST00000378727 CD79AP11912 226 aa15.09■□□□□ 0.01
THUMPD2-201ENST00000378727 ZNF93P35789 620 aaPredicted RBP15.09■□□□□ 0.01
THUMPD2-201ENST00000378727 HIKESHIQ53FT3 197 aa15.09■□□□□ 0.01
THUMPD2-201ENST00000378727 CCDC54Q8NEL0 328 aa15.09■□□□□ 0.01
THUMPD2-201ENST00000378727 MMP28Q9H239 520 aa15.09■□□□□ 0.01
THUMPD2-201ENST00000378727 MYO7BQ6PIF6 2116 aa15.09■□□□□ 0.01
THUMPD2-201ENST00000378727 GGT3PA6NGU5 568 aa15.08■□□□□ 0.01
THUMPD2-201ENST00000378727 AHRRA9YTQ3 701 aa15.08■□□□□ 0.01
THUMPD2-201ENST00000378727 EDN3P14138 238 aa15.08■□□□□ 0.01
THUMPD2-201ENST00000378727 GABRA1P14867 456 aa15.08■□□□□ 0.01
THUMPD2-201ENST00000378727 PRSS12P56730 875 aa15.08■□□□□ 0.01
THUMPD2-201ENST00000378727 RAB1AP62820 205 aa15.08■□□□□ 0.01
THUMPD2-201ENST00000378727 GPR176Q14439 515 aa15.08■□□□□ 0.01
THUMPD2-201ENST00000378727 UBE2V2Q15819 145 aa15.08■□□□□ 0.01
THUMPD2-201ENST00000378727 TBR1Q16650 682 aa15.08■□□□□ 0.01
THUMPD2-201ENST00000378727 HACD4Q5VWC8 232 aa15.08■□□□□ 0.01
THUMPD2-201ENST00000378727 CRIP3Q6Q6R5 217 aa15.08■□□□□ 0.01
THUMPD2-201ENST00000378727 GLCCI1Q86VQ1 547 aa15.08■□□□□ 0.01
THUMPD2-201ENST00000378727 OR52I2Q8NH67 350 aa15.08■□□□□ 0.01
THUMPD2-201ENST00000378727 ZC3HAV1LQ96H79 300 aaKnown RBP15.08■□□□□ 0.01
THUMPD2-201ENST00000378727 C1QTNF5Q9BXJ0 243 aa15.08■□□□□ 0.01
THUMPD2-201ENST00000378727 CHST5Q9GZS9 411 aa15.08■□□□□ 0.01
THUMPD2-201ENST00000378727 GABARAPH6UMI1 98 aa15.08■□□□□ 0
THUMPD2-201ENST00000378727 ALDOBP05062 364 aa15.08■□□□□ 0
THUMPD2-201ENST00000378727 COX5BP10606 129 aa15.08■□□□□ 0
THUMPD2-201ENST00000378727 HOXD11P31277 338 aaPredicted RBP15.08■□□□□ 0
THUMPD2-201ENST00000378727 ARR3P36575 388 aa15.08■□□□□ 0
THUMPD2-201ENST00000378727 KIR2DL2P43627 348 aaPredicted RBP15.08■□□□□ 0
THUMPD2-201ENST00000378727 QRFPP83859 136 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms