RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 LINC01560Q8TB33 94 aa1.89□□□□□ -2.11
ECHDC1-201ENST00000368287 GLYATL2Q8WU03 294 aa1.89□□□□□ -2.11
ECHDC1-201ENST00000368287 RAB1CQ92928 201 aa1.89□□□□□ -2.11
ECHDC1-201ENST00000368287 TMEM243Q9BU79 118 aa1.89□□□□□ -2.11
ECHDC1-201ENST00000368287 ING2Q9H160 280 aa1.89□□□□□ -2.11
ECHDC1-201ENST00000368287 CRLF2Q9HC73 371 aa1.89□□□□□ -2.11
ECHDC1-201ENST00000368287 FBXO6Q9NRD1 293 aaPredicted RBP1.89□□□□□ -2.11
ECHDC1-201ENST00000368287 RGS18Q9NS28 235 aa1.89□□□□□ -2.11
ECHDC1-201ENST00000368287 MRPL22Q9NWU5 206 aaKnown RBP1.89□□□□□ -2.11
ECHDC1-201ENST00000368287 HYOU1Q9Y4L1 999 aa1.89□□□□□ -2.11
ECHDC1-201ENST00000368287 PTPRTO14522 1441 aa1.89□□□□□ -2.11
ECHDC1-201ENST00000368287 IGHV3-72A0A0B4J1Y9 119 aa1.88□□□□□ -2.11
ECHDC1-201ENST00000368287 GOLGA6L7A0A1B0GV03 622 aa1.88□□□□□ -2.11
ECHDC1-201ENST00000368287 PDZK1P1A8MUH7 402 aa1.88□□□□□ -2.11
ECHDC1-201ENST00000368287 ANKRD65E5RJM6 399 aa1.88□□□□□ -2.11
ECHDC1-201ENST00000368287 HLA-DQB1P01920 261 aa1.88□□□□□ -2.11
ECHDC1-201ENST00000368287 POLR2MP0CAP2 368 aa1.88□□□□□ -2.11
ECHDC1-201ENST00000368287 CD82P27701 267 aa1.88□□□□□ -2.11
ECHDC1-201ENST00000368287 PFN2P35080 140 aa1.88□□□□□ -2.11
ECHDC1-201ENST00000368287 GGT2P36268 569 aa1.88□□□□□ -2.11
ECHDC1-201ENST00000368287 MYCNOSP40205 109 aa1.88□□□□□ -2.11
ECHDC1-201ENST00000368287 PPICP45877 212 aa1.88□□□□□ -2.11
ECHDC1-201ENST00000368287 PRSS8Q16651 343 aa1.88□□□□□ -2.11
ECHDC1-201ENST00000368287 ZNF829Q3KNS6 432 aaPredicted RBP1.88□□□□□ -2.11
ECHDC1-201ENST00000368287 TMCO2Q7Z6W1 182 aaPredicted RBP1.88□□□□□ -2.11
ECHDC1-201ENST00000368287 APRG1Q8IVJ8 170 aa1.88□□□□□ -2.11
ECHDC1-201ENST00000368287 MICU2Q8IYU8 434 aa1.88□□□□□ -2.11
ECHDC1-201ENST00000368287 CMTM8Q8IZV2 173 aa1.88□□□□□ -2.11
ECHDC1-201ENST00000368287 CSGALNACT2Q8N6G5 542 aa1.88□□□□□ -2.11
ECHDC1-201ENST00000368287 GPX8Q8TED1 209 aa1.88□□□□□ -2.11
ECHDC1-201ENST00000368287 GHSRQ92847 366 aa1.88□□□□□ -2.11
ECHDC1-201ENST00000368287 RMI2Q96E14 147 aa1.88□□□□□ -2.11
ECHDC1-201ENST00000368287 JSRP1Q96MG2 331 aaPredicted RBP1.88□□□□□ -2.11
ECHDC1-201ENST00000368287 OPALINQ96PE5 141 aa1.88□□□□□ -2.11
ECHDC1-201ENST00000368287 LZTS2Q9BRK4 669 aa1.88□□□□□ -2.11
ECHDC1-201ENST00000368287 RRAGDQ9NQL2 400 aaPredicted RBP1.88□□□□□ -2.11
ECHDC1-201ENST00000368287 SIGLEC9Q9Y336 463 aa1.88□□□□□ -2.11
ECHDC1-201ENST00000368287 WIF1Q9Y5W5 379 aa1.88□□□□□ -2.11
ECHDC1-201ENST00000368287 AHDC1Q5TGY3 1603 aaPredicted RBP1.88□□□□□ -2.11
ECHDC1-201ENST00000368287 IGHV3OR16-9A0A0B4J2B5 98 aa1.87□□□□□ -2.11
ECHDC1-201ENST00000368287 H0YIV9 168 aa1.87□□□□□ -2.11
ECHDC1-201ENST00000368287 RPL36A-HNRNPH2H7BZ11 118 aa1.87□□□□□ -2.11
ECHDC1-201ENST00000368287 H7C0C1 242 aa1.87□□□□□ -2.11
ECHDC1-201ENST00000368287 RRP8O43159 456 aaKnown RBP1.87□□□□□ -2.11
ECHDC1-201ENST00000368287 SLC16A7O60669 478 aa1.87□□□□□ -2.11
ECHDC1-201ENST00000368287 TGM6O95932 706 aa1.87□□□□□ -2.11
ECHDC1-201ENST00000368287 CD5P06127 495 aa1.87□□□□□ -2.11
ECHDC1-201ENST00000368287 C1GALT1C1LP0DN25 315 aa1.87□□□□□ -2.11
ECHDC1-201ENST00000368287 ZNF14P17017 642 aaPredicted RBP1.87□□□□□ -2.11
ECHDC1-201ENST00000368287 OR1G1P47890 313 aa1.87□□□□□ -2.11
ECHDC1-201ENST00000368287 RAB11AP62491 216 aa1.87□□□□□ -2.11
ECHDC1-201ENST00000368287 PITPNAQ00169 270 aa1.87□□□□□ -2.11
ECHDC1-201ENST00000368287 SIGLEC14Q08ET2 396 aa1.87□□□□□ -2.11
ECHDC1-201ENST00000368287 ZNF816Q0VGE8 651 aaPredicted RBP1.87□□□□□ -2.11
ECHDC1-201ENST00000368287 TSC22D1Q15714 1073 aa1.87□□□□□ -2.11
ECHDC1-201ENST00000368287 RAB11BQ15907 218 aa1.87□□□□□ -2.11
ECHDC1-201ENST00000368287 BEX5Q5H9J7 111 aa1.87□□□□□ -2.11
ECHDC1-201ENST00000368287 KPRPQ5T749 579 aaPredicted RBP1.87□□□□□ -2.11
ECHDC1-201ENST00000368287 PLCXD3Q63HM9 321 aa1.87□□□□□ -2.11
ECHDC1-201ENST00000368287 TMEM256Q8N2U0 113 aa1.87□□□□□ -2.11
ECHDC1-201ENST00000368287 KIF2BQ8N4N8 673 aa1.87□□□□□ -2.11
ECHDC1-201ENST00000368287 TRAM1L1Q8N609 369 aa1.87□□□□□ -2.11
ECHDC1-201ENST00000368287 TTLQ8NG68 377 aa1.87□□□□□ -2.11
ECHDC1-201ENST00000368287 LILRB4Q8NHJ6 448 aa1.87□□□□□ -2.11
ECHDC1-201ENST00000368287 C17orf50Q8WW18 174 aa1.87□□□□□ -2.11
ECHDC1-201ENST00000368287 KIAA1143Q96AT1 154 aaPredicted RBP1.87□□□□□ -2.11
ECHDC1-201ENST00000368287 HAUS1Q96CS2 278 aa1.87□□□□□ -2.11
ECHDC1-201ENST00000368287 KCNS1Q96KK3 526 aa1.87□□□□□ -2.11
ECHDC1-201ENST00000368287 CDX2Q99626 313 aaPredicted RBP1.87□□□□□ -2.11
ECHDC1-201ENST00000368287 OSBPL11Q9BXB4 747 aa1.87□□□□□ -2.11
ECHDC1-201ENST00000368287 RPRD1BQ9NQG5 326 aaKnown RBP1.87□□□□□ -2.11
ECHDC1-201ENST00000368287 FBXO8Q9NRD0 319 aa1.87□□□□□ -2.11
ECHDC1-201ENST00000368287 RBFOX1Q9NWB1 397 aaKnown RBP1.87□□□□□ -2.11
ECHDC1-201ENST00000368287 CAB39Q9Y376 341 aaPredicted RBP1.87□□□□□ -2.11
ECHDC1-201ENST00000368287 TMEM120BA0PK00 339 aa1.86□□□□□ -2.11
ECHDC1-201ENST00000368287 OR5H1A6NKK0 313 aa1.86□□□□□ -2.11
ECHDC1-201ENST00000368287 ZNF850A8MQ14 1090 aa1.86□□□□□ -2.11
ECHDC1-201ENST00000368287 A8MUU9 505 aa1.86□□□□□ -2.11
ECHDC1-201ENST00000368287 CDC40O60508 579 aaKnown RBP eCLIP1.86□□□□□ -2.11
ECHDC1-201ENST00000368287 CATP04040 527 aaKnown RBP1.86□□□□□ -2.11
ECHDC1-201ENST00000368287 IL4P05112 153 aa1.86□□□□□ -2.11
ECHDC1-201ENST00000368287 DCNP07585 359 aaKnown RBP1.86□□□□□ -2.11
ECHDC1-201ENST00000368287 ME2P23368 584 aa1.86□□□□□ -2.11
ECHDC1-201ENST00000368287 GPR1P46091 355 aa1.86□□□□□ -2.11
ECHDC1-201ENST00000368287 UBE2E1P51965 193 aa1.86□□□□□ -2.11
ECHDC1-201ENST00000368287 ZNF33AQ06730 810 aa1.86□□□□□ -2.11
ECHDC1-201ENST00000368287 SPAG1Q07617 926 aa1.86□□□□□ -2.11
ECHDC1-201ENST00000368287 KRTAP13-2Q52LG2 175 aa1.86□□□□□ -2.11
ECHDC1-201ENST00000368287 KDM4DQ6B0I6 523 aa1.86□□□□□ -2.11
ECHDC1-201ENST00000368287 WDR82Q6UXN9 313 aa1.86□□□□□ -2.11
ECHDC1-201ENST00000368287 LINC00336Q6ZUF6 198 aa1.86□□□□□ -2.11
ECHDC1-201ENST00000368287 SLC25A46Q96AG3 418 aa1.86□□□□□ -2.11
ECHDC1-201ENST00000368287 CERS2Q96G23 380 aa1.86□□□□□ -2.11
ECHDC1-201ENST00000368287 BTN2A3PQ96KV6 586 aa1.86□□□□□ -2.11
ECHDC1-201ENST00000368287 UBE2E2Q96LR5 201 aa1.86□□□□□ -2.11
ECHDC1-201ENST00000368287 SCGB3A2Q96PL1 93 aa1.86□□□□□ -2.11
ECHDC1-201ENST00000368287 DOK1Q99704 481 aa1.86□□□□□ -2.11
ECHDC1-201ENST00000368287 ANP32EQ9BTT0 268 aa1.86□□□□□ -2.11
ECHDC1-201ENST00000368287 CALN1Q9BXU9 219 aa1.86□□□□□ -2.11
ECHDC1-201ENST00000368287 CYP3A43Q9HB55 503 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms