RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 EMDP50402 254 aa10.43□□□□□ -0.74
VCL-202ENST00000372755 BAP18Q8IXM2 172 aa10.43□□□□□ -0.74
VCL-202ENST00000372755 ETFBKMTQ8IXQ9 262 aa10.43□□□□□ -0.74
VCL-202ENST00000372755 NOXO1Q8NFA2 376 aa10.43□□□□□ -0.74
VCL-202ENST00000372755 APOBEC3DQ96AK3 386 aaPredicted RBP10.43□□□□□ -0.74
VCL-202ENST00000372755 A0A1W2PPC4 97 aa10.43□□□□□ -0.74
VCL-202ENST00000372755 ALX3O95076 343 aa10.43□□□□□ -0.74
VCL-202ENST00000372755 MGMTP16455 207 aa10.43□□□□□ -0.74
VCL-202ENST00000372755 MARCH1Q8TCQ1 289 aa10.43□□□□□ -0.74
VCL-202ENST00000372755 RXFP4Q8TDU9 374 aa10.43□□□□□ -0.74
VCL-202ENST00000372755 RTN4IP1Q8WWV3 396 aaPredicted RBP10.43□□□□□ -0.74
VCL-202ENST00000372755 ARSGQ96EG1 525 aa10.43□□□□□ -0.74
VCL-202ENST00000372755 CXorf58Q96LI9 332 aa10.43□□□□□ -0.74
VCL-202ENST00000372755 TMEM9BQ9NQ34 198 aa10.43□□□□□ -0.74
VCL-202ENST00000372755 GOLGA4Q13439 2230 aaKnown RBP10.43□□□□□ -0.74
VCL-202ENST00000372755 SERPINE3A8MV23 424 aa10.43□□□□□ -0.74
VCL-202ENST00000372755 NDUFB3O43676 98 aa10.43□□□□□ -0.74
VCL-202ENST00000372755 CRYABP02511 175 aaKnown RBP10.43□□□□□ -0.74
VCL-202ENST00000372755 CD3DP04234 171 aa10.43□□□□□ -0.74
VCL-202ENST00000372755 TNFRSF1AP19438 455 aa10.43□□□□□ -0.74
VCL-202ENST00000372755 DSCR4P56555 118 aaPredicted RBP10.43□□□□□ -0.74
VCL-202ENST00000372755 CLDN20P56880 219 aa10.43□□□□□ -0.74
VCL-202ENST00000372755 TCTE3Q8IZS6 198 aa10.43□□□□□ -0.74
VCL-202ENST00000372755 KLHDC1Q8N7A1 406 aa10.43□□□□□ -0.74
VCL-202ENST00000372755 WBP2Q969T9 261 aa10.43□□□□□ -0.74
VCL-202ENST00000372755 HES4Q9HCC6 221 aa10.43□□□□□ -0.74
VCL-202ENST00000372755 FOXJ3Q9UPW0 622 aa10.43□□□□□ -0.74
VCL-202ENST00000372755 RCL1Q9Y2P8 373 aaKnown RBP10.43□□□□□ -0.74
VCL-202ENST00000372755 IGHV3-15A0A0B4J1V0 119 aa10.43□□□□□ -0.74
VCL-202ENST00000372755 A0A0B4J203 849 aa10.43□□□□□ -0.74
VCL-202ENST00000372755 CLEC18AA5D8T8 446 aa10.43□□□□□ -0.74
VCL-202ENST00000372755 UPK1AO00322 258 aa10.43□□□□□ -0.74
VCL-202ENST00000372755 ZNF121P58317 390 aaPredicted RBP10.43□□□□□ -0.74
VCL-202ENST00000372755 PAQR6Q6TCH4 344 aa10.43□□□□□ -0.74
VCL-202ENST00000372755 CLEC18CQ8NCF0 446 aa10.43□□□□□ -0.74
VCL-202ENST00000372755 NT5CQ8TCD5 201 aa10.43□□□□□ -0.74
VCL-202ENST00000372755 PATE1Q8WXA2 126 aa10.43□□□□□ -0.74
VCL-202ENST00000372755 DUS3LQ96G46 650 aaKnown RBP10.43□□□□□ -0.74
VCL-202ENST00000372755 SPACA5Q96QH8 159 aa10.43□□□□□ -0.74
VCL-202ENST00000372755 RNF167Q9H6Y7 350 aa10.43□□□□□ -0.74
VCL-202ENST00000372755 TUBAL3A6NHL2 446 aa10.42□□□□□ -0.74
VCL-202ENST00000372755 PRRT4C9JH25 899 aa10.42□□□□□ -0.74
VCL-202ENST00000372755 HRO43593 1189 aa10.42□□□□□ -0.74
VCL-202ENST00000372755 KLK8O60259 260 aa10.42□□□□□ -0.74
VCL-202ENST00000372755 FCMRO60667 390 aa10.42□□□□□ -0.74
VCL-202ENST00000372755 B4GALT1P15291 398 aa10.42□□□□□ -0.74
VCL-202ENST00000372755 ZBTB25P24278 435 aa10.42□□□□□ -0.74
VCL-202ENST00000372755 RANP62826 216 aaKnown RBP10.42□□□□□ -0.74
VCL-202ENST00000372755 OR2M7Q8NG81 312 aa10.42□□□□□ -0.74
VCL-202ENST00000372755 PDFQ9HBH1 243 aa10.42□□□□□ -0.74
VCL-202ENST00000372755 MYH1P12882 1939 aa10.42□□□□□ -0.74
VCL-202ENST00000372755 TMEM30CPA0ZSE6 113 aa10.42□□□□□ -0.74
VCL-202ENST00000372755 EVX1P49640 407 aa10.42□□□□□ -0.74
VCL-202ENST00000372755 CADM3Q8N126 398 aa10.42□□□□□ -0.74
VCL-202ENST00000372755 OR4S1Q8NGB4 309 aa10.42□□□□□ -0.74
VCL-202ENST00000372755 C2CD4CQ8TF44 421 aa10.42□□□□□ -0.74
VCL-202ENST00000372755 FGF20Q9NP95 211 aaPredicted RBP10.42□□□□□ -0.74
VCL-202ENST00000372755 SLC22A13Q9Y226 551 aa10.42□□□□□ -0.74
VCL-202ENST00000372755 PRR27Q6MZM9 219 aa10.42□□□□□ -0.74
VCL-202ENST00000372755 DGAT2L6Q6ZPD8 337 aa10.42□□□□□ -0.74
VCL-202ENST00000372755 Q8IYB0 196 aa10.42□□□□□ -0.74
VCL-202ENST00000372755 TMEM229BQ8NBD8 167 aa10.42□□□□□ -0.74
VCL-202ENST00000372755 TINAGL1Q9GZM7 467 aaPredicted RBP10.42□□□□□ -0.74
VCL-202ENST00000372755 SLCO1C1Q9NYB5 712 aa10.42□□□□□ -0.74
VCL-202ENST00000372755 ZNF785A8K8V0 405 aa10.42□□□□□ -0.74
VCL-202ENST00000372755 ACSM4P0C7M7 580 aa10.42□□□□□ -0.74
VCL-202ENST00000372755 ANKRD33Q7Z3H0 272 aa10.42□□□□□ -0.74
VCL-202ENST00000372755 ZDHHC11Q9H8X9 412 aa10.42□□□□□ -0.74
VCL-202ENST00000372755 OCIAD1Q9NX40 245 aa10.42□□□□□ -0.74
VCL-202ENST00000372755 B9D1Q9UPM9 204 aa10.42□□□□□ -0.74
VCL-202ENST00000372755 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.42□□□□□ -0.74
VCL-202ENST00000372755 SMIM18P0DKX4 95 aa10.42□□□□□ -0.74
VCL-202ENST00000372755 GPR3P46089 330 aa10.42□□□□□ -0.74
VCL-202ENST00000372755 AMTP48728 403 aa10.42□□□□□ -0.74
VCL-202ENST00000372755 FABP5Q01469 135 aa10.42□□□□□ -0.74
VCL-202ENST00000372755 OXA1LQ15070 435 aa10.42□□□□□ -0.74
VCL-202ENST00000372755 CYHR1Q6ZMK1 362 aa10.42□□□□□ -0.74
VCL-202ENST00000372755 SSX7Q7RTT5 188 aa10.42□□□□□ -0.74
VCL-202ENST00000372755 GPR32P1Q8NGA4 272 aa10.42□□□□□ -0.74
VCL-202ENST00000372755 OR13C5Q8NGS8 318 aa10.42□□□□□ -0.74
VCL-202ENST00000372755 ST8SIA4Q92187 359 aa10.42□□□□□ -0.74
VCL-202ENST00000372755 AAMDCQ9H7C9 122 aa10.42□□□□□ -0.74
VCL-202ENST00000372755 C12orf10Q9HB07 376 aa10.42□□□□□ -0.74
VCL-202ENST00000372755 SLC25A37Q9NYZ2 338 aa10.42□□□□□ -0.74
VCL-202ENST00000372755 NCBP2LA6PVI3 153 aaKnown RBP10.41□□□□□ -0.74
VCL-202ENST00000372755 GPR31O00270 319 aa10.41□□□□□ -0.74
VCL-202ENST00000372755 TCAPO15273 167 aa10.41□□□□□ -0.74
VCL-202ENST00000372755 ZNF17P17021 662 aa10.41□□□□□ -0.74
VCL-202ENST00000372755 MPGP29372 298 aa10.41□□□□□ -0.74
VCL-202ENST00000372755 FOXF1Q12946 379 aa10.41□□□□□ -0.74
VCL-202ENST00000372755 AQP6Q13520 282 aa10.41□□□□□ -0.74
VCL-202ENST00000372755 OR1J1Q8NGS3 322 aa10.41□□□□□ -0.74
VCL-202ENST00000372755 TAAR9Q96RI9 348 aa10.41□□□□□ -0.74
VCL-202ENST00000372755 CLEC1BQ9P126 229 aa10.41□□□□□ -0.74
VCL-202ENST00000372755 MYH6P13533 1939 aa10.41□□□□□ -0.74
VCL-202ENST00000372755 TRAV1-2A0A0B4J238 106 aa10.41□□□□□ -0.74
VCL-202ENST00000372755 ZNF320A2RRD8 509 aa10.41□□□□□ -0.74
VCL-202ENST00000372755 BCL2L11O43521 198 aa10.41□□□□□ -0.74
VCL-202ENST00000372755 PIAS2O75928 621 aa10.41□□□□□ -0.74
VCL-202ENST00000372755 OR2J3O76001 311 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms