RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 TNFRSF1AP19438 455 aa18.95■□□□□ 0.62
ECHDC1-203ENST00000368291 MAB21L1Q13394 359 aa18.95■□□□□ 0.62
ECHDC1-203ENST00000368291 C6orf52Q5T4I8 152 aa18.95■□□□□ 0.62
ECHDC1-203ENST00000368291 AVPI1Q5T686 147 aa18.95■□□□□ 0.62
ECHDC1-203ENST00000368291 SSX6Q7RTT6 188 aa18.95■□□□□ 0.62
ECHDC1-203ENST00000368291 MSI2Q96DH6 328 aaKnown RBP18.95■□□□□ 0.62
ECHDC1-203ENST00000368291 PGAM5Q96HS1 289 aa18.95■□□□□ 0.62
ECHDC1-203ENST00000368291 MNTQ99583 582 aa18.95■□□□□ 0.62
ECHDC1-203ENST00000368291 NARFLQ9H6Q4 476 aa18.95■□□□□ 0.62
ECHDC1-203ENST00000368291 FAM118AQ9NWS6 357 aa18.95■□□□□ 0.62
ECHDC1-203ENST00000368291 FAM206AQ9NX38 181 aa18.95■□□□□ 0.62
ECHDC1-203ENST00000368291 AASSQ9UDR5 926 aa18.95■□□□□ 0.62
ECHDC1-203ENST00000368291 WIPI2Q9Y4P8 454 aa18.95■□□□□ 0.62
ECHDC1-203ENST00000368291 NIPBLQ6KC79 2804 aaeCLIP18.95■□□□□ 0.62
ECHDC1-203ENST00000368291 INAFM1C9JVW0 142 aa18.94■□□□□ 0.62
ECHDC1-203ENST00000368291 MAGEB4O15481 346 aaPredicted RBP18.94■□□□□ 0.62
ECHDC1-203ENST00000368291 APOL3O95236 402 aa18.94■□□□□ 0.62
ECHDC1-203ENST00000368291 CA6P23280 308 aa18.94■□□□□ 0.62
ECHDC1-203ENST00000368291 GZMKP49863 264 aa18.94■□□□□ 0.62
ECHDC1-203ENST00000368291 MVKQ03426 396 aa18.94■□□□□ 0.62
ECHDC1-203ENST00000368291 OCLNQ16625 522 aa18.94■□□□□ 0.62
ECHDC1-203ENST00000368291 TIGD6Q17RP2 521 aa18.94■□□□□ 0.62
ECHDC1-203ENST00000368291 CYB5R2Q6BCY4 276 aa18.94■□□□□ 0.62
ECHDC1-203ENST00000368291 ZNF322Q6U7Q0 402 aaPredicted RBP18.94■□□□□ 0.62
ECHDC1-203ENST00000368291 OR8B12Q8NGG6 310 aa18.94■□□□□ 0.62
ECHDC1-203ENST00000368291 HPS1Q92902 700 aa18.94■□□□□ 0.62
ECHDC1-203ENST00000368291 C1orf159Q96HA4 380 aa18.94■□□□□ 0.62
ECHDC1-203ENST00000368291 LYZL4Q96KX0 146 aa18.94■□□□□ 0.62
ECHDC1-203ENST00000368291 MROQ9BYG7 248 aa18.94■□□□□ 0.62
ECHDC1-203ENST00000368291 OR10A2Q9H208 303 aa18.94■□□□□ 0.62
ECHDC1-203ENST00000368291 GCM1Q9NP62 436 aa18.94■□□□□ 0.62
ECHDC1-203ENST00000368291 GMPPBQ9Y5P6 360 aa18.94■□□□□ 0.62
ECHDC1-203ENST00000368291 LOC100130705A0A1B0GUX0 176 aa18.93■□□□□ 0.62
ECHDC1-203ENST00000368291 ENTPD6O75354 484 aa18.93■□□□□ 0.62
ECHDC1-203ENST00000368291 ZNF254O75437 659 aa18.93■□□□□ 0.62
ECHDC1-203ENST00000368291 SRSF10O75494 262 aaKnown RBP18.93■□□□□ 0.62
ECHDC1-203ENST00000368291 ZNF16P17020 682 aaPredicted RBP18.93■□□□□ 0.62
ECHDC1-203ENST00000368291 HOXB4P17483 251 aaPredicted RBP18.93■□□□□ 0.62
ECHDC1-203ENST00000368291 DCTDP32321 178 aa18.93■□□□□ 0.62
ECHDC1-203ENST00000368291 LMO4P61968 165 aa18.93■□□□□ 0.62
ECHDC1-203ENST00000368291 POU4F2Q12837 409 aa18.93■□□□□ 0.62
ECHDC1-203ENST00000368291 TMED1Q13445 227 aa18.93■□□□□ 0.62
ECHDC1-203ENST00000368291 LPCAT4Q643R3 524 aa18.93■□□□□ 0.62
ECHDC1-203ENST00000368291 ENTHD1Q8IYW4 607 aa18.93■□□□□ 0.62
ECHDC1-203ENST00000368291 RFKQ969G6 155 aa18.93■□□□□ 0.62
ECHDC1-203ENST00000368291 SIGLEC11Q96RL6 698 aa18.93■□□□□ 0.62
ECHDC1-203ENST00000368291 APOL4Q9BPW4 351 aa18.93■□□□□ 0.62
ECHDC1-203ENST00000368291 TMEM106BQ9NUM4 274 aa18.93■□□□□ 0.62
ECHDC1-203ENST00000368291 MRPL15Q9P015 296 aaKnown RBP18.93■□□□□ 0.62
ECHDC1-203ENST00000368291 PPP1R3CQ9UQK1 317 aa18.93■□□□□ 0.62
ECHDC1-203ENST00000368291 IGHV3-64DA0A0J9YX35 117 aa18.93■□□□□ 0.62
ECHDC1-203ENST00000368291 ZNF670-ZNF695F2Z2N8 137 aa18.93■□□□□ 0.62
ECHDC1-203ENST00000368291 PHYHO14832 338 aa18.93■□□□□ 0.62
ECHDC1-203ENST00000368291 SLC16A6O15403 523 aa18.93■□□□□ 0.62
ECHDC1-203ENST00000368291 PNPP00491 289 aa18.93■□□□□ 0.62
ECHDC1-203ENST00000368291 DDOSTP39656 456 aa18.93■□□□□ 0.62
ECHDC1-203ENST00000368291 GSK3AP49840 483 aa18.93■□□□□ 0.62
ECHDC1-203ENST00000368291 LRRC36Q1X8D7 754 aa18.93■□□□□ 0.62
ECHDC1-203ENST00000368291 GFOD2Q3B7J2 385 aa18.93■□□□□ 0.62
ECHDC1-203ENST00000368291 GALNT4Q8N4A0 578 aa18.93■□□□□ 0.62
ECHDC1-203ENST00000368291 TBX5Q99593 518 aa18.93■□□□□ 0.62
ECHDC1-203ENST00000368291 RGCCQ9H4X1 137 aa18.93■□□□□ 0.62
ECHDC1-203ENST00000368291 YAE1D1Q9NRH1 226 aa18.93■□□□□ 0.62
ECHDC1-203ENST00000368291 MRM2Q9UI43 246 aaKnown RBP18.93■□□□□ 0.62
ECHDC1-203ENST00000368291 IKZF2Q9UKS7 526 aa18.93■□□□□ 0.62
ECHDC1-203ENST00000368291 NF1P21359 2839 aa18.92■□□□□ 0.62
ECHDC1-203ENST00000368291 TMEM269A0A1B0GVZ9 245 aa18.92■□□□□ 0.62
ECHDC1-203ENST00000368291 A0A1W2PQL4 384 aaPredicted RBP18.92■□□□□ 0.62
ECHDC1-203ENST00000368291 OR2T7P0C7T2 308 aa18.92■□□□□ 0.62
ECHDC1-203ENST00000368291 PEX2P28328 305 aa18.92■□□□□ 0.62
ECHDC1-203ENST00000368291 PMELP40967 661 aa18.92■□□□□ 0.62
ECHDC1-203ENST00000368291 CD200P41217 278 aa18.92■□□□□ 0.62
ECHDC1-203ENST00000368291 SRP9P49458 86 aaKnown RBP18.92■□□□□ 0.62
ECHDC1-203ENST00000368291 MMP16P51512 607 aa18.92■□□□□ 0.62
ECHDC1-203ENST00000368291 RIDAP52758 137 aaKnown RBP18.92■□□□□ 0.62
ECHDC1-203ENST00000368291 EGR3Q06889 387 aa18.92■□□□□ 0.62
ECHDC1-203ENST00000368291 MFGE8Q08431 387 aaPredicted RBP18.92■□□□□ 0.62
ECHDC1-203ENST00000368291 OR8B8Q15620 311 aa18.92■□□□□ 0.62
ECHDC1-203ENST00000368291 ZNF684Q5T5D7 378 aa18.92■□□□□ 0.62
ECHDC1-203ENST00000368291 MEDAGQ5VYS4 303 aa18.92■□□□□ 0.62
ECHDC1-203ENST00000368291 OR2T27Q8NH04 317 aa18.92■□□□□ 0.62
ECHDC1-203ENST00000368291 RHOXF1Q8NHV9 184 aa18.92■□□□□ 0.62
ECHDC1-203ENST00000368291 ZNF420Q8TAQ5 688 aaPredicted RBP18.92■□□□□ 0.62
ECHDC1-203ENST00000368291 DVL3Q92997 716 aaPredicted RBP18.92■□□□□ 0.62
ECHDC1-203ENST00000368291 PPP1R14AQ96A00 147 aa18.92■□□□□ 0.62
ECHDC1-203ENST00000368291 RDH12Q96NR8 316 aa18.92■□□□□ 0.62
ECHDC1-203ENST00000368291 SLC22A4Q9H015 551 aa18.92■□□□□ 0.62
ECHDC1-203ENST00000368291 PPP1R3EQ9H7J1 279 aa18.92■□□□□ 0.62
ECHDC1-203ENST00000368291 SMPD3Q9NY59 655 aaPredicted RBP18.92■□□□□ 0.62
ECHDC1-203ENST00000368291 ARHGAP32A7KAX9 2087 aa18.91■□□□□ 0.62
ECHDC1-203ENST00000368291 ACOD1A6NK06 481 aa18.91■□□□□ 0.62
ECHDC1-203ENST00000368291 GMDSO60547 372 aa18.91■□□□□ 0.62
ECHDC1-203ENST00000368291 IGLV3-1P01715 115 aa18.91■□□□□ 0.62
ECHDC1-203ENST00000368291 CFL1P23528 166 aaKnown RBP18.91■□□□□ 0.62
ECHDC1-203ENST00000368291 ACKR3P25106 362 aa18.91■□□□□ 0.62
ECHDC1-203ENST00000368291 GATA4P43694 442 aa18.91■□□□□ 0.62
ECHDC1-203ENST00000368291 RIPPLY3P57055 190 aa18.91■□□□□ 0.62
ECHDC1-203ENST00000368291 ELF3P78545 371 aaPredicted RBP18.91■□□□□ 0.62
ECHDC1-203ENST00000368291 SLC3A1Q07837 685 aa18.91■□□□□ 0.62
ECHDC1-203ENST00000368291 OR8G1Q15617 311 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms